Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9c05
         (437 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL031627-13|CAA20964.1|  304|Caenorhabditis elegans Hypothetical...    30   0.64 
Z81124-11|CAB03370.2|  306|Caenorhabditis elegans Hypothetical p...    30   0.85 
Z82276-4|CAB05241.3|  327|Caenorhabditis elegans Hypothetical pr...    29   1.1  
Z81449-9|CAB03760.3|  700|Caenorhabditis elegans Hypothetical pr...    29   1.5  
Z81449-8|CAI70399.1|  705|Caenorhabditis elegans Hypothetical pr...    29   1.5  
X64415-2|CAA45761.1|  700|Caenorhabditis elegans unc-93 protein.       29   1.5  
X64415-1|CAA45760.1|  705|Caenorhabditis elegans unc-93 protein.       29   1.5  
Z67990-6|CAA91937.1|  199|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z72505-4|CAA96611.1|  347|Caenorhabditis elegans Hypothetical pr...    28   2.6  
AC006614-1|AAF39762.2|  472|Caenorhabditis elegans Hypothetical ...    28   2.6  
Z81054-8|CAB02886.3|  341|Caenorhabditis elegans Hypothetical pr...    28   3.4  
U41996-1|AAA83471.2|  306|Caenorhabditis elegans Serpentine rece...    27   4.5  
AF016670-5|AAB66104.1| 1193|Caenorhabditis elegans Hypothetical ...    27   4.5  
AC006708-7|ABM01863.1|  168|Caenorhabditis elegans Hypothetical ...    27   6.0  
U64836-1|AAX22289.1|  321|Caenorhabditis elegans Serpentine rece...    27   7.9  

>AL031627-13|CAA20964.1|  304|Caenorhabditis elegans Hypothetical
           protein Y102A5C.23 protein.
          Length = 304

 Score = 30.3 bits (65), Expect = 0.64
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -3

Query: 387 FTCQFSSSFILVLIFHSSLSFLSTSKWFEFFLPRYASSFSF 265
           F   FSS  I+  +FH  L  L+  ++F +F+P     F F
Sbjct: 89  FYSLFSSLCIITQVFHVLLFVLAVERFFIYFIPSSGKLFKF 129


>Z81124-11|CAB03370.2|  306|Caenorhabditis elegans Hypothetical
           protein T21B4.1 protein.
          Length = 306

 Score = 29.9 bits (64), Expect = 0.85
 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
 Frame = -3

Query: 348 IFHSSLSFLSTSKWFEFFLPRYASSFSFVNIL--IILWLLYETMSTLNEGWLPA 193
           IF+  L+ L+  ++  FFLP +   FSF +    + + LLY T   +N G + A
Sbjct: 95  IFNFLLAILALQRFLIFFLPDFEKFFSFKSKTWKVFIILLYFTFFIVNAGMVYA 148


>Z82276-4|CAB05241.3|  327|Caenorhabditis elegans Hypothetical
           protein K03D3.4 protein.
          Length = 327

 Score = 29.5 bits (63), Expect = 1.1
 Identities = 14/57 (24%), Positives = 30/57 (52%)
 Frame = -3

Query: 360 ILVLIFHSSLSFLSTSKWFEFFLPRYASSFSFVNILIILWLLYETMSTLNEGWLPAV 190
           I+  +FH  +S L+  K+F +F PR+  +   +   I  ++++  ++  +   L AV
Sbjct: 113 IIADVFHLLISLLAMEKFFIYFFPRWEKTVISIQKYIHKYIVFVYLACCSRYMLSAV 169


>Z81449-9|CAB03760.3|  700|Caenorhabditis elegans Hypothetical
           protein C46F11.1b protein.
          Length = 700

 Score = 29.1 bits (62), Expect = 1.5
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -2

Query: 412 YLSFFIKPFYMSIFFIFHFGINLSFFLVVFVY 317
           YLS  I   ++  F I   G  L+F + +FVY
Sbjct: 282 YLSLAISSLFVPSFMINRLGCKLTFLIAIFVY 313


>Z81449-8|CAI70399.1|  705|Caenorhabditis elegans Hypothetical
           protein C46F11.1a protein.
          Length = 705

 Score = 29.1 bits (62), Expect = 1.5
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -2

Query: 412 YLSFFIKPFYMSIFFIFHFGINLSFFLVVFVY 317
           YLS  I   ++  F I   G  L+F + +FVY
Sbjct: 287 YLSLAISSLFVPSFMINRLGCKLTFLIAIFVY 318


>X64415-2|CAA45761.1|  700|Caenorhabditis elegans unc-93 protein.
          Length = 700

 Score = 29.1 bits (62), Expect = 1.5
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -2

Query: 412 YLSFFIKPFYMSIFFIFHFGINLSFFLVVFVY 317
           YLS  I   ++  F I   G  L+F + +FVY
Sbjct: 282 YLSLAISSLFVPSFMINRLGCKLTFLIAIFVY 313


