Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9c05
         (437 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK128197-1|BAC87320.1|  161|Homo sapiens protein ( Homo sapiens ...    31   1.7  
U95740-1|AAC31662.1| 1199|Homo sapiens Unknown gene product prot...    29   5.3  

>AK128197-1|BAC87320.1|  161|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46325 fis, clone TESTI4043371. ).
          Length = 161

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 6/47 (12%)
 Frame = -2

Query: 436 FFXXYRVFYLSFFIKP------FYMSIFFIFHFGINLSFFLVVFVYL 314
           FF  +  F+LSFF  P      F +S+F  F   ++LSFFL   V L
Sbjct: 83  FFFPFLSFFLSFFFFPSFFLFSFLLSLFPSFFLSLSLSFFLFFRVSL 129


>U95740-1|AAC31662.1| 1199|Homo sapiens Unknown gene product protein.
          Length = 1199

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = -2

Query: 436  FFXXYRVFYLSFFIKPFYMSIFFIFHFGINLSFFLVVFVY 317
            FF  + V ++ FFI  F   + F+F F +   FF+VVFV+
Sbjct: 888  FFFVFFVIFI-FFIFVFVQFVVFVF-FIVVFVFFIVVFVF 925


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,052,299
Number of Sequences: 237096
Number of extensions: 993403
Number of successful extensions: 2181
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2179
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3545165828
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)