Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9c24
         (593 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   1.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   1.5  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   2.6  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    22   3.4  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    22   4.5  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    21   5.9  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    21   5.9  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    21   5.9  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   7.8  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 12/45 (26%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
 Frame = -3

Query: 228 TAIFSCRTRMKSAMLSARESMTAVYRIYEEFCNETTLH---GLKH 103
           T I++C T          E + +V+R+ ++ C+   +    GLKH
Sbjct: 533 TRIYACGTMWHETPEEMMEFLKSVFRLDQDQCSHRIVREHLGLKH 577


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 12/45 (26%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
 Frame = -3

Query: 228 TAIFSCRTRMKSAMLSARESMTAVYRIYEEFCNETTLH---GLKH 103
           T I++C T          E + +V+R+ ++ C+   +    GLKH
Sbjct: 533 TRIYACGTMWHETPEEMMEFLKSVFRLDQDQCSHRIVREHLGLKH 577


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 11/42 (26%), Positives = 17/42 (40%)
 Frame = -1

Query: 161 LCTEYTRNSAMKRPYTASNILSRRACIGLRGKNNNIEIYYCF 36
           +C+E  R    KR    +   +  +C     +NN  E   CF
Sbjct: 364 ICSESNRKFYFKRARNGTFSTTANSCRSSTFRNNRDEYNVCF 405


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +2

Query: 386 KVPEPKHGRRGRKPQRRCPD 445
           + P PKH  RGR  +R   D
Sbjct: 213 RTPRPKHDGRGRIVERFTSD 232


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 147 YEEFCNETTLHGLKHTVEKS 88
           YE+ CNE T H +    E+S
Sbjct: 165 YEQACNEFTTHVMNLLREQS 184


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
          protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 80 GLRGKNNNIEIYYCF 36
          G  GKN N E ++CF
Sbjct: 15 GKVGKNFNNEAFFCF 29


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
          protein.
          Length = 510

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 80 GLRGKNNNIEIYYCF 36
          G  GKN N E ++CF
Sbjct: 15 GKVGKNFNNEAFFCF 29


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
          protein.
          Length = 509

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 80 GLRGKNNNIEIYYCF 36
          G  GKN N E ++CF
Sbjct: 14 GKVGKNFNNEAFFCF 28


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -1

Query: 77  LRGKNNNIEIYYCF*FTSNFQPRPY 3
           L   NN ++I     ++SN   RPY
Sbjct: 440 LERANNGVKIPLVIIWSSNLSKRPY 464


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,745
Number of Sequences: 336
Number of extensions: 2938
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14935063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)