Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9d16
(660 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC006969-1|AAH06969.1| 352|Homo sapiens dynein, cytoplasmic 2, ... 60 5e-10
AY083346-1|AAL99216.1| 351|Homo sapiens dynein 2 light intermed... 60 5e-10
AK223432-1|BAD97152.1| 351|Homo sapiens dynein 2 light intermed... 60 5e-10
AC011242-2|AAY14702.1| 352|Homo sapiens unknown protein. 60 5e-10
AF151818-1|AAD34055.1| 350|Homo sapiens CGI-60 protein protein. 60 5e-10
AL050006-1|CAB43233.1| 318|Homo sapiens hypothetical protein pr... 60 5e-10
BC016324-1|AAH16324.1| 201|Homo sapiens dynein, cytoplasmic 2, ... 60 7e-09
BC058823-1|AAH58823.1| 201|Homo sapiens dynein, cytoplasmic 2, ... 57 6e-08
BC040558-1|AAH40558.1| 144|Homo sapiens DYNC2LI1 protein protein. 46 2e-04
AL513550-2|CAI17192.1| 772|Homo sapiens ubiquitin specific pept... 32 2.1
AL137784-3|CAI19761.1| 772|Homo sapiens ubiquitin specific pept... 32 2.1
AJ583819-1|CAE47746.2| 814|Homo sapiens ubiquitin specific prot... 32 2.1
>BC006969-1|AAH06969.1| 352|Homo sapiens dynein, cytoplasmic 2,
light intermediate chain 1 protein.
Length = 352
Score = 60.1 bits (139), Expect(2) = 5e-10
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 2/107 (1%)
Frame = +3
Query: 246 GKSTLLHMFLEKLETPRNTLVLEYSFGRKTNLKQAIDKNVCHIWEYGGKLDMLKNV-LPV 422
GK+T++ L++ E P+ TL LEY++GR+ K++ H WE GG +L + +P+
Sbjct: 43 GKTTIILRCLDRDEPPKPTLALEYTYGRRAK-GHNTPKDIAHFWELGGGTSLLDLISIPI 101
Query: 423 LPKT-KNYYYCIMVDLSKPKTLLQTIEICLHAINETQSISDNCVTNL 560
T + + +++DLSKP L T+E L A T+S D + L
Sbjct: 102 TGDTLRTFSLVLVLDLSKPNDLWPTMENLLQA---TKSHVDKVIMKL 145
Score = 23.8 bits (49), Expect(2) = 5e-10
Identities = 8/16 (50%), Positives = 14/16 (87%)
Frame = +3
Query: 558 LIILCGKYDLFKNFET 605
L+I+ KYD+F++FE+
Sbjct: 182 LVIIGSKYDVFQDFES 197
>AY083346-1|AAL99216.1| 351|Homo sapiens dynein 2 light
intermediate chain protein.
Length = 351
Score = 60.1 bits (139), Expect(2) = 5e-10
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 2/107 (1%)
Frame = +3
Query: 246 GKSTLLHMFLEKLETPRNTLVLEYSFGRKTNLKQAIDKNVCHIWEYGGKLDMLKNV-LPV 422
GK+T++ L++ E P+ TL LEY++GR+ K++ H WE GG +L + +P+
Sbjct: 43 GKTTIILRCLDRDEPPKPTLALEYTYGRRAK-GHNTPKDIAHFWELGGGTSLLDLISIPI 101
Query: 423 LPKT-KNYYYCIMVDLSKPKTLLQTIEICLHAINETQSISDNCVTNL 560
T + + +++DLSKP L T+E L A T+S D + L
Sbjct: 102 TGDTLRTFSLVLVLDLSKPNDLWPTMENLLQA---TKSHVDKVIMKL 145
Score = 23.8 bits (49), Expect(2) = 5e-10
Identities = 8/16 (50%), Positives = 14/16 (87%)
Frame = +3
Query: 558 LIILCGKYDLFKNFET 605
L+I+ KYD+F++FE+
Sbjct: 181 LVIIGSKYDVFQDFES 196
>AK223432-1|BAD97152.1| 351|Homo sapiens dynein 2 light
intermediate chain isoform 1 variant protein.
