Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9c03
         (614 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IKZ8 Cluster: Putative uncharacterized protein; n=7; ...    34   3.1  
UniRef50_A3DN78 Cluster: Ribose 5-phosphate isomerase; n=1; Stap...    34   3.1  
UniRef50_Q3UQ20 Cluster: 0 day neonate lung cDNA, RIKEN full-len...    33   5.4  
UniRef50_Q17JW9 Cluster: Putative uncharacterized protein; n=1; ...    33   5.4  
UniRef50_P45004 Cluster: Anaerobic dimethyl sulfoxide reductase ...    33   5.4  
UniRef50_A4VEH7 Cluster: Putative uncharacterized protein; n=1; ...    32   9.4  
UniRef50_P11311 Cluster: Adhesin P1 precursor; n=22; Mycoplasma ...    32   9.4  

>UniRef50_Q8IKZ8 Cluster: Putative uncharacterized protein; n=7;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium falciparum (isolate 3D7)
          Length = 342

 Score = 33.9 bits (74), Expect = 3.1
 Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
 Frame = -1

Query: 488 FYYRFPQ-IFLS*TVSFFAFLWLDEQF*KLKHIVLQCQRLLLYF-LDTYAFSMLLFHLTT 315
           F+Y+  Q I+    + +  FL+LDEQ+   K + ++C +  + F  DTY   + L + T+
Sbjct: 73  FFYQIIQTIYCRLLLFYLGFLYLDEQYANNKRVKIKCTKQKIPFTYDTYG-HIFLSNFTS 131

Query: 314 CVDI 303
            VDI
Sbjct: 132 FVDI 135


>UniRef50_A3DN78 Cluster: Ribose 5-phosphate isomerase; n=1;
           Staphylothermus marinus F1|Rep: Ribose 5-phosphate
           isomerase - Staphylothermus marinus (strain ATCC 43588 /
           DSM 3639 / F1)
          Length = 233

 Score = 33.9 bits (74), Expect = 3.1
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = +2

Query: 137 AGLILIMGRMTGIKWEKSIQCRPIHNIISSDFPKYNPQPWKFME 268
           A L +I GR   + WEK +  R    I  +D+ K NP+ + +M+
Sbjct: 92  ANLDIIKGRGAALLWEKQLAIRSKLRIYIADYTKVNPEQYLYMK 135


>UniRef50_Q3UQ20 Cluster: 0 day neonate lung cDNA, RIKEN full-length
           enriched library, clone:E030003M06 product:hypothetical
           protein, full insert sequence; n=2; Mus musculus|Rep: 0
           day neonate lung cDNA, RIKEN full-length enriched
           library, clone:E030003M06 product:hypothetical protein,
           full insert sequence - Mus musculus (Mouse)
          Length = 208

 Score = 33.1 bits (72), Expect = 5.4
 Identities = 23/105 (21%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
 Frame = -1

Query: 572 CNINETFSYYLCFSYKPWPYHRQTVYFSFYYRFPQIFLS*TVSFFAFLWLDEQF*KLKHI 393
           C I+  +S++L   Y    Y    V+    Y F  +F     +FF ++ L  QF  + +I
Sbjct: 17  CYIHSLYSFFLYIHYIHSLYTYFHVFSPLLYTFFHVFSPLLYTFFIYILLRFQFIAI-YI 75

Query: 392 VLQCQRLLLY--FLDTYAFSMLLFHLTTCVDIHMIATI-RYVIYL 267
           + + Q +  Y  ++ ++ FS+  +  +     H+ + +  Y++Y+
Sbjct: 76  LSRFQSIATYILYIHSFTFSVRCYIHSLYTFFHVFSPVATYILYI 120


>UniRef50_Q17JW9 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 137

 Score = 33.1 bits (72), Expect = 5.4
 Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = +2

Query: 176 KWEKSIQCRPIHNIIS-SDFPKYNP-QPWKFMEGKSRIEWLLSYEYQRMW 319
           KW K+   RPI NIIS  D  +  P +P     G   +  LL Y+Y R+W
Sbjct: 12  KWTKAYLLRPIDNIISHPDALRKRPFRPSFESHGAPSLPCLLRYDYFRIW 61


>UniRef50_P45004 Cluster: Anaerobic dimethyl sulfoxide reductase
           chain A precursor; n=26; Gammaproteobacteria|Rep:
           Anaerobic dimethyl sulfoxide reductase chain A precursor
           - Haemophilus influenzae
          Length = 806

 Score = 33.1 bits (72), Expect = 5.4
 Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
 Frame = +2

Query: 188 SIQCRPIHNIISSDFPKYNPQPWKFMEGKSRIEWLLS-YEYQRMWLDE 328
           S +CRPI++++S    K   +  KF EG+++ EWL   YE  R  L E
Sbjct: 552 SFECRPIYDMLSDLAEKMGVKE-KFTEGRTQEEWLRHIYEQSREKLPE 598


>UniRef50_A4VEH7 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 270

 Score = 32.3 bits (70), Expect = 9.4
 Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
 Frame = -2

Query: 556 RFLIIFVFHISHGLIIGRPFTFRFTIDSLKFFYLEQFLFLR--FYGLMSSFES*NISFYN 383
           RF I F+F +   L++  P  F F    L   +L  FL L    YGL   F   ++S  N
Sbjct: 121 RFSIFFLFILI--LLLAFPLIFSFFFKVLLILFLFSFLILLLIIYGLAGIFYLLSLSLLN 178

Query: 382 VNVYCCIFWIHTL--FPCFSF 326
           + ++  IF+I  L  F  F F
Sbjct: 179 LFLFNRIFFIGNLSVFDFFCF 199


>UniRef50_P11311 Cluster: Adhesin P1 precursor; n=22; Mycoplasma
           pneumoniae|Rep: Adhesin P1 precursor - Mycoplasma
           pneumoniae
          Length = 1627

 Score = 32.3 bits (70), Expect = 9.4
 Identities = 16/53 (30%), Positives = 26/53 (49%)
 Frame = +2

Query: 194 QCRPIHNIISSDFPKYNPQPWKFMEGKSRIEWLLSYEYQRMWLDEREAWKKRM 352
           Q RPI N++ + F K    PW+   GK   +++  Y Y  MW  +   W  ++
Sbjct: 666 QDRPIQNVVDA-FIK----PWEDKNGKDDAKYIYPYRYSGMWAWQVYNWSNKL 713


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 514,742,090
Number of Sequences: 1657284
Number of extensions: 10035131
Number of successful extensions: 25160
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 24116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25036
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44392209541
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)