Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9c06
         (754 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   3.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   3.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.5  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   4.6  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   4.6  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 363  LTEDINEKENEFEPKSNHDFFED 431
            L +D+   +  F+PK N  +FED
Sbjct: 1245 LKKDLLHLDWPFDPKVNFTYFED 1267


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 363  LTEDINEKENEFEPKSNHDFFED 431
            L +D+   +  F+PK N  +FED
Sbjct: 1245 LKKDLLHLDWPFDPKVNFTYFED 1267


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +3

Query: 30  VCFKMHFVILICVFALTVH 86
           + F MH + L+C+   T+H
Sbjct: 187 IFFNMHLLFLLCLDYFTLH 205



 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +3

Query: 27  AVCFKMHFVILICVFALTVH 86
           ++ F +H + L+C    TVH
Sbjct: 63  SITFNVHLLFLLCSGYFTVH 82


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 638 LVAGNGDRAILLLDNV 591
           LVA NGD  I L+D +
Sbjct: 516 LVAPNGDHVISLIDEI 531


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -3

Query: 338 GFSIILLNHSCCVTKINGFN 279
           G+ IIL+   CC+  ++  N
Sbjct: 242 GYQIILVIFDCCLETVSALN 261


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,782
Number of Sequences: 336
Number of extensions: 3182
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)