Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9c06
(754 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1287 - 32390422-32391588,32392472-32392645 32 0.43
02_04_0515 + 23582105-23583519,23583613-23583741,23583835-235839... 31 0.74
02_02_0520 + 11152718-11153600,11153736-11153917,11154160-111542... 31 0.74
03_06_0195 + 32256771-32258792 30 1.7
10_08_0666 - 19691985-19692216,19692327-19692404,19692508-196928... 30 2.3
09_02_0392 + 8504856-8505041,8505099-8505143,8505836-8506404,850... 29 5.2
08_01_0764 - 7332969-7333870,7334044-7334369,7334712-7335384,733... 29 5.2
04_04_1379 + 33113374-33113529,33114046-33114143,33114811-331148... 29 5.2
02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162... 29 5.2
01_06_0871 - 32604968-32605470,32605546-32605722,32605821-32606355 29 5.2
11_04_0385 - 17022367-17022597,17022738-17022797,17022912-170229... 28 6.9
09_04_0247 + 16030543-16031324,16032812-16033088,16033374-160335... 28 6.9
04_01_0515 + 6740112-6740757,6755297-6755570,6755595-6755871 28 6.9
07_01_0523 - 3879550-3880134,3880313-3880491,3881519-3882383 28 9.2
01_06_0836 - 32321431-32321556,32321656-32321872,32321975-323235... 28 9.2
01_05_0736 - 24760576-24760690,24760885-24761108,24761188-247612... 28 9.2
>04_04_1287 - 32390422-32391588,32392472-32392645
Length = 446
Score = 32.3 bits (70), Expect = 0.43
Identities = 30/99 (30%), Positives = 45/99 (45%)
Frame = +3
Query: 108 LQTQLNMNREVNKTETIIDDNANDVLKGSNNKSDSKAESRDVLKPRSPKNIEDSLSPIEA 287
L+T + +KT +DN+ND L+GS+ K+E L SPK + + E
Sbjct: 275 LRTNREDDEPQDKTTGDANDNSNDALEGSHL---GKSE----LPQWSPKLADSQDNSTEE 327
Query: 288 IDFGNTARVVKEYNGETVVENPTDRLTEDINEKENEFEP 404
+D + R ++ GE E+ L E E NE EP
Sbjct: 328 LD---STRQLENSQGEANYESRGSNLLEKEVEASNEVEP 363
>02_04_0515 +
23582105-23583519,23583613-23583741,23583835-23583970,
23584051-23584139,23584236-23584347,23584427-23584533,
23584630-23584723
Length = 693
Score = 31.5 bits (68), Expect = 0.74
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +3
Query: 204 SDSKAESRDVLKPRSPKNIEDSLSPIEAIDFGNTARVVKEYNGETVVEN 350
+D+ E +V P+ K S+SP+++I+ G+T +V +GE +V N
Sbjct: 223 ADAGDEEENVFVPKKKK----SVSPVDSIERGSTKKVTSPESGEVLVYN 267
>02_02_0520 +
11152718-11153600,11153736-11153917,11154160-11154249,
11154343-11154627,11154776-11154994,11155112-11155339
Length = 628
Score = 31.5 bits (68), Expect = 0.74
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 6/106 (5%)
Frame = +3
Query: 102 RGLQTQLNMNREVNKTETI--IDDNAND--VLK-GSNNKSDSKAESRDVLKPRSPKNIED 266
R L++++ N E N + + I+ +D VLK +K + + +L+ + +
Sbjct: 347 RKLESEMKKNSEQNDSIHMARIEQQKSDKNVLKLVEKHKKEKEIALNKILQLEKQLDEKQ 406
Query: 267 SLSPIEAIDFGNTARVVKEYNGETV-VENPTDRLTEDINEKENEFE 401
L +E VV+ GE V V+ TD LTE++NEK E E
Sbjct: 407 KLE-LEIQQLRGRLLVVQHMEGEGVDVKKRTDELTEELNEKIEEME 451
>03_06_0195 + 32256771-32258792
Length = 673
Score = 30.3 bits (65), Expect = 1.7
Identities = 26/107 (24%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Frame = +3
