Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9d07
         (747 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           25   0.85 
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    25   0.85 
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    25   0.85 
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   3.4  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    22   6.0  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    22   6.0  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   7.9  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   7.9  

>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 14/61 (22%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
 Frame = +1

Query: 172 HNDYQWPFPKPIVGKPCEPPTPSGAPPAQRAPVAPYCHCDAH-----SYSPRVEQYKQLL 336
           +  YQ   P P   +    PTPS +  +  +  + Y +   H     +Y P+  + ++LL
Sbjct: 184 YQSYQILLPTPTCSEASSSPTPSHSSESSFSAASSYTNTIYHQENFENYEPKSPEDEELL 243

Query: 337 E 339
           +
Sbjct: 244 D 244


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 9/31 (29%), Positives = 19/31 (61%)
 Frame = +2

Query: 8   SSLFEEIFIQFKFLASKVILNYVGCQIARLV 100
           + +F   F+ F   +S ++L+YV C +A ++
Sbjct: 275 NDIFGWSFLLFTLYSSLLLLDYVSCVVALII 305


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 9/31 (29%), Positives = 19/31 (61%)
 Frame = +2

Query: 8   SSLFEEIFIQFKFLASKVILNYVGCQIARLV 100
           + +F   F+ F   +S ++L+YV C +A ++
Sbjct: 201 NDIFGWSFLLFTLYSSLLLLDYVSCVVALII 231


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +1

Query: 196 PKPIVGKPCEPPTPSGAPPAQRAP 267
           P+P   +P   P+  G+ P Q  P
Sbjct: 408 PRPEWARPPSTPSADGSKPVQTTP 431


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -3

Query: 571 SEGGQDDSTPQES 533
           SEGG DD +PQ S
Sbjct: 309 SEGGGDDISPQGS 321


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -3

Query: 571 SEGGQDDSTPQES 533
           SEGG DD +PQ S
Sbjct: 311 SEGGGDDISPQGS 323


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +1

Query: 217 PCEPPTPSGAPPAQR 261
           P  PPTPS  PP +R
Sbjct: 95  PTTPPTPS-PPPEER 108


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 732 RCAIRVHVLSPAGKLREPSL 673
           RC+ RV  L+P  K+  P +
Sbjct: 816 RCSSRVESLTPERKMEPPGV 835


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,169
Number of Sequences: 336
Number of extensions: 3407
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)