Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9c23
(550 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF251006-1|AAK28427.1| 1500|Drosophila melanogaster host cell fa... 31 0.78
BT015268-1|AAT94497.1| 1500|Drosophila melanogaster LD29768p pro... 30 1.8
AY060983-1|AAL28531.1| 883|Drosophila melanogaster GM14007p pro... 30 1.8
AJ320236-1|CAC44472.1| 1500|Drosophila melanogaster host cell fa... 30 1.8
AE014135-74|AAS64608.1| 1500|Drosophila melanogaster CG1710-PD, ... 30 1.8
AE014135-73|AAN06530.1| 1500|Drosophila melanogaster CG1710-PC, ... 30 1.8
AE014135-72|AAN06529.1| 1500|Drosophila melanogaster CG1710-PB, ... 30 1.8
AE014135-71|AAF59349.2| 1500|Drosophila melanogaster CG1710-PA, ... 30 1.8
X75886-1|CAA53480.1| 621|Drosophila melanogaster nuclear lamin ... 28 7.2
L07933-1|AAA28666.1| 621|Drosophila melanogaster lamin C like p... 28 9.6
AY128428-1|AAM75021.1| 686|Drosophila melanogaster GH26549p pro... 28 9.6
AY095046-1|AAM11374.1| 621|Drosophila melanogaster LD31805p pro... 28 9.6
AF529189-1|AAN31661.1| 686|Drosophila melanogaster protein tyro... 28 9.6
AF126741-1|AAK14909.1| 429|Drosophila melanogaster IA2 protein. 28 9.6
AE014134-188|AAF51427.3| 1144|Drosophila melanogaster CG31795-PA... 28 9.6
AE013599-1908|AAF58237.1| 621|Drosophila melanogaster CG10119-P... 28 9.6
>AF251006-1|AAK28427.1| 1500|Drosophila melanogaster host cell factor
HCF protein.
Length = 1500
Score = 31.5 bits (68), Expect = 0.78
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -2
Query: 351 GHDLVVVPGRVVAPSGRRTVALSLKVDISLEPGGVPRSISLA 226
G+ ++V+PG S T ALS K GG PR+++LA
Sbjct: 932 GNKVMVLPGTSSNNSPATTTALSAKKSFVFNAGGSPRTVTLA 973
>BT015268-1|AAT94497.1| 1500|Drosophila melanogaster LD29768p protein.
Length = 1500
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -2
Query: 351 GHDLVVVPGRVVAPSGRRTVALSLKVDISLEPGGVPRSISLA 226
G+ ++V+PG S T ALS + GG PR+++LA
Sbjct: 932 GNKVMVLPGTSSNNSPATTTALSARKSFVFNAGGSPRTVTLA 973
>AY060983-1|AAL28531.1| 883|Drosophila melanogaster GM14007p
protein.
Length = 883
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -2
Query: 351 GHDLVVVPGRVVAPSGRRTVALSLKVDISLEPGGVPRSISLA 226
G+ ++V+PG S T ALS + GG PR+++LA
Sbjct: 315 GNKVMVLPGTSSNNSPATTTALSARKSFVFNAGGSPRTVTLA 356
>AJ320236-1|CAC44472.1| 1500|Drosophila melanogaster host cell factor
protein.
Length = 1500
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -2
Query: 351 GHDLVVVPGRVVAPSGRRTVALSLKVDISLEPGGVPRSISLA 226
G+ ++V+PG S T ALS + GG PR+++LA
Sbjct: 932 GNKVMVLPGTSSNNSPATTTALSARKSFVFNAGGSPRTVTLA 973
>AE014135-74|AAS64608.1| 1500|Drosophila melanogaster CG1710-PD,
isoform D protein.
Length = 1500
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -2
Query: 351 GHDLVVVPGRVVAPSGRRTVALSLKVDISLEPGGVPRSISLA 226
G+ ++V+PG S T ALS + GG PR+++LA
Sbjct: 932 GNKVMVLPGTSSNNSPATTTALSARKSFVFNAGGSPRTVTLA 973
>AE014135-73|AAN06530.1| 1500|Drosophila melanogaster CG1710-PC,
isoform C protein.
Length = 1500
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -2
Query: 351 GHDLVVVPGRVVAPSGRRTVALSLKVDISLEPGGVPRSISLA 226
G+ ++V+PG S T ALS + GG PR+++LA
Sbjct: 932 GNKVMVLPGTSSNNSPATTTALSARKSFVFNAGGSPRTVTLA 973
>AE014135-72|AAN06529.1| 1500|Drosophila melanogaster CG1710-PB,
isoform B protein.
