Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9c11
         (768 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.     26   1.1  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    26   1.5  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    24   4.5  
EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton anti...    23   7.9  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   7.9  

>AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.
          Length = 392

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
 Frame = -3

Query: 631 FFGISGKGYRPS-GEVEIVFPDRLQIRILVVHGRVQSVNEFQIFRTVRSSICSHYEENSS 455
           + G  GK +  S G+ E    D + ++ + VHG V  +     ++ +R +I   +     
Sbjct: 250 YVGSMGKEWTTSAGDFET--HDPMYVKAVTVHGEVYHLTWINHYKAIRKAIGIEWPGYMI 307

Query: 454 YTADASEEAH*SFYF 410
           + + A  E H  ++F
Sbjct: 308 HESGAWSEVHRRWFF 322


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +1

Query: 319  CNGLYRYQNRLLCNSIDLPIHNPTWLSFNGRSKN 420
            C GL +Y +  L   +D+  H+  + S+NG  +N
Sbjct: 2444 CEGLSKYVSYGLLKLLDINPHSSLFRSYNGPFRN 2477


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = -2

Query: 485 HMLALRRKQ*LYSRCLRRSALKFLLLPLKESHVGLCIGRSM 363
           H+L L+  + L +R  R  A++ +      SHV +C+  SM
Sbjct: 771 HVLVLKENRQLANRVHRLLAMRVVRAYKTISHVAVCVIASM 811


>EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton
           antiporter protein.
          Length = 647

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +2

Query: 368 ICLYIIQRGFLSMEEVKTLMRFFGGI 445
           +C Y+ + G   +  ++TLM F GG+
Sbjct: 381 LCKYVPEPGDAYVVPIRTLMLFGGGL 406


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +2

Query: 20  WRGKIPTG*DGCTSNFLVSIKQS*KENSILL 112
           W G + T   GC S F VS ++  +    LL
Sbjct: 557 WSGIVETALGGCLSAFFVSTQEDWRTLDALL 587


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 830,137
Number of Sequences: 2352
Number of extensions: 16918
Number of successful extensions: 21
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79834176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)