Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9c05
         (437 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    23   1.5  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    23   1.5  
DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex det...    23   1.9  
DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex det...    23   1.9  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   1.9  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    22   3.4  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   5.9  
DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channe...    21   7.9  
DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              21   7.9  

>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 240 LLYETMSTLNEGWLPAVFFGN 178
           L Y T++  +  W+P +FF N
Sbjct: 104 LKYLTLTDASRVWMPDLFFSN 124


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 240 LLYETMSTLNEGWLPAVFFGN 178
           L Y T++  +  W+P +FF N
Sbjct: 104 LKYLTLTDASRVWMPDLFFSN 124


>DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 11/45 (24%), Positives = 21/45 (46%)
 Frame = +1

Query: 244 QNYENINKRKTTSISR*KEFKPFGGRQKRQGRMKD*YQNER*RKL 378
           + Y    +R+  S    KE++ +  R K + R K   +  + RK+
Sbjct: 37  KRYSRSREREQNSYKNEKEYRKYRERSKERSRDKRERERSKERKI 81


>DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 11/45 (24%), Positives = 21/45 (46%)
 Frame = +1

Query: 244 QNYENINKRKTTSISR*KEFKPFGGRQKRQGRMKD*YQNER*RKL 378
           + Y    +R+  S    KE++ +  R K + R K   +  + RK+
Sbjct: 37  KRYSRSREREQNSYKNEKEYRKYRERSKERSRDKRERERSKERKI 81


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = +2

Query: 107 YETICCFFEFSTIPILFVQAALEPFPKKTAGSH 205
           +E +C   ++ST     +++A+  FP++T G H
Sbjct: 150 FEALCNHIKYSTNKGN-IRSAITIFPQRTDGKH 181


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -2

Query: 346 LSFFLVVFVYL 314
           LSFF+V+F Y+
Sbjct: 411 LSFFIVIFTYI 421


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +1

Query: 184 EKNRWQPPFVQCTHRFIKQPQNYENI 261
           + N  +P F+       K PQ  ENI
Sbjct: 262 DNNIVRPDFINMLMELQKNPQKLENI 287


>DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channel
           protein.
          Length = 489

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -3

Query: 204 WLPAVFFGNGSNA 166
           W+P  FF N  N+
Sbjct: 117 WVPDTFFANDKNS 129


>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = +2

Query: 257 ILTKEKLLAYLGRKNSNHLEVDKNDKEE*KINTKMKDEEN*HVK 388
           IL K  +    G K    L +D+N  ++   +     EEN H+K
Sbjct: 72  ILDKNNVFKPQGIKAVMELLIDENSVKQLVSDCSTISEENPHLK 115


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,233
Number of Sequences: 438
Number of extensions: 1968
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11327868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)