Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9d15
         (565 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y12490-1|CAA73095.1| 1979|Homo sapiens Golgi-associated microtub...    29   8.5  
BX641024-1|CAE46015.1| 1694|Homo sapiens hypothetical protein pr...    29   8.5  
AF007217-1|AAD09135.1| 1978|Homo sapiens Trip230 protein.              29   8.5  

>Y12490-1|CAA73095.1| 1979|Homo sapiens Golgi-associated
            microtubule-binding protein protein.
          Length = 1979

 Score = 29.5 bits (63), Expect = 8.5
 Identities = 12/49 (24%), Positives = 29/49 (59%)
 Frame = +2

Query: 299  RYEHDEVPVRESDLSATTDKDVILTNSELDKIEKRVYETVSQELQTDES 445
            RY+H+++    + L    D+++      +++I+ +++E   Q++QTD S
Sbjct: 944  RYQHEQMNATHTQLFLEKDEEIKSLQKTIEQIKTQLHEE-RQDIQTDNS 991


>BX641024-1|CAE46015.1| 1694|Homo sapiens hypothetical protein
           protein.
          Length = 1694

 Score = 29.5 bits (63), Expect = 8.5
 Identities = 12/49 (24%), Positives = 29/49 (59%)
 Frame = +2

Query: 299 RYEHDEVPVRESDLSATTDKDVILTNSELDKIEKRVYETVSQELQTDES 445
           RY+H+++    + L    D+++      +++I+ +++E   Q++QTD S
Sbjct: 659 RYQHEQMNATHTQLFLEKDEEIKSLQKTIEQIKTQLHEE-RQDIQTDNS 706


>AF007217-1|AAD09135.1| 1978|Homo sapiens Trip230 protein.
          Length = 1978

 Score = 29.5 bits (63), Expect = 8.5
 Identities = 12/49 (24%), Positives = 29/49 (59%)
 Frame = +2

Query: 299  RYEHDEVPVRESDLSATTDKDVILTNSELDKIEKRVYETVSQELQTDES 445
            RY+H+++    + L    D+++      +++I+ +++E   Q++QTD S
Sbjct: 944  RYQHEQMNATHTQLFLEKDEEIKSLQKTIEQIKTQLHEE-RQDIQTDNS 991


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,194,815
Number of Sequences: 237096
Number of extensions: 962547
Number of successful extensions: 2002
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2002
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5703349406
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)