Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9b24
(597 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 153 7e-38
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 69 2e-12
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 69 2e-12
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 69 3e-12
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 69 3e-12
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 69 3e-12
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 69 3e-12
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 69 3e-12
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 66 2e-11
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 64 5e-11
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 64 5e-11
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 61 5e-10
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 61 5e-10
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 61 5e-10
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 61 5e-10
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 61 5e-10
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 61 7e-10
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 61 7e-10
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 60 9e-10
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 59 2e-09
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 57 1e-08
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 57 1e-08
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 57 1e-08
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 57 1e-08
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 57 1e-08
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 57 1e-08
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 57 1e-08
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 56 1e-08
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 56 2e-08
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 55 3e-08
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 55 4e-08
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 54 8e-08
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 54 1e-07
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 50 1e-06
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 50 1e-06
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 50 1e-06
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 50 1e-06
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 48 4e-06
Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical pr... 48 4e-06
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 48 4e-06
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 48 4e-06
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 48 4e-06
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 48 7e-06
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 47 1e-05
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 45 5e-05
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 45 5e-05
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 44 8e-05
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 44 8e-05
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 43 2e-04
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 43 2e-04
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 43 2e-04
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 43 2e-04
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 42 3e-04
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 41 6e-04
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 41 8e-04
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 41 8e-04
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 41 8e-04
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 40 0.001
AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical ... 40 0.001
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 40 0.002
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 40 0.002
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 40 0.002
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 40 0.002
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 40 0.002
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 37 0.009
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 37 0.009
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 37 0.009
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 37 0.013
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 37 0.013
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 37 0.013
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 36 0.022
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 35 0.038
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 35 0.051
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 34 0.067
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 34 0.067
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 34 0.067
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 34 0.067
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 34 0.067
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 34 0.067
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 34 0.067
Z81522-4|CAB04233.1| 771|Caenorhabditis elegans Hypothetical pr... 34 0.088
U55857-6|AAA98032.2| 206|Caenorhabditis elegans Rnp (rrm rna bi... 34 0.088
U23486-7|AAC46775.1| 428|Caenorhabditis elegans Hypothetical pr... 34 0.088
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 33 0.15
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 32 0.36
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 32 0.36
U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical pr... 31 0.47
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 31 0.47
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 31 0.47
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 31 0.62
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 31 0.82
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 31 0.82
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 31 0.82
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 31 0.82
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 31 0.82
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 31 0.82
Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z68004-3|CAA91983.2| 380|Caenorhabditis elegans Hypothetical pr... 30 1.4
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 30 1.4
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 30 1.4
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 30 1.4
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 29 1.9
U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (sp... 29 1.9
U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (sp... 29 1.9
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 29 1.9
AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical ... 29 2.5
U23484-17|AAK68296.1| 367|Caenorhabditis elegans Tudor domain p... 29 3.3
AF303251-1|AAG50209.1| 367|Caenorhabditis elegans 2F713 protein. 29 3.3
AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical... 29 3.3
Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z70687-1|CAA94616.3| 403|Caenorhabditis elegans Hypothetical pr... 28 4.4
U28732-4|AAB04900.1| 257|Caenorhabditis elegans Hypothetical pr... 28 4.4
AF016684-16|AAB66213.1| 506|Caenorhabditis elegans Hypothetical... 28 4.4
Z77660-3|CAB01171.1| 471|Caenorhabditis elegans Hypothetical pr... 28 5.8
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 27 7.7
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 27 7.7
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 27 7.7
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 27 7.7
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 153 bits (372), Expect = 7e-38
Identities = 66/127 (51%), Positives = 100/127 (78%)
Frame = +2
Query: 212 ARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARA 391
++TNLI+NYLPQ +T++++ ++F +IG IESC++++D TG S G+GFVN+ REEDA RA
Sbjct: 40 SKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRA 99
Query: 392 IDTFNGYQLRNKRLKVSYARPSGDDIKETNLYVTNLPRAITDDQLETIFGKYGRIVQKHI 571
+ +FNG +L+NK +KVSYARPS D IK +NLYV+ +P+++T +LE+IF +G+I+ I
Sbjct: 100 VSSFNGLRLQNKTIKVSYARPSNDQIKGSNLYVSGIPKSMTLHELESIFRPFGQIITSRI 159
Query: 572 LRDKNSG 592
L D +G
Sbjct: 160 LSDNVTG 166
Score = 51.6 bits (118), Expect = 4e-07
Identities = 25/64 (39%), Positives = 41/64 (64%)
Frame = +2
Query: 218 TNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAID 397
+NL V+ +P+++T +L ++F G I + R++ D TG S G GFV F ++++A AI
Sbjct: 128 SNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEADVAIK 187
Query: 398 TFNG 409
T NG
Sbjct: 188 TLNG 191
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 69.3 bits (162), Expect = 2e-12
Identities = 39/143 (27%), Positives = 70/143 (48%), Gaps = 2/143 (1%)
Frame = +2
Query: 164 GSMSEGGGLSAAGGDTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSY 343
G+ + G + G +L V L ++ E L+ F GP+ S RV +D T S
Sbjct: 14 GAAAPQPGQNQTGSSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSL 73
Query: 344 GFGFVNFTREEDAARAIDTFNGYQLRNKRLKVSYAR--PSGDDIKETNLYVTNLPRAITD 517
G+ +VNF + DA RA+DT N L K +++ +++ P+ N+++ NL + I +
Sbjct: 74 GYAYVNFQQPADAERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDN 133
Query: 518 DQLETIFGKYGRIVQKHILRDKN 586
+ F +G I+ + D++
Sbjct: 134 KSIYDTFSLFGNILSCKVAIDED 156
Score = 68.9 bits (161), Expect = 3e-12
Identities = 43/126 (34%), Positives = 63/126 (50%), Gaps = 8/126 (6%)
Frame = +2
Query: 221 NLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIDT 400
N+ + L + I K +Y F G I SC+V D + G+S G+GFV+F EE A AI
Sbjct: 121 NIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAID-EDGFSKGYGFVHFETEEAAQNAIQK 179
Query: 401 FNGYQLRNKRLKVSYARPS-------GDDIKE-TNLYVTNLPRAITDDQLETIFGKYGRI 556
NG L K++ V +P G+ K+ TN+YV N + LE +F K+G I
Sbjct: 180 VNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKVFAKFGNI 239
Query: 557 VQKHIL 574
++
Sbjct: 240 TSCEVM 245
Score = 56.0 bits (129), Expect = 2e-08
Identities = 46/150 (30%), Positives = 67/150 (44%), Gaps = 22/150 (14%)
Frame = +2
Query: 203 GDTAR--TNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREE 376
G+TA+ TN+ V + ++ L +F G I SC VM G S GFGFV F E
Sbjct: 206 GETAKQFTNVYVKNFGDHYNKETLEKVFAKFGNITSCEVMT--VEGKSKGFGFVAFANPE 263
Query: 377 DAARAID-----TFNGYQL------------RNKRLKVSYARPSGDDIKE---TNLYVTN 496
+A A+ T G L R+ LK + + + +++ NLYV N
Sbjct: 264 EAETAVQALHDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKN 323
Query: 497 LPRAITDDQLETIFGKYGRIVQKHILRDKN 586
L + DD L+ F YG I ++ D+N
Sbjct: 324 LDETVDDDGLKKQFESYGNITSAKVMTDEN 353
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 69.3 bits (162), Expect = 2e-12
Identities = 39/143 (27%), Positives = 70/143 (48%), Gaps = 2/143 (1%)
Frame = +2