>X64415-1|CAA45760.1|  705|Caenorhabditis elegans unc-93 protein.
          Length = 705

 Score = 29.1 bits (62), Expect = 1.5
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -2

Query: 412 YLSFFIKPFYMSIFFIFHFGINLSFFLVVFVY 317
           YLS  I   ++  F I   G  L+F + +FVY
Sbjct: 287 YLSLAISSLFVPSFMINRLGCKLTFLIAIFVY 318


>Z67990-6|CAA91937.1|  199|Caenorhabditis elegans Hypothetical
           protein F02D10.6 protein.
          Length = 199

 Score = 28.7 bits (61), Expect = 2.0
 Identities = 9/26 (34%), Positives = 18/26 (69%)
 Frame = -2

Query: 433 FXXYRVFYLSFFIKPFYMSIFFIFHF 356
           +  Y ++ L + I PF++S++F+F F
Sbjct: 83  YNVYILYTLGYMIVPFHISLYFLFEF 108


>Z72505-4|CAA96611.1|  347|Caenorhabditis elegans Hypothetical
           protein C50C10.6 protein.
          Length = 347

 Score = 28.3 bits (60), Expect = 2.6
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = -3

Query: 387 FTCQFSSSFILVLIFHSSLSFLSTSKWFEFFLPRYASSFSFVNI 256
           F   F++ F++ LI   S   L   KW   +   +  ++SFVN+
Sbjct: 19  FISIFTNLFLIYLILKRSPDALGLYKWLMMYTSIFELTYSFVNL 62


>AC006614-1|AAF39762.2|  472|Caenorhabditis elegans Hypothetical
           protein C34H3.1 protein.
          Length = 472

 Score = 28.3 bits (60), Expect = 2.6
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = -3

Query: 390 PFTCQF-SSSFILVLIFHSSLSFLSTSKWF 304
           P TC+F    F LVL+  S ++FL  + WF
Sbjct: 272 PHTCRFFMHPFFLVLVLASFVAFLVIATWF 301


>Z81054-8|CAB02886.3|  341|Caenorhabditis elegans Hypothetical
           protein F01D4.7 protein.
          Length = 341

 Score = 27.9 bits (59), Expect = 3.4
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = -3

Query: 387 FTCQFSSSFILVLIFHSSLSFLSTSKWFEFFLPRYASSFSF-VNILIILWLLY 232
           F   F  +F+LV ++H  LS +S      FFL  Y++  +F  NI I+ +  +
Sbjct: 17  FPGAFHPAFLLVKLYHILLSVISMGSIIYFFL-NYSNLLAFHFNIKILFFFQF 68


>U41996-1|AAA83471.2|  306|Caenorhabditis elegans Serpentine
           receptor, class sx protein22 protein.
          Length = 306

 Score = 27.5 bits (58), Expect = 4.5
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -2

Query: 424 YRVFYLSFFIKPFYMSIFFIFHFGINLSFFLVVF 323
           + +FY  +FI+   M I  I++   NL FFL ++
Sbjct: 52  FNLFYCIYFIQLRVMMIMEIYNITNNLCFFLSIY 85


>AF016670-5|AAB66104.1| 1193|Caenorhabditis elegans Hypothetical
            protein K02F6.4 protein.
          Length = 1193

 Score = 27.5 bits (58), Expect = 4.5
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = +3

Query: 54   KSKYEKMKKFHIFVKVSNMKQFVVFLNFQQYLSYLYRLHWNHSRKK 191
            KSK E +K+ + FVK +N      +  F Q+L      HW  + KK
Sbjct: 1134 KSKDELVKE-YAFVKNNNCYTIFTYYEFLQFLLAFKITHWKLTGKK 1178


>AC006708-7|ABM01863.1|  168|Caenorhabditis elegans Hypothetical
           protein Y110A7A.21 protein.
          Length = 168

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
 Frame = -3

Query: 384 TCQF----SSSFILVLIFHSSLSFLSTSKWFEFFLPRYASSFSFVNILIILWLLYETMST 217
           TC F    SS F+L  +F+  ++     +W  F+   + SSFSF+  +  L +LY ++  
Sbjct: 57  TCVFAIIGSSVFLLCDVFN--INETEPDEWV-FWESVFISSFSFLFTINTLTMLYSSIRW 113

Query: 216 LNEGW 202
            N  W
Sbjct: 114 NNTAW 118


>U64836-1|AAX22289.1|  321|Caenorhabditis elegans Serpentine
           receptor, class x protein92, isoform b protein.
          Length = 321

 Score = 26.6 bits (56), Expect = 7.9
 Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = -3

Query: 324 LSTSKWFEFFLP-RYASSFSFVNILIILWLLY 232
           ++ +++   FLP +YA+ FS  NI IIL  +Y
Sbjct: 107 IAINRFCAVFLPTKYATIFSLFNITIILVFIY 138


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,981,026
Number of Sequences: 27780
Number of extensions: 183431
Number of successful extensions: 614
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 614
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 745968860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)