Length = 1500
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -2
Query: 351 GHDLVVVPGRVVAPSGRRTVALSLKVDISLEPGGVPRSISLA 226
G+ ++V+PG S T ALS + GG PR+++LA
Sbjct: 932 GNKVMVLPGTSSNNSPATTTALSARKSFVFNAGGSPRTVTLA 973
>AE014135-71|AAF59349.2| 1500|Drosophila melanogaster CG1710-PA,
isoform A protein.
Length = 1500
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -2
Query: 351 GHDLVVVPGRVVAPSGRRTVALSLKVDISLEPGGVPRSISLA 226
G+ ++V+PG S T ALS + GG PR+++LA
Sbjct: 932 GNKVMVLPGTSSNNSPATTTALSARKSFVFNAGGSPRTVTLA 973
>X75886-1|CAA53480.1| 621|Drosophila melanogaster nuclear lamin C
protein protein.
Length = 621
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +1
Query: 310 RRNHTAGHHDKIMAAKKKPDDEQKDKGLENAR 405
R N G +++ +A +KK +D+ K+ LEN R
Sbjct: 155 RYNEVNGKYNQALADRKKFEDQAKELALENER 186
>L07933-1|AAA28666.1| 621|Drosophila melanogaster lamin C like
protein protein.
Length = 621
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +1
Query: 310 RRNHTAGHHDKIMAAKKKPDDEQKDKGLENAR 405
R N G +++ +A +KK +D+ K+ LEN R
Sbjct: 155 RYNEVNGKYNQSLADRKKFEDQAKELALENER 186
>AY128428-1|AAM75021.1| 686|Drosophila melanogaster GH26549p
protein.
Length = 686
Score = 27.9 bits (59), Expect = 9.6
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +1
Query: 286 KRDRATAARRNHTAGHHDKIMAAKKKPDDEQKDKGLENARDGDK 417
K D+A A K AA KK ++ KDK + A+D K
Sbjct: 627 KEDKAQEAAEEEAPTSSSKAAAAAKKEKEKDKDKEEKQAKDQAK 670
>AY095046-1|AAM11374.1| 621|Drosophila melanogaster LD31805p
protein.
Length = 621
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +1
Query: 310 RRNHTAGHHDKIMAAKKKPDDEQKDKGLENAR 405
R N G +++ +A +KK +D+ K+ LEN R
Sbjct: 155 RYNEVNGKYNQSLADRKKFEDQAKELALENER 186
>AF529189-1|AAN31661.1| 686|Drosophila melanogaster protein
tyrosine phosphatase-likeprotein protein.
Length = 686
Score = 27.9 bits (59), Expect = 9.6
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +1
Query: 286 KRDRATAARRNHTAGHHDKIMAAKKKPDDEQKDKGLENARDGDK 417
K D+A A K AA KK ++ KDK + A+D K
Sbjct: 627 KEDKAQEAAEEEAPTSSSKAAAAAKKEKEKDKDKEEKQAKDQAK 670
>AF126741-1|AAK14909.1| 429|Drosophila melanogaster IA2 protein.
Length = 429
Score = 27.9 bits (59), Expect = 9.6
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +1
Query: 286 KRDRATAARRNHTAGHHDKIMAAKKKPDDEQKDKGLENARDGDK 417
K D+A A K AA KK ++ KDK + A+D K
Sbjct: 370 KEDKAQEAAEEEAPTSSSKAAAAAKKEKEKDKDKEEKQAKDQAK 413
>AE014134-188|AAF51427.3| 1144|Drosophila melanogaster CG31795-PA,
isoform A protein.
Length = 1144
Score = 27.9 bits (59), Expect = 9.6
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +1
Query: 286 KRDRATAARRNHTAGHHDKIMAAKKKPDDEQKDKGLENARDGDK 417
K D+A A K AA KK ++ KDK + A+D K
Sbjct: 1085 KEDKAQEAAEEEAPTSSSKAAAAAKKEKEKDKDKEEKQAKDQAK 1128
>AE013599-1908|AAF58237.1| 621|Drosophila melanogaster CG10119-PA
protein.
Length = 621
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +1
Query: 310 RRNHTAGHHDKIMAAKKKPDDEQKDKGLENAR 405
R N G +++ +A +KK +D+ K+ LEN R
Sbjct: 155 RYNEVNGKYNQSLADRKKFEDQAKELALENER 186
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,437,106
Number of Sequences: 53049
Number of extensions: 345010
Number of successful extensions: 1543
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1541
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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