Query: 164 GSMSEGGGLSAAGGDTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSY 343
G+ + G + G +L V L ++ E L+ F GP+ S RV +D T S
Sbjct: 14 GAAAPQPGQNQTGSSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSL 73
Query: 344 GFGFVNFTREEDAARAIDTFNGYQLRNKRLKVSYAR--PSGDDIKETNLYVTNLPRAITD 517
G+ +VNF + DA RA+DT N L K +++ +++ P+ N+++ NL + I +
Sbjct: 74 GYAYVNFQQPADAERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDN 133
Query: 518 DQLETIFGKYGRIVQKHILRDKN 586
+ F +G I+ + D++
Sbjct: 134 KSIYDTFSLFGNILSCKVAIDED 156
Score = 68.5 bits (160), Expect = 3e-12
Identities = 43/126 (34%), Positives = 63/126 (50%), Gaps = 8/126 (6%)
Frame = +2
Query: 221 NLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIDT 400
N+ + L + I K +Y F G I SC+V D + G+S G+GFV+F EE A AI
Sbjct: 121 NIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAID-EDGFSKGYGFVHFETEEAAQNAIQK 179
Query: 401 FNGYQLRNKRLKVSYARPS-------GDDIKE-TNLYVTNLPRAITDDQLETIFGKYGRI 556
NG L K++ V +P G+ K+ TN+YV N + LE +F K+G I
Sbjct: 180 VNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLFAKFGNI 239
Query: 557 VQKHIL 574
++
Sbjct: 240 TSCEVM 245
Score = 56.4 bits (130), Expect = 1e-08
Identities = 46/150 (30%), Positives = 67/150 (44%), Gaps = 22/150 (14%)
Frame = +2
Query: 203 GDTAR--TNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREE 376
G+TA+ TN+ V + ++ L +F G I SC VM G S GFGFV F E
Sbjct: 206 GETAKQFTNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMT--VEGKSKGFGFVAFANPE 263
Query: 377 DAARAID-----TFNGYQL------------RNKRLKVSYARPSGDDIKE---TNLYVTN 496
+A A+ T G L R+ LK + + + +++ NLYV N
Sbjct: 264 EAETAVQALHDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKN 323
Query: 497 LPRAITDDQLETIFGKYGRIVQKHILRDKN 586
L + DD L+ F YG I ++ D+N
Sbjct: 324 LDETVDDDGLKKQFESYGNITSAKVMTDEN 353
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 68.9 bits (161), Expect = 3e-12
Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Frame = +2
Query: 221 NLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIDT 400
N+ + L + I K +Y F G I SC+V D + G S G+GFV+F E A AI+
Sbjct: 146 NIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDE-GNSKGYGFVHFETEHSAQTAIEK 204
Query: 401 FNGYQLRNKRLKVSYARPSGDDIKE--------TNLYVTNLPRAITDDQLETIFGKYGRI 556
NG L +K++ V +P +KE TN++V N + ++L +F K+G I
Sbjct: 205 VNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEI 264
Query: 557 VQKHILRD 580
++ D
Sbjct: 265 TSAVVMTD 272
Score = 64.1 bits (149), Expect = 7e-11
Identities = 33/122 (27%), Positives = 63/122 (51%), Gaps = 2/122 (1%)
Frame = +2
Query: 221 NLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIDT 400
+L + L +++E L+ F GP+ S RV +D + S G+ +VNF + DA RA+DT
Sbjct: 58 SLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDT 117
Query: 401 FNGYQLRNKRLKVSYAR--PSGDDIKETNLYVTNLPRAITDDQLETIFGKYGRIVQKHIL 574
N + + +++ +++ P+ N+++ NL R I + + F +G I+ +
Sbjct: 118 MNFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVA 177
Query: 575 RD 580
D
Sbjct: 178 TD 179
Score = 52.0 bits (119), Expect = 3e-07
Identities = 41/143 (28%), Positives = 62/143 (43%), Gaps = 20/143 (13%)
Frame = +2
Query: 218 TNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAID 397
TN+ V +++ ++ L AMF G I S VM D + G GFGFV F ++ A +A++
Sbjct: 238 TNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQDAAGQAVE 296
Query: 398 TFNGYQLRNKRLKVSYARPS-----GDDIKE---------------TNLYVTNLPRAITD 517
N L K+S R ++K NLYV N+ + D
Sbjct: 297 KLNDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLND 356
Query: 518 DQLETIFGKYGRIVQKHILRDKN 586
D L F +G I ++ D+N
Sbjct: 357 DGLRDHFSSFGTITSAKVMVDEN 379
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 68.9 bits (161), Expect = 3e-12
Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Frame = +2
Query: 221 NLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIDT 400
N+ + L + I K +Y F G I SC+V D + G S G+GFV+F E A AI+
Sbjct: 146 NIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDE-GNSKGYGFVHFETEHSAQTAIEK 204
Query: 401 FNGYQLRNKRLKVSYARPSGDDIKE--------TNLYVTNLPRAITDDQLETIFGKYGRI 556
NG L +K++ V +P +KE TN++V N + ++L +F K+G I
Sbjct: 205 VNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEI 264
Query: 557 VQKHILRD 580
++ D
Sbjct: 265 TSAVVMTD 272
Score = 64.1 bits (149), Expect = 7e-11
Identities = 33/122 (27%), Positives = 63/122 (51%), Gaps = 2/122 (1%)
Frame = +2
Query: 221 NLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIDT 400
+L + L +++E L+ F GP+ S RV +D + S G+ +VNF + DA RA+DT
Sbjct: 58 SLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDT 117
Query: 401 FNGYQLRNKRLKVSYAR--PSGDDIKETNLYVTNLPRAITDDQLETIFGKYGRIVQKHIL 574
N + + +++ +++ P+ N+++ NL R I + + F +G I+ +
Sbjct: 118 MNFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVA 177
Query: 575 RD 580
D
Sbjct: 178 TD 179
Score = 52.0 bits (119), Expect = 3e-07
Identities = 41/143 (28%), Positives = 62/143 (43%), Gaps = 20/143 (13%)
Frame = +2
Query: 218 TNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAID 397
TN+ V +++ ++ L AMF G I S VM D + G GFGFV F ++ A +A++
Sbjct: 238 TNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQDAAGQAVE 296
Query: 398 TFNGYQLRNKRLKVSYARPS-----GDDIKE---------------TNLYVTNLPRAITD 517
N L K+S R ++K NLYV N+ + D
Sbjct: 297 KLNDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLND 356
Query: 518 DQLETIFGKYGRIVQKHILRDKN 586
D L F +G I ++ D+N
Sbjct: 357 DGLRDHFSSFGTITSAKVMVDEN 379
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 68.9 bits (161), Expect = 3e-12
Identities = 44/126 (34%), Positives = 65/126 (51%), Gaps = 2/126 (1%)
Frame = +2
Query: 224 LIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIDTF 403
+ V L + ++E L+ + V GP+ S + KD T GFGFV F EEDA AI
Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 74
Query: 404 NGYQLRNKRLKVSYARPSGDDIK-ETNLYVTNLPRAITDDQLETIFGKYGRIVQ-KHILR 577
N +L K +KV+ A ++ N++V NL + + L F +G I+Q I+R
Sbjct: 75 NMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMR 134
Query: 578 DKNSGT 595
D +SGT
Sbjct: 135 DVDSGT 140
Score = 53.6 bits (123), Expect = 1e-07
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +2
Query: 221 NLIVNYLPQNITEKDLYAMFVTIGPI-ESCRVMKDFKTGYSYGFGFVNFTREEDAARAID 397
N+ V L + EK LY F G I + ++M+D +G S GF F+NF E + A++
Sbjct: 101 NIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALE 160
Query: 398 TFNGYQLRNKRLKVSYA 448
NG L N+ + VSYA
Sbjct: 161 AMNGQFLCNRAITVSYA 177
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 68.9 bits (161), Expect = 3e-12
Identities = 44/126 (34%), Positives = 65/126 (51%), Gaps = 2/126 (1%)
Frame = +2
Query: 224 LIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIDTF 403
+ V L + ++E L+ + V GP+ S + KD T GFGFV F EEDA AI
Sbjct: 25 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 84
Query: 404 NGYQLRNKRLKVSYARPSGDDIK-ETNLYVTNLPRAITDDQLETIFGKYGRIVQ-KHILR 577
N +L K +KV+ A ++ N++V NL + + L F +G I+Q I+R
Sbjct: 85 NMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMR 144
Query: 578 DKNSGT 595
D +SGT
Sbjct: 145 DVDSGT 150
Score = 53.6 bits (123), Expect = 1e-07
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +2
Query: 221 NLIVNYLPQNITEKDLYAMFVTIGPI-ESCRVMKDFKTGYSYGFGFVNFTREEDAARAID 397
N+ V L + EK LY F G I + ++M+D +G S GF F+NF E + A++
Sbjct: 111 NIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALE 170
Query: 398 TFNGYQLRNKRLKVSYA 448
NG L N+ + VSYA
Sbjct: 171 AMNGQFLCNRAITVSYA 187
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 68.5 bits (160), Expect = 3e-12
Identities = 43/126 (34%), Positives = 63/126 (50%), Gaps = 8/126 (6%)
Frame = +2
Query: 221 NLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIDT 400
N+ + L + I K +Y F G I SC+V D + G+S G+GFV+F EE A AI
Sbjct: 58 NIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAID-EDGFSKGYGFVHFETEEAAQNAIQK 116
Query: 401 FNGYQLRNKRLKVSYARPS-------GDDIKE-TNLYVTNLPRAITDDQLETIFGKYGRI 556
NG L K++ V +P G+ K+ TN+YV N + LE +F K+G I
Sbjct: 117 VNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLFAKFGNI 176
Query: 557 VQKHIL 574
++
Sbjct: 177 TSCEVM 182
Score = 56.4 bits (130), Expect = 1e-08
Identities = 46/150 (30%), Positives = 67/150 (44%), Gaps = 22/150 (14%)
Frame = +2
Query: 203 GDTAR--TNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREE 376
G+TA+ TN+ V + ++ L +F G I SC VM G S GFGFV F E
Sbjct: 143 GETAKQFTNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMT--VEGKSKGFGFVAFANPE 200
Query: 377 DAARAID-----TFNGYQL------------RNKRLKVSYARPSGDDIKE---TNLYVTN 496
+A A+ T G L R+ LK + + + +++ NLYV N
Sbjct: 201 EAETAVQALHDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKN 260
Query: 497 LPRAITDDQLETIFGKYGRIVQKHILRDKN 586
L + DD L+ F YG I ++ D+N
Sbjct: 261 LDETVDDDGLKKQFESYGNITSAKVMTDEN 290
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 65.7 bits (153), Expect = 2e-11
Identities = 31/80 (38%), Positives = 47/80 (58%)
Frame = +2
Query: 215 RTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAI 394
+ L V +++TEK L A F+ G + + + D+++G GFGFV F EDAA AI
Sbjct: 10 KRTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAI 69
Query: 395 DTFNGYQLRNKRLKVSYARP 454
D N +L K ++V++ARP
Sbjct: 70 DNMNESELFGKTIRVNFARP 89
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 64.5 bits (150), Expect = 5e-11
Identities = 39/120 (32%), Positives = 57/120 (47%)
Frame = +2
Query: 218 TNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAID 397
TNL + L N + L M G I S + + D T G+GFV+F + AA A+D
Sbjct: 107 TNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAVD 166
Query: 398 TFNGYQLRNKRLKVSYARPSGDDIKETNLYVTNLPRAITDDQLETIFGKYGRIVQKHILR 577
N + ++ A+ + TNLY+ NLP T+ LET K+G ++ ILR
Sbjct: 167 GLN-----TEGVQAQMAKLQQQEQDPTNLYIANLPLDFTEQMLETELNKFGMVISTRILR 221
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +2
Query: 476 TNLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDK 583
TNLY+ L DD L + KYG I + DK
Sbjct: 107 TNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDK 142
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 64.5 bits (150), Expect = 5e-11
Identities = 39/120 (32%), Positives = 57/120 (47%)
Frame = +2
Query: 218 TNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAID 397
TNL + L N + L M G I S + + D T G+GFV+F + AA A+D
Sbjct: 81 TNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAVD 140
Query: 398 TFNGYQLRNKRLKVSYARPSGDDIKETNLYVTNLPRAITDDQLETIFGKYGRIVQKHILR 577
N + ++ A+ + TNLY+ NLP T+ LET K+G ++ ILR
Sbjct: 141 GLN-----TEGVQAQMAKLQQQEQDPTNLYIANLPLDFTEQMLETELNKFGMVISTRILR 195
Score = 31.1 bits (67), Expect = 0.62
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 7/54 (12%)
Frame = +2
Query: 443 YARPSGDD-------IKETNLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDK 583
Y P GD + TNLY+ L DD L + KYG I + DK
Sbjct: 63 YTAPRGDQQHHDSTPLSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDK 116
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 61.3 bits (142), Expect = 5e-10
