Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9d13
(419 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88173-3|AAK21382.1| 73|Caenorhabditis elegans Ubiquitin-like ... 138 1e-33
U97000-8|AAC47999.1| 347|Caenorhabditis elegans Seven tm recept... 33 0.11
AF003130-1|AAB54124.2| 423|Caenorhabditis elegans Hypothetical ... 29 1.0
Z81528-1|CAB04282.1| 345|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 27 5.5
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 27 5.5
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 27 5.5
Z78062-4|CAB01498.2| 341|Caenorhabditis elegans Hypothetical pr... 27 7.2
U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical p... 27 7.2
AF038604-6|AAB92014.2| 243|Caenorhabditis elegans Hypothetical ... 27 7.2
U80847-4|AAB37986.1| 112|Caenorhabditis elegans Hypothetical pr... 26 9.5
AC024831-12|AAW57824.1| 356|Caenorhabditis elegans Serpentine r... 26 9.5
AC024831-6|AAY86308.1| 351|Caenorhabditis elegans Hypothetical ... 26 9.5
>U88173-3|AAK21382.1| 73|Caenorhabditis elegans Ubiquitin-like
family protein 5 protein.
Length = 73
Score = 138 bits (334), Expect = 1e-33
Identities = 58/73 (79%), Positives = 67/73 (91%)
Frame = +1
Query: 130 MLEVTCNDRLGKKVRVKCNPDDTVGDLKKLIAAQTGTRYDKIVLKKWYTVFKDHIKLADY 309
M+E+T NDRLGKKVR+KCNP DT+GDLKKLIAAQTGTR++KIVLKKWYT++KDHI L DY
Sbjct: 1 MIEITVNDRLGKKVRIKCNPSDTIGDLKKLIAAQTGTRWEKIVLKKWYTIYKDHITLMDY 60
Query: 310 EIHDGMNLELYYQ 348
EIH+G N ELYYQ
Sbjct: 61 EIHEGFNFELYYQ 73
>U97000-8|AAC47999.1| 347|Caenorhabditis elegans Seven tm receptor
protein 136 protein.
Length = 347
Score = 32.7 bits (71), Expect = 0.11
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -2
Query: 151 HCMLLQAFCSQISSQFYYE-IKYINSNFLFVLVVLPPFKIFTAVLIVFIIY 2
HC+L S +S QF+Y + ++ L L F IFT +IVFII+
Sbjct: 99 HCVLTGFVASLLSCQFFYRYVALCKTHLLVYLQGKKLFLIFTPSVIVFIIW 149
>AF003130-1|AAB54124.2| 423|Caenorhabditis elegans Hypothetical
protein F55A12.6 protein.
Length = 423
Score = 29.5 bits (63), Expect = 1.0
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = -2
Query: 253 FCRI*CQFVRLLTSLNHPRYRQGCI*LEPSYRVDHCMLLQAFCSQISSQFYYEIKYINSN 74
+CR+ QFV + S PRY C P+Y+ + C + A S F ++ K ++
Sbjct: 195 YCRV-AQFVDYVGST--PRYYCDCPPYAPNYQWNQCSPMSARALSPMSVFSHKPKLSRNS 251
Query: 73 FLFVL 59
F F L
Sbjct: 252 FFFQL 256
>Z81528-1|CAB04282.1| 345|Caenorhabditis elegans Hypothetical
protein F35E2.1 protein.
Length = 345
Score = 27.9 bits (59), Expect = 3.1
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Frame = -2
Query: 172 EPSYRVDHCMLLQAFCSQISSQFYYEIKYINSNFLFVLVVL-----PPFKIFTAVLI--V 14
+P Y V C L+ FCS +S Y + + S + + +VVL P F I +++ +
Sbjct: 109 QPVYTVFVCSFLKNFCSSTTSA-YQVLPFAVSLYRYRIVVLKGHPSPWFVINVHIIVTTI 167
Query: 13 FIIY 2
FIIY
Sbjct: 168 FIIY 171
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 27.1 bits (57), Expect = 5.5
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 97 HNKTES*FESKMLEVTCNDRLGKKVRVKCNPDDTVG 204
H +T+ FES + E L + + ++C+ DD +G
Sbjct: 2000 HVRTKPRFESGLTESELTVNLTRSITLECDVDDAIG 2035
>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 27.1 bits (57), Expect = 5.5
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 97 HNKTES*FESKMLEVTCNDRLGKKVRVKCNPDDTVG 204
H +T+ FES + E L + + ++C+ DD +G
Sbjct: 2000 HVRTKPRFESGLTESELTVNLTRSITLECDVDDAIG 2035
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 27.1 bits (57), Expect = 5.5
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 97 HNKTES*FESKMLEVTCNDRLGKKVRVKCNPDDTVG 204
H +T+ FES + E L + + ++C+ DD +G
Sbjct: 2000 HVRTKPRFESGLTESELTVNLTRSITLECDVDDAIG 2035
>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 27.1 bits (57), Expect = 5.5
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 97 HNKTES*FESKMLEVTCNDRLGKKVRVKCNPDDTVG 204
H +T+ FES + E L + + ++C+ DD +G
Sbjct: 2000 HVRTKPRFESGLTESELTVNLTRSITLECDVDDAIG 2035
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 27.1 bits (57), Expect = 5.5
Identities = 16/64 (25%), Positives = 26/64 (40%)
Frame = +1
Query: 157 LGKKVRVKCNPDDTVGDLKKLIAAQTGTRYDKIVLKKWYTVFKDHIKLADYEIHDGMNLE 336
LG K + +DTV D+K I + L +DH + DY I +
Sbjct: 161 LGVSYAFKIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDYNIQKSSTIT 220
Query: 337 LYYQ 348
+Y++
Sbjct: 221 MYFR 224
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 27.1 bits (57), Expect = 5.5
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 97 HNKTES*FESKMLEVTCNDRLGKKVRVKCNPDDTVG 204
H +T+ FES + E L + + ++C+ DD +G
Sbjct: 2000 HVRTKPRFESGLTESELTVNLTRSITLECDVDDAIG 2035
>Z78062-4|CAB01498.2| 341|Caenorhabditis elegans Hypothetical
protein F16D3.6 protein.
