Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9d06
         (710 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   2.5  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   3.2  
EF222289-1|ABN79649.1|   68|Tribolium castaneum adipokinetic hor...    22   5.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.9  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   9.9  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -2

Query: 157 VNTSSNYANYNFCEFDFYYAMSFFQLLI 74
           +N   N  NYNF +  ++  M    LLI
Sbjct: 40  INIRKNGLNYNFTKKCYFLRMVLIDLLI 67


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/43 (23%), Positives = 26/43 (60%)
 Frame = +3

Query: 528 LFMYSLSIINGYSV*CIVYMLTVIIIIHINSCFFVYYLYLFLI 656
           +F + + +++ Y+   I+ + +V+ I+ I+   +  +LY F+I
Sbjct: 104 VFFWVIILMSNYAFTRIILLKSVLEIVIIDIEIYSQFLYGFMI 146


>EF222289-1|ABN79649.1|   68|Tribolium castaneum adipokinetic
           hormone 2 protein.
          Length = 68

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +2

Query: 95  HRVIKIELAKIIICVITGRIYLP*SWNSFQFEGWSSRC 208
           HRV+   L   I+ +   ++    +W     EG S+RC
Sbjct: 2   HRVLLTVLLITIVGLCAAQLNFTPNWGKRAPEGESNRC 39


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 435  SMLFFCGSPNFIIA 394
            S+ FFC +  FIIA
Sbjct: 978  SLFFFCMAAEFIIA 991


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 435  SMLFFCGSPNFIIA 394
            S+ FFC +  FIIA
Sbjct: 978  SLFFFCMAAEFIIA 991


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 460 LYADQINDFNAVFLW 416
           L AD + +FN +F W
Sbjct: 162 LLADNVANFNKIFGW 176


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,755
Number of Sequences: 336
Number of extensions: 3506
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)