Identities = 38/102 (37%), Positives = 50/102 (49%)
Frame = +2
Query: 134 GRAGSNARYWGSMSEGGGLSAAGGDTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRV 313
G G A + G G G D A NL + +LPQ+ + DL F G I S +V
Sbjct: 310 GGVGVQATTSAAQMVGNG-DVKGPDGA--NLFIYHLPQDFGDSDLINTFAPFGGILSAKV 366
Query: 314 MKDFKTGYSYGFGFVNFTREEDAARAIDTFNGYQLRNKRLKV 439
D T S FGFV++ + A AI NG+Q+ +KRLKV
Sbjct: 367 FIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKV 408
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 61.3 bits (142), Expect = 5e-10
Identities = 38/102 (37%), Positives = 50/102 (49%)
Frame = +2
Query: 134 GRAGSNARYWGSMSEGGGLSAAGGDTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRV 313
G G A + G G G D A NL + +LPQ+ + DL F G I S +V
Sbjct: 474 GGVGVQATTSAAQMVGNG-DVKGPDGA--NLFIYHLPQDFGDSDLINTFAPFGGILSAKV 530
Query: 314 MKDFKTGYSYGFGFVNFTREEDAARAIDTFNGYQLRNKRLKV 439
D T S FGFV++ + A AI NG+Q+ +KRLKV
Sbjct: 531 FIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKV 572
Score = 56.8 bits (131), Expect = 1e-08
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 1/128 (0%)
Frame = +2
Query: 206 DTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAA 385
DT + V +P+ E D +F G + SC +++D T S G FV F +DA
Sbjct: 51 DTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAI 110
Query: 386 RAIDTFNGYQLRNKRLKVSYARPSGDDIK-ETNLYVTNLPRAITDDQLETIFGKYGRIVQ 562
A + ++ +P+ + + E L++ L + ++ L IF K+G I
Sbjct: 111 EAQGALHNIKVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLREIFAKFGHIED 170
Query: 563 KHILRDKN 586
+LRD++
Sbjct: 171 CSVLRDQD 178
Score = 34.3 bits (75), Expect = 0.067
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 452 PSGDDIKETNLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNS 589
PS D ++V +PR + +F KYG + +ILRDK++
Sbjct: 47 PSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKST 92
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 61.3 bits (142), Expect = 5e-10
Identities = 38/102 (37%), Positives = 50/102 (49%)
Frame = +2
Query: 134 GRAGSNARYWGSMSEGGGLSAAGGDTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRV 313
G G A + G G G D A NL + +LPQ+ + DL F G I S +V
Sbjct: 474 GGVGVQATTSAAQMVGNG-DVKGPDGA--NLFIYHLPQDFGDSDLINTFAPFGGILSAKV 530
Query: 314 MKDFKTGYSYGFGFVNFTREEDAARAIDTFNGYQLRNKRLKV 439
D T S FGFV++ + A AI NG+Q+ +KRLKV
Sbjct: 531 FIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKV 572
Score = 56.8 bits (131), Expect = 1e-08
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 1/128 (0%)
Frame = +2
Query: 206 DTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAA 385
DT + V +P+ E D +F G + SC +++D T S G FV F +DA
Sbjct: 51 DTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAI 110
Query: 386 RAIDTFNGYQLRNKRLKVSYARPSGDDIK-ETNLYVTNLPRAITDDQLETIFGKYGRIVQ 562
A + ++ +P+ + + E L++ L + ++ L IF K+G I
Sbjct: 111 EAQGALHNIKVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLREIFAKFGHIED 170
Query: 563 KHILRDKN 586
+LRD++
Sbjct: 171 CSVLRDQD 178
Score = 34.3 bits (75), Expect = 0.067
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 452 PSGDDIKETNLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNS 589
PS D ++V +PR + +F KYG + +ILRDK++
Sbjct: 47 PSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKST 92
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 61.3 bits (142), Expect = 5e-10
Identities = 38/102 (37%), Positives = 50/102 (49%)
Frame = +2
Query: 134 GRAGSNARYWGSMSEGGGLSAAGGDTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRV 313
G G A + G G G D A NL + +LPQ+ + DL F G I S +V
Sbjct: 403 GGVGVQATTSAAQMVGNG-DVKGPDGA--NLFIYHLPQDFGDSDLINTFAPFGGILSAKV 459
Query: 314 MKDFKTGYSYGFGFVNFTREEDAARAIDTFNGYQLRNKRLKV 439
D T S FGFV++ + A AI NG+Q+ +KRLKV
Sbjct: 460 FIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKV 501
Score = 56.8 bits (131), Expect = 1e-08
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 1/128 (0%)
Frame = +2
Query: 206 DTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAA 385
DT + V +P+ E D +F G + SC +++D T S G FV F +DA
Sbjct: 51 DTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAI 110
Query: 386 RAIDTFNGYQLRNKRLKVSYARPSGDDIK-ETNLYVTNLPRAITDDQLETIFGKYGRIVQ 562
A + ++ +P+ + + E L++ L + ++ L IF K+G I
Sbjct: 111 EAQGALHNIKVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLREIFAKFGHIED 170
Query: 563 KHILRDKN 586
+LRD++
Sbjct: 171 CSVLRDQD 178
Score = 34.3 bits (75), Expect = 0.067
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 452 PSGDDIKETNLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNS 589
PS D ++V +PR + +F KYG + +ILRDK++
Sbjct: 47 PSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKST 92
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 61.3 bits (142), Expect = 5e-10
Identities = 38/102 (37%), Positives = 50/102 (49%)
Frame = +2
Query: 134 GRAGSNARYWGSMSEGGGLSAAGGDTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRV 313
G G A + G G G D A NL + +LPQ+ + DL F G I S +V
Sbjct: 474 GGVGVQATTSAAQMVGNG-DVKGPDGA--NLFIYHLPQDFGDSDLINTFAPFGGILSAKV 530
Query: 314 MKDFKTGYSYGFGFVNFTREEDAARAIDTFNGYQLRNKRLKV 439
D T S FGFV++ + A AI NG+Q+ +KRLKV
Sbjct: 531 FIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKV 572
Score = 56.8 bits (131), Expect = 1e-08
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 1/128 (0%)
Frame = +2
Query: 206 DTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAA 385
DT + V +P+ E D +F G + SC +++D T S G FV F +DA
Sbjct: 51 DTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAI 110
Query: 386 RAIDTFNGYQLRNKRLKVSYARPSGDDIK-ETNLYVTNLPRAITDDQLETIFGKYGRIVQ 562
A + ++ +P+ + + E L++ L + ++ L IF K+G I
Sbjct: 111 EAQGALHNIKVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLREIFAKFGHIED 170
Query: 563 KHILRDKN 586
+LRD++
Sbjct: 171 CSVLRDQD 178
Score = 34.3 bits (75), Expect = 0.067
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 452 PSGDDIKETNLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNS 589
PS D ++V +PR + +F KYG + +ILRDK++
Sbjct: 47 PSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKST 92
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 60.9 bits (141), Expect = 7e-10
Identities = 31/81 (38%), Positives = 42/81 (51%)
Frame = +2
Query: 221 NLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIDT 400
NL + +LPQ + +L MF G I S +V D T S FGFV++ + AI
Sbjct: 430 NLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITA 489
Query: 401 FNGYQLRNKRLKVSYARPSGD 463
NG+Q+ KRLKV RP +
Sbjct: 490 MNGFQIGMKRLKVQLKRPRNE 510
Score = 53.6 bits (123), Expect = 1e-07
Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 9/133 (6%)
Frame = +2
Query: 206 DTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAA 385
D L V +P+N+ EKDL +F G I ++KD TG G F+ + + A
Sbjct: 25 DPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAV 84
Query: 386 RAIDTFNGYQL---RNKRLKVSYA----RPSG--DDIKETNLYVTNLPRAITDDQLETIF 538
R T + + N+ ++V A RP+ D + + L++ L + ++D++ +F
Sbjct: 85 RCQATLHDQKTLPGMNRAMQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALF 144
Query: 539 GKYGRIVQKHILR 577
+G + + +LR
Sbjct: 145 ATFGELDEVTVLR 157
Score = 31.9 bits (69), Expect = 0.36
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +2
Query: 482 LYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNSG 592
L+V +PR + + L +F ++G+I + IL+DK +G
Sbjct: 31 LFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTG 67
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 479 NLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDK 583
NL++ +LP+ D +L +F +G IV + D+
Sbjct: 430 NLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDR 464
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 60.9 bits (141), Expect = 7e-10
Identities = 31/81 (38%), Positives = 42/81 (51%)
Frame = +2
Query: 221 NLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIDT 400
NL + +LPQ + +L MF G I S +V D T S FGFV++ + AI
Sbjct: 430 NLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITA 489
Query: 401 FNGYQLRNKRLKVSYARPSGD 463
NG+Q+ KRLKV RP +
Sbjct: 490 MNGFQIGMKRLKVQLKRPRNE 510
Score = 53.6 bits (123), Expect = 1e-07
Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 9/133 (6%)
Frame = +2
Query: 206 DTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAA 385
D L V +P+N+ EKDL +F G I ++KD TG G F+ + + A
Sbjct: 25 DPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAV 84
Query: 386 RAIDTFNGYQL---RNKRLKVSYA----RPSG--DDIKETNLYVTNLPRAITDDQLETIF 538
R T + + N+ ++V A RP+ D + + L++ L + ++D++ +F
Sbjct: 85 RCQATLHDQKTLPGMNRAMQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALF 144
Query: 539 GKYGRIVQKHILR 577
+G + + +LR
Sbjct: 145 ATFGELDEVTVLR 157
Score = 31.9 bits (69), Expect = 0.36
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +2
Query: 482 LYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNSG 592
L+V +PR + + L +F ++G+I + IL+DK +G
Sbjct: 31 LFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTG 67
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 479 NLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDK 583
NL++ +LP+ D +L +F +G IV + D+
Sbjct: 430 NLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDR 464
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 60.5 bits (140), Expect = 9e-10
Identities = 34/116 (29%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
Frame = +2
Query: 164 GSMSEGGGLSAAGGDTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSY 343
G+ + G + G +L V L ++ E L+ F GP+ S RV +D T S
Sbjct: 14 GAAAPQPGQNQTGSSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSL 73
Query: 344 GFGFVNFTREEDAARAIDTFNGYQLRNKRLKVSYAR--PSGDDIKETNLYVTNLPR 505
G+ +VNF + DA RA+DT N L K +++ +++ P+ N+++ NL +
Sbjct: 74 GYAYVNFQQPADAERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDK 129
Score = 56.4 bits (130), Expect = 1e-08
Identities = 46/150 (30%), Positives = 67/150 (44%), Gaps = 22/150 (14%)
Frame = +2
Query: 203 GDTAR--TNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREE 376
G+TA+ TN+ V + ++ L +F G I SC VM G S GFGFV F E
Sbjct: 146 GETAKQFTNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMT--VEGKSKGFGFVAFANPE 203
Query: 377 DAARAID-----TFNGYQL------------RNKRLKVSYARPSGDDIKE---TNLYVTN 496
+A A+ T G L R+ LK + + + +++ NLYV N
Sbjct: 204 EAETAVQALHDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKN 263
Query: 497 LPRAITDDQLETIFGKYGRIVQKHILRDKN 586
L + DD L+ F YG I ++ D+N
Sbjct: 264 LDETVDDDGLKKQFESYGNITSAKVMTDEN 293
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 59.3 bits (137), Expect = 2e-09
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 6/155 (3%)
Frame = +2
Query: 143 GSNARYWGSMSEGGGLSAAGGDTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKD 322
G NAR ++E G G L V L +TE + +F IG + +V+ D
Sbjct: 21 GYNARMHSKLAEREGFHLGNGSDEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD 80
Query: 323 FKTGYSYGFGFVNFTREEDAARAIDTFNGYQLRNKRLKVSYARPSG------DDIKETNL 484
G + + FV F+ A++A+ T N L ++ +KV++A G D + ++