Length = 351
Score = 60.1 bits (139), Expect(2) = 5e-10
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 2/107 (1%)
Frame = +3
Query: 246 GKSTLLHMFLEKLETPRNTLVLEYSFGRKTNLKQAIDKNVCHIWEYGGKLDMLKNV-LPV 422
GK+T++ L++ E P+ TL LEY++GR+ K++ H WE GG +L + +P+
Sbjct: 43 GKTTIILRCLDRDEPPKPTLALEYTYGRRAK-GHNTPKDIAHFWELGGGTSLLDLISIPI 101
Query: 423 LPKT-KNYYYCIMVDLSKPKTLLQTIEICLHAINETQSISDNCVTNL 560
T + + +++DLSKP L T+E L A T+S D + L
Sbjct: 102 TGDTLRTFSLVLVLDLSKPNDLWPTMENLLQA---TKSHVDKVIMKL 145
Score = 23.8 bits (49), Expect(2) = 5e-10
Identities = 8/16 (50%), Positives = 14/16 (87%)
Frame = +3
Query: 558 LIILCGKYDLFKNFET 605
L+I+ KYD+F++FE+
Sbjct: 181 LVIIGSKYDVFQDFES 196
>AC011242-2|AAY14702.1| 352|Homo sapiens unknown protein.
Length = 352
Score = 60.1 bits (139), Expect(2) = 5e-10
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 2/107 (1%)
Frame = +3
Query: 246 GKSTLLHMFLEKLETPRNTLVLEYSFGRKTNLKQAIDKNVCHIWEYGGKLDMLKNV-LPV 422
GK+T++ L++ E P+ TL LEY++GR+ K++ H WE GG +L + +P+
Sbjct: 43 GKTTIILRCLDRDEPPKPTLALEYTYGRRAK-GHNTPKDIAHFWELGGGTSLLDLISIPI 101
Query: 423 LPKT-KNYYYCIMVDLSKPKTLLQTIEICLHAINETQSISDNCVTNL 560
T + + +++DLSKP L T+E L A T+S D + L
Sbjct: 102 TGDTLRTFSLVLVLDLSKPNDLWPTMENLLQA---TKSHVDKVIMKL 145
Score = 23.8 bits (49), Expect(2) = 5e-10
Identities = 8/16 (50%), Positives = 14/16 (87%)
Frame = +3
Query: 558 LIILCGKYDLFKNFET 605
L+I+ KYD+F++FE+
Sbjct: 182 LVIIGSKYDVFQDFES 197
>AF151818-1|AAD34055.1| 350|Homo sapiens CGI-60 protein protein.
Length = 350
Score = 60.1 bits (139), Expect(2) = 5e-10
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 2/107 (1%)
Frame = +3
Query: 246 GKSTLLHMFLEKLETPRNTLVLEYSFGRKTNLKQAIDKNVCHIWEYGGKLDMLKNV-LPV 422
GK+T++ L++ E P+ TL LEY++GR+ K++ H WE GG +L + +P+
Sbjct: 43 GKTTIILRCLDRDEPPKPTLALEYTYGRRAK-GHNTPKDIAHFWELGGGTSLLDLISIPI 101
Query: 423 LPKT-KNYYYCIMVDLSKPKTLLQTIEICLHAINETQSISDNCVTNL 560
T + + +++DLSKP L T+E L A T+S D + L
Sbjct: 102 TGDTLRTFSLVLVLDLSKPNDLWPTMENLLQA---TKSHVDKVIMKL 145
Score = 23.8 bits (49), Expect(2) = 5e-10
Identities = 8/16 (50%), Positives = 14/16 (87%)
Frame = +3
Query: 558 LIILCGKYDLFKNFET 605
L+I+ KYD+F++FE+
Sbjct: 180 LVIIGSKYDVFQDFES 195
>AL050006-1|CAB43233.1| 318|Homo sapiens hypothetical protein
protein.
Length = 318
Score = 60.1 bits (139), Expect(2) = 5e-10
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 2/107 (1%)
Frame = +3
Query: 246 GKSTLLHMFLEKLETPRNTLVLEYSFGRKTNLKQAIDKNVCHIWEYGGKLDMLKNV-LPV 422
GK+T++ L++ E P+ TL LEY++GR+ K++ H WE GG +L + +P+
Sbjct: 27 GKTTIILRCLDRDEPPKPTLALEYTYGRRAK-GHNTPKDIAHFWELGGGTSLLDLISIPI 85
Query: 423 LPKT-KNYYYCIMVDLSKPKTLLQTIEICLHAINETQSISDNCVTNL 560
T + + +++DLSKP L T+E L A T+S D + L
Sbjct: 86 TGDTLRTFSLVLVLDLSKPNDLWPTMENLLQA---TKSHVDKVIMKL 129
Score = 23.8 bits (49), Expect(2) = 5e-10
Identities = 8/16 (50%), Positives = 14/16 (87%)
Frame = +3
Query: 558 LIILCGKYDLFKNFET 605
L+I+ KYD+F++FE+
Sbjct: 165 LVIIGSKYDVFQDFES 180
>BC016324-1|AAH16324.1| 201|Homo sapiens dynein, cytoplasmic 2,
light intermediate chain 1 protein.