Length = 341
Score = 26.6 bits (56), Expect = 7.2
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Frame = -2
Query: 172 EPSYRVDHCMLLQAFCSQISSQFYYEIKYINSNFLFVLVVL-----PPFKIFTAVLI--V 14
+P Y V C L+ FCS +S Y + + S + + VVL P F I +++ +
Sbjct: 109 QPVYTVFVCSFLKNFCSSTTSA-YQVLPFAVSLYRYRTVVLKGHPSPWFVINVHIIVTTI 167
Query: 13 FIIY 2
FIIY
Sbjct: 168 FIIY 171
>U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical
protein C16C8.11 protein.
Length = 214
Score = 26.6 bits (56), Expect = 7.2
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +1
Query: 160 GKKVRVKCNPDDTVGDLKKLIAAQTGTRYDKIVLKKWYTVFKDHIKLADYE 312
G+ + N ++V LK I QTG K L+ D KLADY+
Sbjct: 152 GRLFSIGANKMESVEQLKMKIECQTGIPRTKFWLRLHGKPLYDDKKLADYK 202
>AF038604-6|AAB92014.2| 243|Caenorhabditis elegans Hypothetical
protein B0546.5 protein.
Length = 243
Score = 26.6 bits (56), Expect = 7.2
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Frame = -2
Query: 172 EPSYRVDHCMLLQAFCSQISSQFYYEIKYINSNFLFVLVVL-----PPFKIFTAVLI--V 14
+P Y V C L+ FCS +S Y + + S + + VVL P F I +++ +
Sbjct: 109 QPVYTVFVCSFLKNFCSSTTSA-YQVLPFAVSLYRYRTVVLKGHPSPWFVINVHIIVTTI 167
Query: 13 FIIY 2
FIIY
Sbjct: 168 FIIY 171
>U80847-4|AAB37986.1| 112|Caenorhabditis elegans Hypothetical
protein C17H11.5 protein.
Length = 112
Score = 26.2 bits (55), Expect = 9.5
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +1
Query: 187 PDDTVGDLKKLIAAQTGTRYDKIVLKKWYTVFKDHIKLADYEIHDGMNLELY 342
P++ G + + A RYD + +K W I +A +++D M E Y
Sbjct: 26 PENDDGAIIEFSVAMETCRYDYMTIKYWLDY--QRISIAAMKVYDRMKREKY 75
>AC024831-12|AAW57824.1| 356|Caenorhabditis elegans Serpentine
receptor, class t protein23 protein.
Length = 356
Score = 26.2 bits (55), Expect = 9.5
Identities = 10/44 (22%), Positives = 21/44 (47%)
Frame = -3
Query: 309 IVCKFNMILEYCVPFLEYYFVVSSASLCGY*LL*ITHGIVRVAF 178
++C FN I Y ++++++ + L G HG V + +
Sbjct: 255 LICSFNAIAAYIYVYMQFFYSPPAVVLVGQLAWQCAHGSVCIVY 298
>AC024831-6|AAY86308.1| 351|Caenorhabditis elegans Hypothetical
protein Y55F3C.10 protein.
Length = 351
Score = 26.2 bits (55), Expect = 9.5
Identities = 10/44 (22%), Positives = 21/44 (47%)
Frame = -3
Query: 309 IVCKFNMILEYCVPFLEYYFVVSSASLCGY*LL*ITHGIVRVAF 178
++C FN I Y ++++++ + L G HG V + +
Sbjct: 251 LICSFNAIAAYIYVYMQFFYSPPAVVLIGQLAWQCAHGSVCIVY 294
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,749,295
Number of Sequences: 27780
Number of extensions: 119119
Number of successful extensions: 399
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 389
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 398
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 682028672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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