Sbjct: 81 ---GSNDPYAFVEFSDHGQASQALQTMNKRLLLDREMKVNWAVEPGQQQSKIDTTRHFHV 137
Query: 485 YVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNS 589
+V +L + + +L F +G + ++RD N+
Sbjct: 138 FVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNT 172
Score = 56.8 bits (131), Expect = 1e-08
Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 21/145 (14%)
Frame = +2
Query: 206 DTART-NLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDA 382
DT R ++ V L + + L F G + +V++D T S G+GFV++ + E+A
Sbjct: 130 DTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEA 189
Query: 383 ARAIDTFNGYQLRNKRLKVSYA-RPSGDDIK-------------------ETNLYVTNLP 502
RAI+ NG L + ++ ++A R GD K T++YV N+
Sbjct: 190 ERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNI- 248
Query: 503 RAITDDQLETIFGKYGRIVQKHILR 577
++T+D++ F +GRI + I +
Sbjct: 249 ASLTEDEIRQGFASFGRITEVRIFK 273
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 56.8 bits (131), Expect = 1e-08
Identities = 29/77 (37%), Positives = 41/77 (53%)
Frame = +2
Query: 221 NLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIDT 400
++ V P TE DL F G + + R++ D +TG GF FV FT E A RA+D
Sbjct: 5 SVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQ 64
Query: 401 FNGYQLRNKRLKVSYAR 451
FNG + L+V+ A+
Sbjct: 65 FNGVDFNGRALRVNLAQ 81
Score = 27.9 bits (59), Expect = 5.8
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +2
Query: 479 NLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNSG 592
++YV N P T+D L F + G + I+ D+ +G
Sbjct: 5 SVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETG 42
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 56.8 bits (131), Expect = 1e-08
Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 21/145 (14%)
Frame = +2
Query: 206 DTART-NLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDA 382
DT R ++ V L + + L F G + +V++D T S G+GFV++ + E+A
Sbjct: 17 DTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEA 76
Query: 383 ARAIDTFNGYQLRNKRLKVSYA-RPSGDDIK-------------------ETNLYVTNLP 502
RAI+ NG L + ++ ++A R GD K T++YV N+
Sbjct: 77 ERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNI- 135
Query: 503 RAITDDQLETIFGKYGRIVQKHILR 577
++T+D++ F +GRI + I +
Sbjct: 136 ASLTEDEIRQGFASFGRITEVRIFK 160
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 56.8 bits (131), Expect = 1e-08
Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 21/145 (14%)
Frame = +2
Query: 206 DTART-NLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDA 382
DT R ++ V L + + L F G + +V++D T S G+GFV++ + E+A
Sbjct: 27 DTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEA 86
Query: 383 ARAIDTFNGYQLRNKRLKVSYA-RPSGDDIK-------------------ETNLYVTNLP 502
RAI+ NG L + ++ ++A R GD K T++YV N+
Sbjct: 87 ERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNI- 145
Query: 503 RAITDDQLETIFGKYGRIVQKHILR 577
++T+D++ F +GRI + I +
Sbjct: 146 ASLTEDEIRQGFASFGRITEVRIFK 170
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 56.8 bits (131), Expect = 1e-08
Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 21/145 (14%)
Frame = +2
Query: 206 DTART-NLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDA 382
DT R ++ V L + + L F G + +V++D T S G+GFV++ + E+A
Sbjct: 98 DTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEA 157
Query: 383 ARAIDTFNGYQLRNKRLKVSYA-RPSGDDIK-------------------ETNLYVTNLP 502
RAI+ NG L + ++ ++A R GD K T++YV N+
Sbjct: 158 ERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNI- 216
Query: 503 RAITDDQLETIFGKYGRIVQKHILR 577
++T+D++ F +GRI + I +
Sbjct: 217 ASLTEDEIRQGFASFGRITEVRIFK 241
Score = 31.1 bits (67), Expect = 0.62
Identities = 28/111 (25%), Positives = 47/111 (42%), Gaps = 4/111 (3%)
Frame = +2
Query: 143 GSNARYWGSMSEGGGLSAAGGDTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKD 322
G NAR ++E G G L V L +TE + +F IG + +V+ D
Sbjct: 21 GYNARMHSKLAEREGFHLGNGSDEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD 80
Query: 323 -FKTGYSYGFGFVNFTREEDAARAIDTFNG---YQLRNKRLKVSYARPSGD 463
K ++ G + D R F G ++ N++L+ ++ +P GD
Sbjct: 81 EMKVNWAVEPG--QQQSKIDTTRHFHVFVGDLSSEVDNQKLREAF-QPFGD 128
Score = 31.1 bits (67), Expect = 0.62
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +2
Query: 455 SGDDIKETNLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDK 583
+G D T LYV NL +T+D + T+F + G + + ++ D+
Sbjct: 40 NGSDEPRT-LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDE 81
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 56.8 bits (131), Expect = 1e-08
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 1/128 (0%)
Frame = +2
Query: 206 DTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAA 385
DT + V +P+ E D +F G + SC +++D T S G FV F +DA
Sbjct: 51 DTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAI 110
Query: 386 RAIDTFNGYQLRNKRLKVSYARPSGDDIK-ETNLYVTNLPRAITDDQLETIFGKYGRIVQ 562
A + ++ +P+ + + E L++ L + ++ L IF K+G I
Sbjct: 111 EAQGALHNIKVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLREIFAKFGHIED 170
Query: 563 KHILRDKN 586
+LRD++
Sbjct: 171 CSVLRDQD 178
Score = 34.3 bits (75), Expect = 0.067
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 452 PSGDDIKETNLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNS 589
PS D ++V +PR + +F KYG + +ILRDK++
Sbjct: 47 PSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKST 92
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 56.8 bits (131), Expect = 1e-08
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 1/128 (0%)
Frame = +2
Query: 206 DTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAA 385
DT + V +P+ E D +F G + SC +++D T S G FV F +DA
Sbjct: 51 DTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAI 110
Query: 386 RAIDTFNGYQLRNKRLKVSYARPSGDDIK-ETNLYVTNLPRAITDDQLETIFGKYGRIVQ 562
A + ++ +P+ + + E L++ L + ++ L IF K+G I
Sbjct: 111 EAQGALHNIKVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLREIFAKFGHIED 170
Query: 563 KHILRDKN 586
+LRD++
Sbjct: 171 CSVLRDQD 178
Score = 34.3 bits (75), Expect = 0.067
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 452 PSGDDIKETNLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNS 589
PS D ++V +PR + +F KYG + +ILRDK++
Sbjct: 47 PSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKST 92
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 56.8 bits (131), Expect = 1e-08
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 1/128 (0%)
Frame = +2
Query: 206 DTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAA 385
DT + V +P+ E D +F G + SC +++D T S G FV F +DA
Sbjct: 51 DTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAI 110
Query: 386 RAIDTFNGYQLRNKRLKVSYARPSGDDIK-ETNLYVTNLPRAITDDQLETIFGKYGRIVQ 562
A + ++ +P+ + + E L++ L + ++ L IF K+G I
Sbjct: 111 EAQGALHNIKVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLREIFAKFGHIED 170
Query: 563 KHILRDKN 586
+LRD++
Sbjct: 171 CSVLRDQD 178
Score = 34.3 bits (75), Expect = 0.067
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 452 PSGDDIKETNLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNS 589
PS D ++V +PR + +F KYG + +ILRDK++
Sbjct: 47 PSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKST 92
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 56.4 bits (130), Expect = 1e-08
Identities = 25/76 (32%), Positives = 43/76 (56%)
Frame = +2
Query: 221 NLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIDT 400
++ V +P TE+++ F +G + + R++ D +TG GF FV F+ E A RA++
Sbjct: 7 SVYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQ 66
Query: 401 FNGYQLRNKRLKVSYA 448
NG + L+V+YA
Sbjct: 67 LNGVAFNGRNLRVNYA 82
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 56.0 bits (129), Expect = 2e-08
Identities = 30/76 (39%), Positives = 41/76 (53%)
Frame = +2
Query: 230 VNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIDTFNG 409
V LPQ + E +L +F IG + + +D TG GF FV F +DAARAI N
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELND 239
Query: 410 YQLRNKRLKVSYARPS 457
++ + LKV + RPS
Sbjct: 240 IRMYHMVLKVEWTRPS 255
Score = 43.2 bits (97), Expect = 1e-04
Identities = 18/40 (45%), Positives = 27/40 (67%)
Frame = +2
Query: 473 ETNLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNSG 592
E VTNLP+ + +D+L +FGK GR+++ I RDK +G
Sbjct: 175 ENTCRVTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTG 214
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 55.2 bits (127), Expect = 3e-08
Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 9/158 (5%)
Frame = +2
Query: 143 GSNARYWGSMSEGGGLSAAGGDTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKD 322
G N R ++E G A G L V L IT++ L +F IG + +++ +
Sbjct: 15 GFNPRVHARIAEREGFQLASGSEDPRTLFVANLDPAITDEFLATLFNQIGAVMKAKIIFE 74
Query: 323 FKTGYSYGFGFVNFTREEDAARAIDTFNGYQLRNKRLKVSYA---------RPSGDDIKE 475
G + + FV F+ A A+ + NG +L K + V++A R + +
Sbjct: 75 ---GLNDPYAFVEFSDHNQATLALQSHNGRELLEKEMHVTWAFEPREPGENRSKPETSRH 131
Query: 476 TNLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNS 589
+++V +L I +L F K+G + + I+RD N+
Sbjct: 132 FHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNT 169
Score = 54.8 bits (126), Expect = 4e-08
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Frame = +2
Query: 161 WGSMSEGGGLSAAGGDTART-NLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGY 337
W G + + +T+R ++ V L I L FV G + ++++D T
Sbjct: 112 WAFEPREPGENRSKPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNK 171
Query: 338 SYGFGFVNFTREEDAARAIDTFNGYQLRNKRLKVSYARPSGDD 466
G+GFV++ R EDA RAID NG L + ++ ++A D+
Sbjct: 172 GKGYGFVSYPRREDAERAIDEMNGAWLGRRTIRTNWATRKPDE 214
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 54.8 bits (126), Expect = 4e-08
Identities = 35/141 (24%), Positives = 73/141 (51%), Gaps = 17/141 (12%)
Frame = +2
Query: 206 DTART-NLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDA 382
DT++ ++ V L ++++ + L + F G + +V++D +T S G+GFV+F +++A
Sbjct: 130 DTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNA 189
Query: 383 ARAIDTFNGYQLRNKRLKVSY-ARPSGDDIKE---------------TNLYVTNLPRAIT 514
AI NG + + ++ ++ AR + ++ ++ T++YV N+ + T
Sbjct: 190 ENAIAGMNGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISQQTT 249
Query: 515 DDQLETIFGKYGRIVQKHILR 577
D L +F YG I + I +
Sbjct: 250 DADLRDLFSTYGDIAEVRIFK 270
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 54.0 bits (124), Expect = 8e-08
Identities = 28/93 (30%), Positives = 50/93 (53%)
Frame = +2
Query: 170 MSEGGGLSAAGGDTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGF 349
MS G S G D ++ ++ V + +++E + ++F G + S +++ D +TG G+
Sbjct: 2 MSGGYKSSGVGNDRSQRSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGY 61
Query: 350 GFVNFTREEDAARAIDTFNGYQLRNKRLKVSYA 448
GF+ F + A AI NGY+L + L+V A
Sbjct: 62 GFIEFPDIQTAEVAIRNLNGYELSGRILRVDSA 94
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/76 (34%), Positives = 42/76 (55%)
Frame = +2
Query: 221 NLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIDT 400
++ V P TE++L F +IG I + R++ D +TG GF F+ F E A RA++
