Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9d17
         (688 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23523-1|AAC46560.2|  305|Caenorhabditis elegans Hypothetical pr...    30   1.8  
U40935-1|AAA81687.1| 1131|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z81067-5|CAD92378.1|  965|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z99269-2|CAI79215.1|  147|Caenorhabditis elegans Hypothetical pr...    29   4.1  
Z81503-1|CAB04111.1|  305|Caenorhabditis elegans Hypothetical pr...    29   4.1  
AL032646-10|CAA21681.1|  725|Caenorhabditis elegans Hypothetical...    28   5.4  
Z48334-2|CAA88309.1|  357|Caenorhabditis elegans Hypothetical pr...    28   7.2  

>U23523-1|AAC46560.2|  305|Caenorhabditis elegans Hypothetical
           protein F53A9.5 protein.
          Length = 305

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
 Frame = -2

Query: 450 NVVPCGVVWRCCLETEAIVDKFLCYDFIIH--IW 355
           N+  CG VW C   T   VD+FL  ++ +H  IW
Sbjct: 132 NIAQCGSVWTCVAVT---VDRFLAVNYPLHSKIW 162


>U40935-1|AAA81687.1| 1131|Caenorhabditis elegans Hypothetical
           protein F31E3.4 protein.
          Length = 1131

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 13/65 (20%), Positives = 31/65 (47%)
 Frame = +1

Query: 253 EDVSLKKWALCVLMKLGLMTAQGVFKMNEAMSKIPDMNDKIIAEKLIDDCLSLQATTPHD 432
           EDV L +WA  +  ++     +G+ ++++ +S +PD ++       +D  +       +D
Sbjct: 752 EDVDLPEWAHYIPSRIAAQLCEGIVRLSD-VSDLPDYDEPSAVIYELDAMIHAVGNGEND 810

Query: 433 AAWNY 447
             W +
Sbjct: 811 VNWTH 815


>Z81067-5|CAD92378.1|  965|Caenorhabditis elegans Hypothetical
           protein F23A7.7 protein.
          Length = 965

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 17/66 (25%), Positives = 33/66 (50%)
 Frame = +1

Query: 262 SLKKWALCVLMKLGLMTAQGVFKMNEAMSKIPDMNDKIIAEKLIDDCLSLQATTPHDAAW 441
           +LKKW   +L   G +  Q    M E + +   M+  I+ +KL+D+    +     ++++
Sbjct: 206 NLKKWLELILNCYGNIIIQTKKSMFEELPRSCPMSKGILKQKLLDEMADDEMWMHFESSF 265

Query: 442 NYIKCH 459
           + IK H
Sbjct: 266 DGIKVH 271


>Z99269-2|CAI79215.1|  147|Caenorhabditis elegans Hypothetical
           protein W10C6.2 protein.
          Length = 147

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -2

Query: 420 CCLETEAIVDKFLCYDFIIHIWNLRHGFVHFEH 322
           C  +T  + ++FL  DF+I + NL   F+  EH
Sbjct: 93  CAADTHQVPEEFL--DFVIPVTNLTDAFMRIEH 123


>Z81503-1|CAB04111.1|  305|Caenorhabditis elegans Hypothetical
           protein F14F7.1 protein.
          Length = 305

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 13/22 (59%), Positives = 13/22 (59%)
 Frame = +3

Query: 159 PGPESIPG*LCGGRPGQAGFSG 224
           PGP   PG   GGRPG AG  G
Sbjct: 232 PGPAGHPGSSGGGRPGPAGPKG 253


>AL032646-10|CAA21681.1|  725|Caenorhabditis elegans Hypothetical
           protein Y54E2A.11a protein.
          Length = 725

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 17/86 (19%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
 Frame = +1

Query: 94  DYYYDIVTRDPDDLMREKENEVRALRAFQADCAEDVQVKPDLVVNLKSGDWQTEDVSLKK 273
           D  Y    + P+    E+E ++  +  F+++  E  + +P  + N+K  +W      L  
Sbjct: 314 DEKYFACLKAPEKDKLEREQKINGISIFESEKFELYEGRPVNIENIKQFEWSPTSTVLAY 373

Query: 274 WALC---VLMKLGLMTAQGVFKMNEA 342
           ++ C   V  + GL+    + ++  A
Sbjct: 374 YSECTDAVPAEFGLLQVPSMQRLRSA 399


>Z48334-2|CAA88309.1|  357|Caenorhabditis elegans Hypothetical
           protein F10B5.2 protein.
          Length = 357

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = +1

Query: 4   PFKMGASKEM-RSFVILLNYGLLCCGQFMPEDYYYDIVTRD 123
           P  +G+ KE+  SF+ +L + L  C    P D++ DIV+RD
Sbjct: 275 PNSLGSEKELFMSFIRVLFFQLKEC----PTDFFVDIVSRD 311


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,376,924
Number of Sequences: 27780
Number of extensions: 321455
Number of successful extensions: 760
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 760
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)