Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9c03
         (614 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    24   1.2  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    24   1.2  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    23   2.0  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   3.6  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   6.2  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   6.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.2  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   8.2  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       21   8.2  

>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +2

Query: 182 EKSIQCRPIHNIISSDFPKYNPQP 253
           E  +   P  N+++   PKY P P
Sbjct: 132 ESRVMMSPPGNVLNLTMPKYEPNP 155


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +2

Query: 182 EKSIQCRPIHNIISSDFPKYNPQP 253
           E  +   P  N+++   PKY P P
Sbjct: 132 ESRVMMSPPGNVLNLTMPKYEPNP 155


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = -2

Query: 445 LFLRFYGLMSSFES*NISFYNVNVYCCIFWIHTL 344
           LFL  YG+  S     +SF    V  C  WI TL
Sbjct: 261 LFL-VYGMSKSRNIEGVSFGTNLVILCALWITTL 293


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 9/37 (24%), Positives = 18/37 (48%)
 Frame = +2

Query: 236 KYNPQPWKFMEGKSRIEWLLSYEYQRMWLDEREAWKK 346
           KYNP    F++ K R + +   EY   +  ++  + +
Sbjct: 195 KYNPFAKAFLDAKERPDSIYQREYSPTFTQQQTQYSQ 231


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -2

Query: 547 IIFVFHISHGLIIGRPFTFRFTIDSLKFFYLEQFL 443
           +I   + ++GLI+   FT  F    +  FY+  +L
Sbjct: 225 LIKQLNATYGLILLLMFTSHFIFIVVSIFYMSAYL 259


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 7/30 (23%), Positives = 19/30 (63%)
 Frame = -1

Query: 404 LKHIVLQCQRLLLYFLDTYAFSMLLFHLTT 315
           L+H +++ +  ++YF   + +++L  H+ T
Sbjct: 137 LEHNLIRLKNCVIYFNRIFGWNILFGHIFT 166


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = -1

Query: 581 FHCCNINETFSYYLCFSYKPWPYHRQTVYFSFYYRF 474
           F+C  I  T  + LC  Y  + +      + FYY F
Sbjct: 85  FYCPFIIFTVHFLLCTYYFYYAFIILLCVYYFYYAF 120



 Score = 21.4 bits (43), Expect = 6.2
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = -1

Query: 590 LFSFHCCNINETFSYYLCFSYKPWPYHRQTVYFSFY 483
           ++ F+C  I     YY C ++  +P H     FS Y
Sbjct: 285 IYYFYCALIILLCIYYFCRAFIIFPTHFYCA-FSLY 319


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 5/11 (45%), Positives = 10/11 (90%)
 Frame = -1

Query: 515 YHRQTVYFSFY 483
           +H++ +Y+SFY
Sbjct: 174 FHKKNLYYSFY 184


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -2

Query: 256 PRLRIVFRKIRRNYVVNWSA 197
           PRL  V+ K  +NY V+ SA
Sbjct: 141 PRLPTVYGKPEQNYEVDESA 160


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,415
Number of Sequences: 336
Number of extensions: 2814
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)