Sbjct: 6 SVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQ 65
Query: 401 FNGYQLRNKRLKVSYA 448
NG + + L+V+ A
Sbjct: 66 MNGAEFNGRPLRVNLA 81
Score = 27.9 bits (59), Expect = 5.8
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +2
Query: 479 NLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNSG 592
++YV N P T+++L F G+I I+ D+ +G
Sbjct: 6 SVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETG 43
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 50.4 bits (115), Expect = 1e-06
Identities = 31/86 (36%), Positives = 45/86 (52%)
Frame = +2
Query: 191 SAAGGDTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTR 370
S++ D R L V+ +P E DL AMF +GP+ ++ F S GFGFV
Sbjct: 92 SSSSTDGPR-RLHVSNIPFKYREPDLTAMFEKVGPVVDVEII--FNERGSKGFGFVTMQN 148
Query: 371 EEDAARAIDTFNGYQLRNKRLKVSYA 448
+DA RA FNG + +R++V+ A
Sbjct: 149 PDDADRARAEFNGTTIEGRRVEVNLA 174
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 50.4 bits (115), Expect = 1e-06
Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Frame = +2
Query: 170 MSEGGG--LSAAGGDTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSY 343
MS GGG AA T+L ++ L T DL F G I + +D + S
Sbjct: 1 MSRGGGGDRRAAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSK 60
Query: 344 GFGFVNFTREEDAARAIDTFNGYQLRNKRLKVS---YARPSGD 463
GFGFV F DA A+D +G + + L+V+ Y RPS +
Sbjct: 61 GFGFVRFYERRDAEHALDRTDGKLVDGRELRVTLAKYDRPSDE 103
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +2
Query: 476 TNLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNS 589
T+L + NL T + L F +YG I HI RDK S
Sbjct: 19 TSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYS 56
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 50.4 bits (115), Expect = 1e-06
Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Frame = +2
Query: 170 MSEGGG--LSAAGGDTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSY 343
MS GGG AA T+L ++ L T DL F G I + +D + S
Sbjct: 1 MSRGGGGDRRAAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSK 60
Query: 344 GFGFVNFTREEDAARAIDTFNGYQLRNKRLKVS---YARPSGD 463
GFGFV F DA A+D +G + + L+V+ Y RPS +
Sbjct: 61 GFGFVRFYERRDAEHALDRTDGKLVDGRELRVTLAKYDRPSDE 103
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +2
Query: 476 TNLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNS 589
T+L + NL T + L F +YG I HI RDK S
Sbjct: 19 TSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYS 56
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 50.4 bits (115), Expect = 1e-06
Identities = 31/86 (36%), Positives = 45/86 (52%)
Frame = +2
Query: 191 SAAGGDTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTR 370
S++ D R L V+ +P E DL AMF +GP+ ++ F S GFGFV
Sbjct: 92 SSSSTDGPR-RLHVSNIPFKYREPDLTAMFEKVGPVVDVEII--FNERGSKGFGFVTMQN 148
Query: 371 EEDAARAIDTFNGYQLRNKRLKVSYA 448
+DA RA FNG + +R++V+ A
Sbjct: 149 PDDADRARAEFNGTTIEGRRVEVNLA 174
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 48.4 bits (110), Expect = 4e-06
Identities = 31/82 (37%), Positives = 37/82 (45%)
Frame = +2
Query: 218 TNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAID 397
T LIV LP TE+ L F G I +K K G GF FV F E A+ A+
Sbjct: 3 TRLIVKNLPSTCTEQQLRKFFEKYGQISDAS-LKYTKEGKFRGFAFVGFLDEGSASNALA 61
Query: 398 TFNGYQLRNKRLKVSYARPSGD 463
N +K+L V RP GD
Sbjct: 62 KSNQTFFNSKKLTVEECRPFGD 83
Score = 41.9 bits (94), Expect = 3e-04
Identities = 22/72 (30%), Positives = 32/72 (44%)
Frame = +2
Query: 224 LIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIDTF 403
L + LP E DL +F G + +V+ D KTG GF V F E A A
Sbjct: 281 LFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEAAVAAYSAL 340
Query: 404 NGYQLRNKRLKV 439
+GY + + + +
Sbjct: 341 DGYVFKGRMMHI 352
Score = 37.9 bits (84), Expect = 0.005
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 3/114 (2%)
Frame = +2
Query: 260 KDLYAMFVTIGPIESCR--VMKDFKTGYSYGFGFVNFTREEDAARAIDTFNGYQLRNKRL 433
+D+ A FVT R + KD + + G E I+ +G L ++
Sbjct: 208 EDVAAAFVTFNRPPDVRRALQKDGQFLGGFKIGIEKIETPEPEHEVIEE-HGASLESRDK 266
Query: 434 KVSYARPSGDDIKETN-LYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNSG 592
+ R + I ET L++ NLP A +D L+ +F KYG + + ++ DK +G
Sbjct: 267 EEETVR---EKILETGRLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTG 317
Score = 31.9 bits (69), Expect = 0.36
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Frame = +2
Query: 338 SYGFGFVNFTREEDAARAIDTFNGYQL--RNKRLKVSYARPSGD-------DIKE----- 475
S GFGFV F DA A+ G L + LK+S+ R + D ++K+
Sbjct: 688 SMGFGFVQFYTAFDAKTALKDMQGELLDGHSLELKISH-RENADKGALKRKEVKQKEQGE 746
Query: 476 -TNLYVTNLPRAITDDQLETIFGKYGRI 556
T L V NLP + ++ET+F +G +
Sbjct: 747 CTKLLVRNLPFEASVKEVETLFETFGAV 774
Score = 31.5 bits (68), Expect = 0.47
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +2
Query: 476 TNLYVTNLPRAITDDQLETIFGKYGRI 556
T L V NLP T+ QL F KYG+I
Sbjct: 3 TRLIVKNLPSTCTEQQLRKFFEKYGQI 29
>Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical
protein T11G6.8 protein.
Length = 408
Score = 48.4 bits (110), Expect = 4e-06
Identities = 34/104 (32%), Positives = 48/104 (46%), Gaps = 5/104 (4%)
Frame = +2
Query: 206 DTARTNLIVNYL----PQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTRE 373
DT T L + L Q +TEKDL F G I RV+ + G F+ FT
Sbjct: 231 DTTITTLYIGNLGPSGAQQVTEKDLNDFFYQYGDIRCLRVLTE------KGCAFIEFTTR 284
Query: 374 EDAARAID-TFNGYQLRNKRLKVSYARPSGDDIKETNLYVTNLP 502
E A RA + +FN ++ KRL + + P + + YVT +P
Sbjct: 285 EAAERAAERSFNKTFIKGKRLTIRWGEPQAKRAADNSNYVTPVP 328
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 48.4 bits (110), Expect = 4e-06
Identities = 38/125 (30%), Positives = 56/125 (44%), Gaps = 5/125 (4%)
Frame = +2
Query: 224 LIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFT--REEDAA--RA 391
+ V L N T+ + + G I VM+D T S GFGFV F+ E DAA +
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQR 84
Query: 392 IDTFNGYQLRNKR-LKVSYARPSGDDIKETNLYVTNLPRAITDDQLETIFGKYGRIVQKH 568
+G + KR + S ++ LYV+ + T+D L F KYG + +
Sbjct: 85 PHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSE 144
Query: 569 ILRDK 583
I+ DK
Sbjct: 145 IILDK 149
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 48.4 bits (110), Expect = 4e-06
Identities = 38/125 (30%), Positives = 56/125 (44%), Gaps = 5/125 (4%)
Frame = +2
Query: 224 LIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFT--REEDAA--RA 391
+ V L N T+ + + G I VM+D T S GFGFV F+ E DAA +
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQR 84
Query: 392 IDTFNGYQLRNKR-LKVSYARPSGDDIKETNLYVTNLPRAITDDQLETIFGKYGRIVQKH 568
+G + KR + S ++ LYV+ + T+D L F KYG + +
Sbjct: 85 PHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSE 144
Query: 569 ILRDK 583
I+ DK
Sbjct: 145 IILDK 149
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 48.4 bits (110), Expect = 4e-06
Identities = 38/125 (30%), Positives = 56/125 (44%), Gaps = 5/125 (4%)
Frame = +2
Query: 224 LIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFT--REEDAA--RA 391
+ V L N T+ + + G I VM+D T S GFGFV F+ E DAA +
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQR 84
Query: 392 IDTFNGYQLRNKR-LKVSYARPSGDDIKETNLYVTNLPRAITDDQLETIFGKYGRIVQKH 568
+G + KR + S ++ LYV+ + T+D L F KYG + +
Sbjct: 85 PHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSE 144
Query: 569 ILRDK 583
I+ DK
Sbjct: 145 IILDK 149
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 47.6 bits (108), Expect = 7e-06
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +2
Query: 224 LIVNYLPQNITEKDLYAMF-VTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIDT 400
+ V LP ITE L F IGP+E+ R+++D TG GF FVNF ++ + A+ +
Sbjct: 248 IFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVSLAL-S 306
Query: 401 FNGYQLRNKRLKVSYARPSG 460
++ + L+++ G
Sbjct: 307 METIKMEKRDLRITKVMKKG 326
Score = 40.7 bits (91), Expect = 8e-04
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Frame = +2
Query: 353 FVNFTREEDAARAIDTFNGYQLRNKRLKVSYARPSGDDI-KETNLYVTNLPRAITDDQLE 529
+V F EE +A+ +NG +L + ++V + K+ ++V NLP IT+D L
Sbjct: 205 YVKFGAEESVEKALK-YNGTKLDDHVIRVDKVGSKKKEFGKDMAIFVGNLPFEITEDALI 263
Query: 530 TIF-GKYGRIVQKHILRDKNSG 592
T F + G + I+RDK++G
Sbjct: 264 TFFSAQIGPVEAVRIVRDKDTG 285
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 46.8 bits (106), Expect = 1e-05
Identities = 37/118 (31%), Positives = 50/118 (42%), Gaps = 12/118 (10%)
Frame = +2
Query: 131 RGRAGSNARYWGSMSEGGGLSAAGGDTARTNLIVNYLPQ--------NI----TEKDLYA 274
R R S +R + GGG GG R PQ N+ TEKDL
Sbjct: 35 RERESSRSRSPRARYGGGGGGGGGGGRGRNQQYDRENPQPSKCLGVFNLSSYTTEKDLRD 94
Query: 275 MFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIDTFNGYQLRNKRLKVSYA 448
+F G I C ++ D +G S GFGF+ F EDA A D L +++V ++
Sbjct: 95 VFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAARDKLCNTDLDGHKIRVDFS 152
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/95 (25%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Frame = +2
Query: 167 SMSEGGGLSAAGGDTARTN--LIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYS 340
S+ G L + T + + + + L ++E D+ A+F G + + +++D TG S
Sbjct: 19 SLGYAGDLKKSWHQTYKDSAWIYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKS 78
Query: 341 YGFGFVNFTREEDAARAIDTFNGYQLRNKRLKVSY 445
GF F+ + + A+D FNG L + ++V +
Sbjct: 79 KGFAFLCYKDQRSTILAVDNFNGISLHKRMIRVDH 113
Score = 32.3 bits (70), Expect = 0.27
Identities = 10/37 (27%), Positives = 25/37 (67%)
Frame = +2
Query: 482 LYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNSG 592
+Y+ L A+++ + +F +YG ++ +++RDK++G
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTG 76
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 44.8 bits (101), Expect = 5e-05
Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 5/113 (4%)
Frame = +2
Query: 260 KDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFT--REEDAA--RAIDTFNGYQLRNK 427
++ Y+ F G I VM+D T S GFGFV F+ E DAA + +G + K
Sbjct: 2 REFYSQF---GEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPK 58
Query: 428 R-LKVSYARPSGDDIKETNLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDK 583
R + S ++ LYV+ + T+D L F KYG + + I+ DK
Sbjct: 59 RAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDK 111
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 44.8 bits (101), Expect = 5e-05
Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 5/113 (4%)
Frame = +2
Query: 260 KDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFT--REEDAA--RAIDTFNGYQLRNK 427
++ Y+ F G I VM+D T S GFGFV F+ E DAA + +G + K
Sbjct: 2 REFYSQF---GEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPK 58
Query: 428 R-LKVSYARPSGDDIKETNLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDK 583
R + S ++ LYV+ + T+D L F KYG + + I+ DK
Sbjct: 59 RAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDK 111
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 44.0 bits (99), Expect = 8e-05
Identities = 25/86 (29%), Positives = 40/86 (46%)
Frame = +2
Query: 191 SAAGGDTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTR 370
S + G L V+ +P + DL MF G + ++ F S GFGFV R
