Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9c05
         (437 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    28   0.034
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.24 
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    23   1.7  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   2.9  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   2.9  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   5.1  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   6.8  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   6.8  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    20   9.0  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    20   9.0  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 28.3 bits (60), Expect = 0.034
 Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = -3

Query: 387 FTCQFSSSFILVLIFHSSLSFLSTS-KWFEFFLPRYASSFSFVNILIILWLLYETM 223
           FT  F   FI+V IF+ S   +S    W    L  + S+F  VN+L I    Y T+
Sbjct: 241 FTSHFI--FIVVSIFYMSAYLISNPIMWDRVMLLTFWSAFFIVNVLYICNQCYNTV 294


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.4 bits (53), Expect = 0.24
 Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = +2

Query: 80  VSYFCQSF*YETICCFFEFSTIPI--LFVQAALEPFPKKTAGSHP 208
           + YFC++F       +  FS  P+   F    + PFP+++ G  P
Sbjct: 298 IYYFCRAFIIFPTHFYCAFSLYPLKSTFYLNVVRPFPERSMGITP 342



 Score = 20.6 bits (41), Expect = 6.8
 Identities = 9/34 (26%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -2

Query: 415 FYLSFFIKPFY-MSIFFIFHFGINLSFFLVVFVY 317
           FY +F I   + + +  I++F + L F L ++ +
Sbjct: 116 FYYAFIIFTVHLLFLLCIYYFVVPLFFLLCIYYF 149


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 193 RWQPPFVQCTHRFIKQPQNYEN 258
           R+ PP +  T   +  PQNY N
Sbjct: 23  RYLPPSLSDTRPMLPYPQNYIN 44


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -1

Query: 143 LLKIQKNNKLFHIRNFDKNM 84
           LL +  NN+LFH+ + + N+
Sbjct: 356 LLDLTDNNELFHLGSDEVNL 375


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = +2

Query: 290 GRKNSNHLEVDKNDKEE*KINTKMKDEEN 376
           G+K  N  + D++D+E+   + K+KD  +
Sbjct: 74  GKKPENVKKEDESDEEKPTTSFKLKDSSS 102


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 208 RVAASGFFREWFQCSLYK*DRYC*K 134
           RVA+  F   W+   + K D +C K
Sbjct: 295 RVASEDFKAIWYSILIKKADSFCKK 319


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = -2

Query: 385 YMSIFFIFHFGINLSFFLVVFVY 317
           Y  +  +  FG++  FF+  F Y
Sbjct: 226 YFEVQVLTIFGVSFYFFISTFFY 248


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = -2

Query: 385 YMSIFFIFHFGINLSFFLVVFVY 317
           Y  +  +  FG++  FF+  F Y
Sbjct: 222 YFEVQVLTIFGVSFYFFISTFFY 244


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 10/41 (24%), Positives = 20/41 (48%)
 Frame = -3

Query: 378 QFSSSFILVLIFHSSLSFLSTSKWFEFFLPRYASSFSFVNI 256
           QFS+ ++ + IFH  +  + + +     L +    F+  NI
Sbjct: 61  QFSTPYVGIYIFHQPVLLIRSPEILRKVLVKDFDKFTNRNI 101


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -2

Query: 379 SIFFIFHFGINLSFFLVVF 323
           +I F+F FG  L  FL VF
Sbjct: 388 TINFMFSFGFILLRFLSVF 406


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,125
Number of Sequences: 336
Number of extensions: 2096
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9775509
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)