Query: 300 NTARVVKEYNGETVVENPTDRLTEDINEKENEFEPKSNHDFFED---PSIFPIIDCPENC 470
+ A V ++GE +++ TD E +E++ E + + F+D S D +
Sbjct: 131 DAATEVTTFSGEEDLDDETDGDIECFDEEDGICEENPDDEIFDDEEEESDPEEEDIGSSD 190
Query: 471 TELDFNEFIFNEDIQSKYKDEYYDDANDFFLDASRFKRSVNIIEEEN 611
E D +E+I + D +S Y++E D D D+ S +E+
Sbjct: 191 LETDSDEYIESTDEESDYEEE---DTTDLESDSDEDTESTESSHDED 234
>10_08_0666 -
19691985-19692216,19692327-19692404,19692508-19692837,
19692913-19693158,19693224-19693483,19694469-19695023
Length = 566
Score = 29.9 bits (64), Expect = 2.3
Identities = 24/81 (29%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Frame = +3
Query: 213 KAESRDVLKPR-SPKNIEDSLSPIEAIDFGNTARVVKEYNGETVVENPTDRLTEDINEKE 389
+A +R +L P +P N + IEA R V + NG TV + P + D E
Sbjct: 282 RAPARRLLGPLGAPANGTHERAAIEAAAASMCWRSVADQNGFTVWQKPVGHVGCDAGENS 341
Query: 390 NEFEPKSNHDFFEDPSIFPII 452
F N F D + P I
Sbjct: 342 PRFCAGQNKKFKWDSDVEPCI 362
>09_02_0392 +
8504856-8505041,8505099-8505143,8505836-8506404,
8509267-8509585
Length = 372
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +3
Query: 336 TVVENPTDRLTEDINEKENEFEPKSNHDFFEDPSIF 443
T + + + ED +E+ENE + ++NH+ + DP+ F
Sbjct: 338 TAPHHQSQNIEEDDSEEENENDDQTNHEIY-DPNEF 372
>08_01_0764 -
7332969-7333870,7334044-7334369,7334712-7335384,
7336195-7336219
Length = 641
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +3
Query: 162 DDNANDVLKGSNNKSDSKAESRDVLKPRSPKNIEDSLSPIEAIDFGNTA 308
DDNAN + G NNK D++ + + ++ + S G+TA
Sbjct: 90 DDNANASILGQNNKDDTEKKENEEQPHHFSRSAKSDSSMCREAQAGSTA 138
>04_04_1379 +
33113374-33113529,33114046-33114143,33114811-33114880,
33116668-33116800,33116981-33118940,33119016-33119076,
33119554-33120057
Length = 993
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/76 (22%), Positives = 36/76 (47%)
Frame = +3
Query: 165 DNANDVLKGSNNKSDSKAESRDVLKPRSPKNIEDSLSPIEAIDFGNTARVVKEYNGETVV 344
++ N +K S + D + + + R+ + + +E + G A + + + TVV
Sbjct: 398 EDENKTMKESLSSKDGELQYSRTMLARTTSKLSQVEAQLEELSRGRVATDLVKCS-PTVV 456
Query: 345 ENPTDRLTEDINEKEN 392
ENP ++ED ++N
Sbjct: 457 ENPLSSISEDGCNEDN 472
>02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,
1625603-1625887,1626016-1626030,1626339-1626419,
1626909-1627322,1627423-1627719,1627801-1629864
Length = 3057
Score = 28.7 bits (61), Expect = 5.2
Identities = 37/158 (23%), Positives = 60/158 (37%), Gaps = 1/158 (0%)
Frame = +3
Query: 135 EVNKTETIIDDNAN-DVLKGSNNKSDSKAESRDVLKPRSPKNIEDSLSPIEAIDFGNTAR 311
E +T++D N D L+ SN + E ++ + PK E + AI T
Sbjct: 2856 ETADNQTVVDHNTVLDKLEDSNRQ-----EEQETAAQKLPKETEGN-QEFMAI----TEP 2905
Query: 312 VVKEYNGETVVENPTDRLTEDINEKENEFEPKSNHDFFEDPSIFPIIDCPENCTELDFNE 491
V+KE N VE T + NE++ F+ + S + E E+ E
Sbjct: 2906 VIKEENVHETVEGNTQAVKIKSNEEKELFDSQVQERGLNVVSPKATSEADEKFVEITKPE 2965
Query: 492 FIFNEDIQSKYKDEYYDDANDFFLDASRFKRSVNIIEE 605
F +E+ K + D N + + NI +E
Sbjct: 2966 FSTDEEHSPKADESNKPDENTCDEKTKAEEETNNITDE 3003
>01_06_0871 - 32604968-32605470,32605546-32605722,32605821-32606355
Length = 404
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -1