Sbjct: 144 STSSGPDGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEII--FNERGSKGFGFVTMER 201
Query: 371 EEDAARAIDTFNGYQLRNKRLKVSYA 448
+DA RA +G + ++++V+ A
Sbjct: 202 PQDAERARQELHGSMIEGRKIEVNCA 227
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 44.0 bits (99), Expect = 8e-05
Identities = 25/86 (29%), Positives = 40/86 (46%)
Frame = +2
Query: 191 SAAGGDTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTR 370
S + G L V+ +P + DL MF G + ++ F S GFGFV R
Sbjct: 144 STSSGPDGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEII--FNERGSKGFGFVTMER 201
Query: 371 EEDAARAIDTFNGYQLRNKRLKVSYA 448
+DA RA +G + ++++V+ A
Sbjct: 202 PQDAERARQELHGSMIEGRKIEVNCA 227
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 42.7 bits (96), Expect = 2e-04
Identities = 27/124 (21%), Positives = 57/124 (45%), Gaps = 4/124 (3%)
Frame = +2
Query: 224 LIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIDTF 403
+ + L T ++L F G + C VM+D T + GFGF+ F + ++
Sbjct: 47 MFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNN- 105
Query: 404 NGYQLRNKRL--KVSYARPSGDDI--KETNLYVTNLPRAITDDQLETIFGKYGRIVQKHI 571
++L K++ KV++ + + + K +++ L T + ++ F YG++ +
Sbjct: 106 REHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAML 165
Query: 572 LRDK 583
+ DK
Sbjct: 166 MFDK 169
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/86 (29%), Positives = 41/86 (47%)
Frame = +2
Query: 203 GDTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDA 382
G + + V LP ++ EK++ +F G I+ D K+G F FV F DA
Sbjct: 4 GGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYV----DIKSGRGPAFAFVEFEDHRDA 59
Query: 383 ARAIDTFNGYQLRNKRLKVSYARPSG 460
A+ +GY+ +R++V + R G
Sbjct: 60 EDAVRARDGYEFDGRRIRVEFTRGVG 85
Score = 32.3 bits (70), Expect = 0.27
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +2
Query: 470 KETNLYVTNLPRAITDDQLETIFGKYGRI 556
++ +YV NLP + + ++E IF KYGRI
Sbjct: 7 EDQKVYVGNLPGDVREKEVEDIFHKYGRI 35
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/86 (29%), Positives = 41/86 (47%)
Frame = +2
Query: 203 GDTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDA 382
G + + V LP ++ EK++ +F G I+ D K+G F FV F DA
Sbjct: 4 GGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYV----DIKSGRGPAFAFVEFEDHRDA 59
Query: 383 ARAIDTFNGYQLRNKRLKVSYARPSG 460
A+ +GY+ +R++V + R G
Sbjct: 60 EDAVRARDGYEFDGRRIRVEFTRGVG 85
Score = 32.3 bits (70), Expect = 0.27
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +2
Query: 470 KETNLYVTNLPRAITDDQLETIFGKYGRI 556
++ +YV NLP + + ++E IF KYGRI
Sbjct: 7 EDQKVYVGNLPGDVREKEVEDIFHKYGRI 35
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 42.7 bits (96), Expect = 2e-04
Identities = 27/124 (21%), Positives = 57/124 (45%), Gaps = 4/124 (3%)
Frame = +2
Query: 224 LIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIDTF 403
+ + L T ++L F G + C VM+D T + GFGF+ F + ++
Sbjct: 47 MFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNN- 105
Query: 404 NGYQLRNKRL--KVSYARPSGDDI--KETNLYVTNLPRAITDDQLETIFGKYGRIVQKHI 571
++L K++ KV++ + + + K +++ L T + ++ F YG++ +
Sbjct: 106 REHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAML 165
Query: 572 LRDK 583
+ DK
Sbjct: 166 MFDK 169
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 41.9 bits (94), Expect = 3e-04
Identities = 21/79 (26%), Positives = 39/79 (49%)
Frame = +2
Query: 224 LIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIDTF 403
+ V + + TE D++ F G I++ + D +TG+ G+ V + +++A AID
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116
Query: 404 NGYQLRNKRLKVSYARPSG 460
N L + +KV + G
Sbjct: 117 NDTDLLGQNVKVDWCFVKG 135
Score = 31.5 bits (68), Expect = 0.47
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2
Query: 482 LYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNSG 592
++VTN+ T+D + F +YG+I H+ D+ +G
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTG 93
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 41.1 bits (92), Expect = 6e-04
Identities = 21/75 (28%), Positives = 37/75 (49%)
Frame = +2
Query: 230 VNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIDTFNG 409
+ +P EK+L F G + RV ++ +TG G+ +V F + A A ++ NG
Sbjct: 36 IKRIPFGFFEKELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGFDNKAVAEIAAESMNG 95
Query: 410 YQLRNKRLKVSYARP 454
Y + +RL + +P
Sbjct: 96 YLMFEQRLGCTVMKP 110
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 40.7 bits (91), Expect = 8e-04
Identities = 24/79 (30%), Positives = 40/79 (50%)
Frame = +2
Query: 224 LIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIDTF 403
+ + L ++EKD+ F G I ++K+ GFGFV F + DA A+
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRDV-LLKN-------GFGFVEFDDKRDAEDAVHDL 56
Query: 404 NGYQLRNKRLKVSYARPSG 460
NG +L +R+ + Y++P G
Sbjct: 57 NGKELGGERVILDYSKPRG 75
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 40.7 bits (91), Expect = 8e-04
Identities = 24/79 (30%), Positives = 40/79 (50%)
Frame = +2
Query: 224 LIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIDTF 403
+ + L ++EKD+ F G I ++K+ GFGFV F + DA A+
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRDV-LLKN-------GFGFVEFDDKRDAEDAVHDL 56
Query: 404 NGYQLRNKRLKVSYARPSG 460
NG +L +R+ + Y++P G
Sbjct: 57 NGKELGGERVILDYSKPRG 75
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 40.7 bits (91), Expect = 8e-04
Identities = 24/79 (30%), Positives = 40/79 (50%)
Frame = +2
Query: 224 LIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIDTF 403
+ + L ++EKD+ F G I ++K+ GFGFV F + DA A+
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRDV-LLKN-------GFGFVEFDDKRDAEDAVHDL 56
Query: 404 NGYQLRNKRLKVSYARPSG 460
NG +L +R+ + Y++P G
Sbjct: 57 NGKELGGERVILDYSKPRG 75
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/58 (36%), Positives = 31/58 (53%)
Frame = +2
Query: 275 MFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIDTFNGYQLRNKRLKVSYA 448
MF +GP+ ++ F S GFGFV +DA RA FNG + +R++V+ A
Sbjct: 1 MFEKVGPVVDVEII--FNERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLA 56
>AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical
protein C07H6.4 protein.
Length = 933
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Frame = +2
Query: 185 GLSAAGGDTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVM---KDFKTGYSYGFGF 355
G S D TN+ V+ +P ++TE DL F + GP+ + +++ + + + F
Sbjct: 189 GTSEFDDDPYTTNVYVSNIPHSVTEDDLLFTFGSFGPLAALKILYPRSEEERRRPHICAF 248
Query: 356 VNFTREEDAARAIDTFNGYQLRNKRLKVSYARP 454
V F D R + +RN+ ++ ++ARP
Sbjct: 249 VAFMSRADVDRFMAEVRVIIVRNEPIRFAFARP 281
Score = 38.3 bits (85), Expect = 0.004
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +2
Query: 461 DDIKETNLYVTNLPRAITDDQLETIFGKYGRIVQKHIL 574
DD TN+YV+N+P ++T+D L FG +G + IL
Sbjct: 195 DDPYTTNVYVSNIPHSVTEDDLLFTFGSFGPLAALKIL 232
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 39.5 bits (88), Expect = 0.002
Identities = 35/138 (25%), Positives = 58/138 (42%), Gaps = 17/138 (12%)
Frame = +2
Query: 224 LIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIDTF 403
L++ + ++ +DL F +G + R++ D +TG S G +V F EE +
Sbjct: 27 LLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGL-AL 85
Query: 404 NGYQL-------------RNKRLKVSYARPSG----DDIKETNLYVTNLPRAITDDQLET 532
NG +L RN+ S A G + T++ V NL I + +
Sbjct: 86 NGQRLMGAPLQIQRTCAERNRAANSSVASTLGFVAPGNKGPTHVLVENLHPKIDEKMIRD 145
Query: 533 IFGKYGRIVQKHILRDKN 586
IF +GRI + + D N
Sbjct: 146 IFESFGRIEKIDLEVDSN 163
Score = 37.9 bits (84), Expect = 0.005
Identities = 22/87 (25%), Positives = 43/87 (49%)
Frame = +2
Query: 197 AGGDTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREE 376
A G+ T+++V L I EK + +F + G IE + D + GF + F +
Sbjct: 120 APGNKGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVD-SNRENRGFATITFRNAD 178
Query: 377 DAARAIDTFNGYQLRNKRLKVSYARPS 457
DA ++ + N ++L + +++S + S
Sbjct: 179 DAQKSCEQLNNFELAGRCIRLSIKQES 205
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 39.5 bits (88), Expect = 0.002
Identities = 35/138 (25%), Positives = 58/138 (42%), Gaps = 17/138 (12%)
Frame = +2
Query: 224 LIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIDTF 403
L++ + ++ +DL F +G + R++ D +TG S G +V F EE +
Sbjct: 172 LLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGL-AL 230
Query: 404 NGYQL-------------RNKRLKVSYARPSG----DDIKETNLYVTNLPRAITDDQLET 532
NG +L RN+ S A G + T++ V NL I + +
Sbjct: 231 NGQRLMGAPLQIQRTCAERNRAANSSVASTLGFVAPGNKGPTHVLVENLHPKIDEKMIRD 290
Query: 533 IFGKYGRIVQKHILRDKN 586
IF +GRI + + D N
Sbjct: 291 IFESFGRIEKIDLEVDSN 308
Score = 37.9 bits (84), Expect = 0.005
Identities = 22/87 (25%), Positives = 43/87 (49%)
Frame = +2
Query: 197 AGGDTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREE 376
A G+ T+++V L I EK + +F + G IE + D + GF + F +
Sbjct: 265 APGNKGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVD-SNRENRGFATITFRNAD 323
Query: 377 DAARAIDTFNGYQLRNKRLKVSYARPS 457
DA ++ + N ++L + +++S + S
Sbjct: 324 DAQKSCEQLNNFELAGRCIRLSIKQES 350
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 39.5 bits (88), Expect = 0.002
Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 19/139 (13%)
Frame = +2
Query: 218 TNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAID 397
+ + V + I E L F GPI+S + D TG+ F FV + E A A +
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQE 161
Query: 398 TFNGYQLRNKRLKVS--------------YARPSGDDI-----KETNLYVTNLPRAITDD 520
+ NG L + LKV+ A+P D + K +YV+++ +++
Sbjct: 162 SMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSET 221
Query: 521 QLETIFGKYGRIVQKHILR 577
L+++F +G IV+ + R
Sbjct: 222 DLKSVFEAFGEIVKCQLAR 240
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 39.5 bits (88), Expect = 0.002
Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 19/139 (13%)
Frame = +2
Query: 218 TNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAID 397
+ + V + I E L F GPI+S + D TG+ F FV + E A A +
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQE 161
Query: 398 TFNGYQLRNKRLKVS--------------YARPSGDDI-----KETNLYVTNLPRAITDD 520
+ NG L + LKV+ A+P D + K +YV+++ +++
Sbjct: 162 SMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSET 221
Query: 521 QLETIFGKYGRIVQKHILR 577
L+++F +G IV+ + R
Sbjct: 222 DLKSVFEAFGEIVKCQLAR 240
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 39.5 bits (88), Expect = 0.002
Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 19/139 (13%)
Frame = +2
Query: 218 TNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAID 397
+ + V + I E L F GPI+S + D TG+ F FV + E A A +
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQE 161
Query: 398 TFNGYQLRNKRLKVS--------------YARPSGDDI-----KETNLYVTNLPRAITDD 520
+ NG L + LKV+ A+P D + K +YV+++ +++
Sbjct: 162 SMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSET 221
Query: 521 QLETIFGKYGRIVQKHILR 577
L+++F +G IV+ + R
Sbjct: 222 DLKSVFEAFGEIVKCQLAR 240
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 37.1 bits (82), Expect = 0.009
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +2
