Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9c02
         (444 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00006CAA44 Cluster: hypothetical protein TTHERM_0032...    35   0.91 
UniRef50_UPI0000DBFC45 Cluster: UPI0000DBFC45 related cluster; n...    33   2.8  
UniRef50_A6DJH7 Cluster: ABC transporter, periplasmic binding pr...    33   3.7  

>UniRef50_UPI00006CAA44 Cluster: hypothetical protein
           TTHERM_00329870; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00329870 - Tetrahymena
           thermophila SB210
          Length = 1654

 Score = 34.7 bits (76), Expect = 0.91
 Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
 Frame = -1

Query: 243 YYTCIFVSS*ES--LSRHTCTYELN-MKKEINFGDRLNSRKIQEIVFHCQIVF 94
           YYT  F  S  S  L  H C YE+N  +K IN  D+ +S K  + +F C I F
Sbjct: 260 YYTIYFKDSYPSTELCNHNCDYEINQQQKFINLYDKRSSNKEIKYIF-CNITF 311


>UniRef50_UPI0000DBFC45 Cluster: UPI0000DBFC45 related cluster; n=1;
           Rattus norvegicus|Rep: UPI0000DBFC45 UniRef100 entry -
           Rattus norvegicus
          Length = 272

 Score = 33.1 bits (72), Expect = 2.8
 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = -3

Query: 301 YLMIVYGTSQNVCCKAECYLLYMY--FCVFLRVVIEAYMYI 185
           YL  VY  +  V C   C  +YMY   C+++ +++  YMY+
Sbjct: 22  YLFCVYICTSIVVCTRVCLCMYMYVVMCLYICLLMHVYMYM 62


>UniRef50_A6DJH7 Cluster: ABC transporter, periplasmic binding
           protein, putative; n=1; Lentisphaera araneosa
           HTCC2155|Rep: ABC transporter, periplasmic binding
           protein, putative - Lentisphaera araneosa HTCC2155
          Length = 1031

 Score = 32.7 bits (71), Expect = 3.7
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = +1

Query: 238 IINNIRLYNRHFEKCHKLSSNIFTKIQFQHYSLAK 342
           ++NNI+ Y  + +KC    +N  TK+Q+Q  S+ K
Sbjct: 590 VVNNIKKYQNYIKKCTFSLNNTHTKLQYQTSSVFK 624


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 406,673,286
Number of Sequences: 1657284
Number of extensions: 7799349
Number of successful extensions: 16652
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16635
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 22761518346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)