Query: 340 TVSPLYSLTTLAVLPKSMASIGLKLSSIFLG 248
T SP +L +LAV+ S+ IG SS FLG
Sbjct: 10 TCSPSAALASLAVVTTSLLIIGYASSSFFLG 40
>11_04_0385 -
17022367-17022597,17022738-17022797,17022912-17022997,
17023056-17023218,17023540-17023598,17023693-17023798,
17023927-17023993,17024109-17024222,17024664-17025077,
17025799-17025887
Length = 462
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/48 (25%), Positives = 25/48 (52%)
Frame = +3
Query: 147 TETIIDDNANDVLKGSNNKSDSKAESRDVLKPRSPKNIEDSLSPIEAI 290
T+ +++ +A+ + NK+ SRD+L KN+ +P+E +
Sbjct: 182 TQKMVEVHASSAVVAVGNKAQGILTSRDILMRMIAKNLPADSTPVEKV 229
>09_04_0247 +
16030543-16031324,16032812-16033088,16033374-16033559,
16033714-16033866,16034277-16034702,16035922-16037668,
16037687-16038183,16038519-16038709,16038786-16038941,
16040077-16040311,16040416-16040723,16041279-16041439,
16041852-16041895,16041975-16042067
Length = 1751
Score = 28.3 bits (60), Expect = 6.9
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = +3
Query: 141 NKTETIIDDNANDVLKGSNNKSDSKAESRDVLKPRSPKNIEDSLSPIEAIDFGNTARVVK 320
+K ++ AND + + N ++ + +S+ +L P I L +D V
Sbjct: 493 SKGLAFVEPQAND--RKAPNNNNFRQQSQFILYNSMPHGINGLL-----LDSAKQHSVSN 545
Query: 321 EY-NGETVVENPTDRLTEDINEKENEFEPKSN 413
E NG+ DR +D+NE+E+E P+ +
Sbjct: 546 EKENGQIKDNGDMDRARKDVNEEESEETPEDD 577
>04_01_0515 + 6740112-6740757,6755297-6755570,6755595-6755871
Length = 398
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3
Query: 294 FGNTARVVKEYNGETVVENPTDRLTEDINEK 386
F ARV Y +++ENP+D EDIN K
Sbjct: 271 FQKDARVWFFYEDSSLLENPSDFRFEDINHK 301
>07_01_0523 - 3879550-3880134,3880313-3880491,3881519-3882383
Length = 542
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = -3
Query: 482 IQFSAVFWTVYDREDRGIFEEIVVGF 405
+Q A F V +REDRGI+ IVV F
Sbjct: 244 LQHVATF-AVAEREDRGIYRRIVVSF 268
>01_06_0836 - 32321431-32321556,32321656-32321872,32321975-32323590,
32323670-32323753,32323834-32324104,32324294-32324547,
32324709-32324918,32325839-32326024
Length = 987
Score = 27.9 bits (59), Expect = 9.2
Identities = 16/63 (25%), Positives = 28/63 (44%)
Frame = +3
Query: 243 RSPKNIEDSLSPIEAIDFGNTARVVKEYNGETVVENPTDRLTEDINEKENEFEPKSNHDF 422
+ P+N+ P ++D +V N ++V E P+ T E N P+ N+D
Sbjct: 906 KGPENLTKPGEPASSVDVPYVNGIVD--NSDSVQEEPSVEATVSATETSNVDGPEDNNDS 963
Query: 423 FED 431
E+
Sbjct: 964 DEE 966
>01_05_0736 -
24760576-24760690,24760885-24761108,24761188-24761248,
24761909-24763992
Length = 827
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 23 GCGVFQNAFCDSYMCFCTYCTCSCHRSRSSNTIEH 127
GCGV + SY C C +C H R++ EH
Sbjct: 135 GCGVGHGNYNPSYTCSCPHC---LHGQRTAPQEEH 166
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,739,552
Number of Sequences: 37544
Number of extensions: 327126
Number of successful extensions: 952
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 951
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2004270760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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