Query: 461 DDIKETN-LYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNSG 592
D++ N L+V L TD+ LE IF ++G+I I+RD+ SG
Sbjct: 235 DEVPPENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSG 279
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 37.1 bits (82), Expect = 0.009
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +2
Query: 461 DDIKETN-LYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNSG 592
D++ N L+V L TD+ LE IF ++G+I I+RD+ SG
Sbjct: 235 DEVPPENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSG 279
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 37.1 bits (82), Expect = 0.009
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +2
Query: 461 DDIKETN-LYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNSG 592
D++ N L+V L TD+ LE IF ++G+I I+RD+ SG
Sbjct: 166 DEVPPENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSG 210
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 36.7 bits (81), Expect = 0.013
Identities = 25/115 (21%), Positives = 46/115 (40%)
Frame = +2
Query: 206 DTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAA 385
D A L V +P ++ E+++ +F G +E + T +Y F + A
Sbjct: 165 DEATRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQA 224
Query: 386 RAIDTFNGYQLRNKRLKVSYARPSGDDIKETNLYVTNLPRAITDDQLETIFGKYG 550
+A + + R+K+ Y G L+V L + L+ FG++G
Sbjct: 225 KAEEQDRPIRAGGSRMKIGY----GKSQVSRRLFVGGLGSWCDKEILQKAFGEFG 275
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 36.7 bits (81), Expect = 0.013
Identities = 25/115 (21%), Positives = 46/115 (40%)
Frame = +2
Query: 206 DTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAA 385
D A L V +P ++ E+++ +F G +E + T +Y F + A
Sbjct: 165 DEATRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQA 224
Query: 386 RAIDTFNGYQLRNKRLKVSYARPSGDDIKETNLYVTNLPRAITDDQLETIFGKYG 550
+A + + R+K+ Y G L+V L + L+ FG++G
Sbjct: 225 KAEEQDRPIRAGGSRMKIGY----GKSQVSRRLFVGGLGSWCDKEILQKAFGEFG 275
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 36.7 bits (81), Expect = 0.013
Identities = 25/115 (21%), Positives = 46/115 (40%)
Frame = +2
Query: 206 DTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAA 385
D A L V +P ++ E+++ +F G +E + T +Y F + A
Sbjct: 142 DEATRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQA 201
Query: 386 RAIDTFNGYQLRNKRLKVSYARPSGDDIKETNLYVTNLPRAITDDQLETIFGKYG 550
+A + + R+K+ Y G L+V L + L+ FG++G
Sbjct: 202 KAEEQDRPIRAGGSRMKIGY----GKSQVSRRLFVGGLGSWCDKEILQKAFGEFG 252
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 35.9 bits (79), Expect = 0.022
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = +2
Query: 254 TEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIDTFNGYQLRNKRL 433
T ++ F G + + KD TGY F FV F + E A+ +G RN+++
Sbjct: 58 TVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQKLESVQLAL-VLSGTMFRNRKI 116
Query: 434 KVSYAR 451
V+ R
Sbjct: 117 MVTLKR 122
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 35.1 bits (77), Expect = 0.038
Identities = 18/84 (21%), Positives = 42/84 (50%)
Frame = +2
Query: 224 LIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIDTF 403
L + + + +TE+ L +F ++ + +KD+ F++F +D +A++ +
Sbjct: 379 LYIRNIKEAVTEEKLNELFKEYASLDRVKKVKDY--------AFIHFNERDDCLKAMEEW 430
Query: 404 NGYQLRNKRLKVSYARPSGDDIKE 475
NG +L ++ S A+P + K+
Sbjct: 431 NGKELEGTVVEASLAKPPQEKKKK 454
Score = 29.9 bits (64), Expect = 1.4
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Frame = +2
Query: 344 GFGFVNFTREEDAARAIDTFNGYQLR--NKRLKVSYAR----PSGDDIKETN-LYVTNLP 502
GF FV+F + A+ +++R N + V +A P D + + LY+ N+
Sbjct: 326 GFCFVDFIDHKTASDIKRKIAQHKIRPFNADVYVDWAEHQEEPDEDTMSKVKVLYIRNIK 385
Query: 503 RAITDDQLETIFGKYGRIVQKHILRD 580
A+T+++L +F +Y + + ++D
Sbjct: 386 EAVTEEKLNELFKEYASLDRVKKVKD 411
Score = 27.9 bits (59), Expect = 5.8
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 482 LYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNSG 592
+YV ++P + +D L +F K G+I ++ D SG
Sbjct: 202 IYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSG 238
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 34.7 bits (76), Expect = 0.051
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Frame = +2
Query: 131 RGRAGSNARYWGSMSEGGGLSAAGGDTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCR 310
R R+GS R S AA + +++ L +N+ + L +F G I++
Sbjct: 107 RDRSGSRQRRRASPRRS---PAARSASPAKRVVIKNLSRNVLKTHLEEIFSIYGAIKNVD 163
Query: 311 VMKD-FKTGYSYGFGFVNFTREEDAARAIDTFNGYQL 418
+ D F G+G+V + EDA ++I +G Q+
Sbjct: 164 LPPDRFHNHVHRGYGYVEYDNLEDAEKSIKHMDGGQI 200
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 34.3 bits (75), Expect = 0.067
Identities = 21/74 (28%), Positives = 37/74 (50%)
Frame = +2
Query: 230 VNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIDTFNG 409
+ LP +++D+ F G + +MK+ GFGFV+F + DA A+ NG
Sbjct: 6 IGRLPNRASDRDVEHFFRGYGKLSDV-IMKN-------GFGFVDFQDQRDADDAVHDLNG 57
Query: 410 YQLRNKRLKVSYAR 451
+L +R+ + + R
Sbjct: 58 KELCGERVILEFPR 71
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 34.3 bits (75), Expect = 0.067
Identities = 21/78 (26%), Positives = 39/78 (50%)
Frame = +2
Query: 224 LIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIDTF 403
+ V+ +P + E+DL AMF G + S ++ + + S GFGFV E +A
Sbjct: 53 IYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRG--SKGFGFVTLDSIESCEKARAAL 110
Query: 404 NGYQLRNKRLKVSYARPS 457
+ ++ + ++V A P+
Sbjct: 111 HESHVQGRIIEVRRATPT 128
Score = 29.1 bits (62), Expect = 2.5
Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 473 ETNLYVTNLPRAITDDQLETIFGKYGRIVQKHIL-RDKNS 589
+ +YV+N+P + + L +F YGR++ I+ D+ S
Sbjct: 50 DNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGS 89
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 34.3 bits (75), Expect = 0.067
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +2
Query: 224 LIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAID 397
L + L + T++ L F GP+ V++D T +S GFGFV F A A++
Sbjct: 51 LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 108
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 482 LYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNS 589
L++ L TD+QL F ++G +V ++RD N+
Sbjct: 51 LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNT 86
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 34.3 bits (75), Expect = 0.067
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +2
Query: 224 LIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAID 397
L + L + T++ L F GP+ V++D T +S GFGFV F A A++
Sbjct: 71 LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 128
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 482 LYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNS 589
L++ L TD+QL F ++G +V ++RD N+
Sbjct: 71 LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNT 106
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 34.3 bits (75), Expect = 0.067
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +2
Query: 224 LIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAID 397
L + L + T++ L F GP+ V++D T +S GFGFV F A A++
Sbjct: 72 LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 129
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 482 LYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNS 589
L++ L TD+QL F ++G +V ++RD N+
Sbjct: 72 LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNT 107
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 34.3 bits (75), Expect = 0.067
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +2
Query: 218 TNLIVNYLPQNITEKDLYAMF--VTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARA 391
+N+ V + +++ + +LY F +T G ++ C V G+GFV F +A +
Sbjct: 96 SNVFVRGISRDMPDTELYQAFGGITDGVVQ-CHVAD--------GYGFVLFDTRANAQKK 146
Query: 392 IDTFNGYQLRNKRLKVSYARP 454
I +G L K + VS+ARP
Sbjct: 147 IVEMDGKTLNGKLISVSWARP 167
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 34.3 bits (75), Expect = 0.067
Identities = 21/78 (26%), Positives = 39/78 (50%)
Frame = +2
Query: 224 LIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIDTF 403
+ V+ +P + E+DL AMF G + S ++ + + S GFGFV E +A
Sbjct: 53 IYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRG--SKGFGFVTLDSIESCEKARAAL 110
Query: 404 NGYQLRNKRLKVSYARPS 457
+ ++ + ++V A P+
Sbjct: 111 HESHVQGRIIEVRRATPT 128
Score = 29.1 bits (62), Expect = 2.5
Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 473 ETNLYVTNLPRAITDDQLETIFGKYGRIVQKHIL-RDKNS 589
+ +YV+N+P + + L +F YGR++ I+ D+ S
Sbjct: 50 DNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGS 89
>Z81522-4|CAB04233.1| 771|Caenorhabditis elegans Hypothetical
protein F32B4.4a protein.
Length = 771
Score = 33.9 bits (74), Expect = 0.088
Identities = 11/42 (26%), Positives = 25/42 (59%)
Frame = +2
Query: 458 GDDIKETNLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDK 583
GDD+K+T++++ + A ++ + +YG+++Q I K
Sbjct: 88 GDDVKKTSIWIRGMTPATKASSVKQLASQYGKVIQSKIFNSK 129
>U55857-6|AAA98032.2| 206|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 2 protein.
Length = 206
Score = 33.9 bits (74), Expect = 0.088
Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 5/109 (4%)
Frame = +2
Query: 218 TNLIVNYLPQNIT----EKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAA 385
+ L +N L + I K L A+F G I S F+T G V F A+
Sbjct: 8 STLYINNLNEKIKIDELRKSLVAVFKQFGEIVSVMC---FRTLKMRGQAHVIFKELPAAS 64
Query: 386 RAIDTFNGYQLRNKRLKVSYARPSGDDI-KETNLYVTNLPRAITDDQLE 529
A + NG+ K +++ +AR D + +E Y+ P+ +++ L+
Sbjct: 65 AAREALNGFPFYEKPMRIQFAREDSDVVAQEKGTYIKREPKYLSEKILK 113
>U23486-7|AAC46775.1| 428|Caenorhabditis elegans Hypothetical
protein F07F6.1 protein.
Length = 428
Score = 33.9 bits (74), Expect = 0.088
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2
Query: 353 FVNFTREEDAARAIDTFNGYQLRNKRLKVSYARPSG 460
F+NF R EDA + + NGY R L V + P G
Sbjct: 130 FLNFYRPEDALKVMKHLNGYSYRGHILAVRFCYPDG 165
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 33.1 bits (72), Expect = 0.15
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +2
Query: 482 LYVTNLPRAITDDQLETIFGKYGRIVQ 562
LY+ NLP IT +++ IFGK+G + Q
Sbjct: 21 LYIKNLPYKITTEEMYEIFGKFGAVRQ 47
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 31.9 bits (69), Expect = 0.36
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +2
Query: 290 GPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIDTFNGYQLRNKRLKVSYARPSGDDI 469
G + S + +K G GFGF +FT E RA+ + + L +K+L V DD+
Sbjct: 71 GNVASWKRIKG-SNGKLQGFGFCHFTDLEGTLRALRILHEFHLGDKKLTVKPDEKVRDDL 129
Query: 470 KE 475
++
Sbjct: 130 RK 131
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 31.9 bits (69), Expect = 0.36
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +2
Query: 290 GPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIDTFNGYQLRNKRLKVSYARPSGDDI 469
G + S + +K G GFGF +FT E RA+ + + L +K+L V DD+
Sbjct: 71 GNVASWKRIKG-SNGKLQGFGFCHFTDLEGTLRALRILHEFHLGDKKLTVKPDEKVRDDL 129
Query: 470 KE 475
++
Sbjct: 130 RK 131
>U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical
protein C18A3.5c protein.
