Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9c16
         (386 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83231-4|CAB05752.1|  356|Caenorhabditis elegans Hypothetical pr...    27   6.1  
U55365-5|AAN84867.2|  350|Caenorhabditis elegans Serpentine rece...    26   8.1  

>Z83231-4|CAB05752.1|  356|Caenorhabditis elegans Hypothetical
           protein F57G9.4 protein.
          Length = 356

 Score = 26.6 bits (56), Expect = 6.1
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +2

Query: 197 TYYFYLVL*IVQLFSIIL*KFQIQNNIY 280
           T+ F LVL IV+LFS ++  + +  NIY
Sbjct: 20  TFNFQLVLSIVELFSYLICAYILTLNIY 47


>U55365-5|AAN84867.2|  350|Caenorhabditis elegans Serpentine
           receptor, class e (epsilon)protein 11 protein.
          Length = 350

 Score = 26.2 bits (55), Expect = 8.1
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = +1

Query: 118 CQVIFGCFKSHRQFNYKALKAL*LSVNLLFLSCTVNCTII*YNPIEVSNT 267
           C +I  CF ++   NY+      +S++L+FL  T   TI  Y     SNT
Sbjct: 117 CMIIERCFATYFVENYEKKPRKYISISLIFLLITFG-TISCYFLRNASNT 165


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,095,368
Number of Sequences: 27780
Number of extensions: 120985
Number of successful extensions: 213
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 213
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 576961812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)