Length = 201
Score = 60.1 bits (139), Expect = 7e-09
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 2/107 (1%)
Frame = +3
Query: 246 GKSTLLHMFLEKLETPRNTLVLEYSFGRKTNLKQAIDKNVCHIWEYGGKLDMLKNV-LPV 422
GK+T++ L++ E P+ TL LEY++GR+ K++ H WE GG +L + +P+
Sbjct: 43 GKTTIILRCLDRDEPPKPTLALEYTYGRRAK-GHNTPKDIAHFWELGGGTSLLDLISIPI 101
Query: 423 LPKT-KNYYYCIMVDLSKPKTLLQTIEICLHAINETQSISDNCVTNL 560
T + + +++DLSKP L T+E L A T+S D + L
Sbjct: 102 TGDTLRTFSLVLVLDLSKPNDLWPTMENLLQA---TKSHVDKVIMKL 145
>BC058823-1|AAH58823.1| 201|Homo sapiens dynein, cytoplasmic 2,
light intermediate chain 1 protein.
Length = 201
Score = 56.8 bits (131), Expect = 6e-08
Identities = 35/107 (32%), Positives = 58/107 (54%), Gaps = 2/107 (1%)
Frame = +3
Query: 246 GKSTLLHMFLEKLETPRNTLVLEYSFGRKTNLKQAIDKNVCHIWEYGGKLDMLKNV-LPV 422
GK+T++ L++ E + TL LEY++GR+ K++ H WE GG +L + +P+
Sbjct: 43 GKTTIILRCLDRDEPSKPTLALEYTYGRRAK-GHNTPKDIAHFWELGGGTSLLDLISIPI 101
Query: 423 LPKT-KNYYYCIMVDLSKPKTLLQTIEICLHAINETQSISDNCVTNL 560
T + + +++DLSKP L T+E L A T+S D + L
Sbjct: 102 TGDTLRTFSLVLVLDLSKPNDLWPTMENLLQA---TKSHVDKVIMKL 145
>BC040558-1|AAH40558.1| 144|Homo sapiens DYNC2LI1 protein protein.
Length = 144
Score = 45.6 bits (103), Expect = 2e-04
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +3
Query: 246 GKSTLLHMFLEKLETPRNTLVLEYSFGRKTNLKQAIDKNVCHIWEYGGKLDMLKNV-LPV 422
GK+T++ L++ E P+ TL LEY++GR+ K++ H WE GG +L + +P+
Sbjct: 43 GKTTIILRCLDRDEPPKPTLALEYTYGRRAK-GHNTPKDIAHFWELGGGTSLLDLISIPI 101
Query: 423 LPKT 434
T
Sbjct: 102 TGDT 105
>AL513550-2|CAI17192.1| 772|Homo sapiens ubiquitin specific
peptidase 45 protein.
Length = 772
Score = 31.9 bits (69), Expect = 2.1
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +3
Query: 414 LPVLPKTKNYYYCIMVDLSKPKTLLQTIEICLHAINETQS--ISDNCVTNLIILCGKYDL 587
L + P + + ++V+LS+P L + + LH++ ET+ +S + N LC K
Sbjct: 228 LKIFPSSDSQLDPLVVELSRPGPLTSALFLFLHSMKETEKGPLSPKVLFNQ--LCQKAPR 285
Query: 588 FKNFE 602
FK+F+
Sbjct: 286 FKDFQ 290
>AL137784-3|CAI19761.1| 772|Homo sapiens ubiquitin specific
peptidase 45 protein.
Length = 772
Score = 31.9 bits (69), Expect = 2.1
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +3
Query: 414 LPVLPKTKNYYYCIMVDLSKPKTLLQTIEICLHAINETQS--ISDNCVTNLIILCGKYDL 587
L + P + + ++V+LS+P L + + LH++ ET+ +S + N LC K
Sbjct: 228 LKIFPSSDSQLDPLVVELSRPGPLTSALFLFLHSMKETEKGPLSPKVLFNQ--LCQKAPR 285
Query: 588 FKNFE 602
FK+F+
Sbjct: 286 FKDFQ 290
>AJ583819-1|CAE47746.2| 814|Homo sapiens ubiquitin specific
proteinase 45 protein.
Length = 814
Score = 31.9 bits (69), Expect = 2.1
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +3
Query: 414 LPVLPKTKNYYYCIMVDLSKPKTLLQTIEICLHAINETQS--ISDNCVTNLIILCGKYDL 587
L + P + + ++V+LS+P L + + LH++ ET+ +S + N LC K
Sbjct: 228 LKIFPSSDSQLDPLVVELSRPGPLTSALFLFLHSMKETEKGPLSPKVLFNQ--LCQKAPR 285
Query: 588 FKNFE 602
FK+F+
Sbjct: 286 FKDFQ 290
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,436,882
Number of Sequences: 237096
Number of extensions: 1743382
Number of successful extensions: 6146
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 6096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6138
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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