Length = 103
Score = 31.5 bits (68), Expect = 0.47
Identities = 19/65 (29%), Positives = 28/65 (43%)
Frame = +2
Query: 143 GSNARYWGSMSEGGGLSAAGGDTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKD 322
G NAR ++E G G L V L +TE + +F IG + +V+ D
Sbjct: 21 GYNARMHSKLAEREGFHLGNGSDEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD 80
Query: 323 FKTGY 337
+ GY
Sbjct: 81 -ELGY 84
Score = 31.1 bits (67), Expect = 0.62
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +2
Query: 455 SGDDIKETNLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDK 583
+G D T LYV NL +T+D + T+F + G + + ++ D+
Sbjct: 40 NGSDEPRT-LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDE 81
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 31.5 bits (68), Expect = 0.47
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +2
Query: 224 LIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARA 391
+ V LP + +E+DL + F G ++ D +T F F+ F EE A +A
Sbjct: 112 VFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 31.5 bits (68), Expect = 0.47
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +2
Query: 224 LIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARA 391
+ V LP + +E+DL + F G ++ D +T F F+ F EE A +A
Sbjct: 112 VFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 31.1 bits (67), Expect = 0.62
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 311 VMKDFKTGYSYGFGFVNFTREEDAARAIDTFNGYQLRNKRLKVSYAR 451
++ D +G GF +V F E+ AI NG N+ LKV+ A+
Sbjct: 43 LVHDRDSGSFKGFAYVTFENEQQMNTAISGLNGADFGNRVLKVNRAQ 89
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 30.7 bits (66), Expect = 0.82
Identities = 15/43 (34%), Positives = 29/43 (67%), Gaps = 4/43 (9%)
Frame = +2
Query: 452 PSGDDIKET-NLYVTNLPRAITDDQLETIFGKYG---RIVQKH 568
PS + +KE+ ++ ++ LP + DD+L+ F K+G R+V++H
Sbjct: 5 PSTNTVKESRHVAISGLPSTLPDDRLQLHFTKFGEIQRLVRQH 47
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 30.7 bits (66), Expect = 0.82
Identities = 15/43 (34%), Positives = 29/43 (67%), Gaps = 4/43 (9%)
Frame = +2
Query: 452 PSGDDIKET-NLYVTNLPRAITDDQLETIFGKYG---RIVQKH 568
PS + +KE+ ++ ++ LP + DD+L+ F K+G R+V++H
Sbjct: 5 PSTNTVKESRHVAISGLPSTLPDDRLQLHFTKFGEIQRLVRQH 47
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical
protein F07A11.6a protein.
Length = 2211
Score = 30.7 bits (66), Expect = 0.82
Identities = 15/43 (34%), Positives = 29/43 (67%), Gaps = 4/43 (9%)
Frame = +2
Query: 452 PSGDDIKET-NLYVTNLPRAITDDQLETIFGKYG---RIVQKH 568
PS + +KE+ ++ ++ LP + DD+L+ F K+G R+V++H
Sbjct: 5 PSTNTVKESRHVAISGLPSTLPDDRLQLHFTKFGEIQRLVRQH 47
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 30.7 bits (66), Expect = 0.82
Identities = 15/43 (34%), Positives = 29/43 (67%), Gaps = 4/43 (9%)
Frame = +2
Query: 452 PSGDDIKET-NLYVTNLPRAITDDQLETIFGKYG---RIVQKH 568
PS + +KE+ ++ ++ LP + DD+L+ F K+G R+V++H
Sbjct: 5 PSTNTVKESRHVAISGLPSTLPDDRLQLHFTKFGEIQRLVRQH 47
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 30.7 bits (66), Expect = 0.82
Identities = 15/43 (34%), Positives = 29/43 (67%), Gaps = 4/43 (9%)
Frame = +2
Query: 452 PSGDDIKET-NLYVTNLPRAITDDQLETIFGKYG---RIVQKH 568
PS + +KE+ ++ ++ LP + DD+L+ F K+G R+V++H
Sbjct: 5 PSTNTVKESRHVAISGLPSTLPDDRLQLHFTKFGEIQRLVRQH 47
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical
protein F07A11.6a protein.
Length = 2211
Score = 30.7 bits (66), Expect = 0.82
Identities = 15/43 (34%), Positives = 29/43 (67%), Gaps = 4/43 (9%)
Frame = +2
Query: 452 PSGDDIKET-NLYVTNLPRAITDDQLETIFGKYG---RIVQKH 568
PS + +KE+ ++ ++ LP + DD+L+ F K+G R+V++H
Sbjct: 5 PSTNTVKESRHVAISGLPSTLPDDRLQLHFTKFGEIQRLVRQH 47
>Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical
protein F32H2.5 protein.
Length = 2586
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 476 TNLYVTNLPRAITDDQLETIFGKYGRIVQ 562
TN+ + N P++ DD+LE+ G G+I Q
Sbjct: 793 TNVGLMNRPKSENDDELESFLGSLGKIYQ 821
>Z68004-3|CAA91983.2| 380|Caenorhabditis elegans Hypothetical
protein F47B10.3 protein.
Length = 380
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +3
Query: 36 IFYFI*KLCIFFYFPLNVTGTNYN--CCKSNSSTEAERVR 149
I FI L I PL +T T + CCKSN ++E E VR
Sbjct: 162 ILGFISMLLILVLAPLTITVTIFCAFCCKSNPTSEHEAVR 201
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 473 ETNLYVTNLPRAITDDQLETIFGKYGRIVQKHILR 577
+ +YV LP T +LE IF ++GRI + + R
Sbjct: 2 DAKVYVGGLPSDATSQELEEIFDRFGRIRKVWVAR 36
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 473 ETNLYVTNLPRAITDDQLETIFGKYGRIVQKHILR 577
+ +YV LP T +LE IF ++GRI + + R
Sbjct: 2 DAKVYVGGLPSDATSQELEEIFDRFGRIRKVWVAR 36
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 473 ETNLYVTNLPRAITDDQLETIFGKYGRIVQKHILR 577
+ +YV LP T +LE IF ++GRI + + R
Sbjct: 2 DAKVYVGGLPSDATSQELEEIFDRFGRIRKVWVAR 36
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 29.5 bits (63), Expect = 1.9
Identities = 28/129 (21%), Positives = 58/129 (44%), Gaps = 7/129 (5%)
Frame = +2
Query: 191 SAAGGDTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTR 370
+A G + ART + V+ L TE ++ + I R K GF +V
Sbjct: 585 AAPGTEDART-IFVSNLDFTTTEDEIRQAIEGVASIRFAR--KANSDLVHRGFAYVVMEN 641
Query: 371 EEDAARAIDTFNGYQLRNKRLKVSYARPS-------GDDIKETNLYVTNLPRAITDDQLE 529
++ A +A+ + ++ + + +S P ++++ ++V N+ TDD+L+
Sbjct: 642 DQKAQQAL-LKDRVPVKGRPMFISANDPEKRVGFKFSTTLEKSKVFVRNVHFQATDDELK 700
Query: 530 TIFGKYGRI 556
+F K+G +
Sbjct: 701 ALFSKFGTV 709
>U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform b protein.
Length = 166
Score = 29.5 bits (63), Expect = 1.9
Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +2
Query: 224 LIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIDTF 403
L + +P N E+D+ G I + + YGF FV+F DA A
Sbjct: 4 LYLGKIPYNARERDVERFLKGYGKINNISM--------KYGFAFVDFEDSRDAEDACHDL 55
Query: 404 NGYQLR--NKRLKVSYAR--PSGDD 466
+G + + RL V AR P G+D
Sbjct: 56 DGKTMEGSSMRLVVEMARGKPRGND 80
>U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform d protein.
Length = 208
Score = 29.5 bits (63), Expect = 1.9
Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +2
Query: 224 LIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIDTF 403
L + +P N E+D+ G I + + YGF FV+F DA A
Sbjct: 4 LYLGKIPYNARERDVERFLKGYGKINNISM--------KYGFAFVDFEDSRDAEDACHDL 55
Query: 404 NGYQLR--NKRLKVSYAR--PSGDD 466
+G + + RL V AR P G+D
Sbjct: 56 DGKTMEGSSMRLVVEMARGKPRGND 80
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 29.5 bits (63), Expect = 1.9
Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +2
Query: 224 LIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIDTF 403
L + +P N E+D+ G I + + YGF FV+F DA A
Sbjct: 4 LYLGKIPYNARERDVERFLKGYGKINNISM--------KYGFAFVDFEDSRDAEDACHDL 55
Query: 404 NGYQLR--NKRLKVSYAR--PSGDD 466
+G + + RL V AR P G+D
Sbjct: 56 DGKTMEGSSMRLVVEMARGKPRGND 80
>AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical
protein Y65B4A.1 protein.
Length = 442
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 482 LYVTNLPRAITDDQLETIFGKYGRIVQKHILRDK 583
+YV+NLP ITD++ + K G ++Q I +K
Sbjct: 181 VYVSNLPEDITDEEFQKFMSKCG-VIQPDIRTNK 213
>U23484-17|AAK68296.1| 367|Caenorhabditis elegans Tudor domain plus
rrm motif protein1 protein.
Length = 367
Score = 28.7 bits (61), Expect = 3.3
Identities = 10/42 (23%), Positives = 22/42 (52%)
Frame = +2
Query: 467 IKETNLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNSG 592
+K+ ++ N+P+A D L +F +G++ ++ N G
Sbjct: 10 LKDAGFHIRNIPKAWNDWNLFHVFQNFGKVSYCRVVGQSNDG 51
>AF303251-1|AAG50209.1| 367|Caenorhabditis elegans 2F713 protein.
Length = 367
Score = 28.7 bits (61), Expect = 3.3
Identities = 10/42 (23%), Positives = 22/42 (52%)
Frame = +2
Query: 467 IKETNLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNSG 592
+K+ ++ N+P+A D L +F +G++ ++ N G
Sbjct: 10 LKDAGFHIRNIPKAWNDWNLFHVFQNFGKVSYCRVVGQSNDG 51
>AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical
protein K07H8.10 protein.
Length = 798
Score = 28.7 bits (61), Expect = 3.3
Identities = 22/76 (28%), Positives = 32/76 (42%)
Frame = +2
Query: 224 LIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIDTF 403
L +N LP DL +F + I +++ S F+ F EDA A
Sbjct: 640 LFINALPGTCNNTDLKNIFRSSTDI---KILHASGQPNSKKRAFITFGTVEDAQAAFAKS 696
Query: 404 NGYQLRNKRLKVSYAR 451
NG ++ N + V YAR
Sbjct: 697 NGLKVNNHLVDVFYAR 712
>Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical
protein Y57G11A.5 protein.
Length = 121
Score = 28.3 bits (60), Expect = 4.4
Identities = 22/78 (28%), Positives = 33/78 (42%)
Frame = +2
Query: 272 AMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIDTFNGYQLRNKRLKVSYAR 451
A+F +GPI+S + K GF FV F R A A+ NG ++ + KV
Sbjct: 46 AVFSVMGPIKSIWMAKR-----PPGFAFVTFKRTVHAFDAVKYLNGKKICDLEAKVEMCE 100
Query: 452 PSGDDIKETNLYVTNLPR 505
+ + + NL R
Sbjct: 101 VDFKEDLRRRMELENLKR 118
>Z70687-1|CAA94616.3| 403|Caenorhabditis elegans Hypothetical
protein T14C1.1 protein.
Length = 403
Score = 28.3 bits (60), Expect = 4.4
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +2
Query: 176 EGGGLSAAGGDTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYS 340
E GG+S + L N + Q+I K +YA+F+ +GP+ + ++ G+S
Sbjct: 223 ELGGMSK---EVCPATLRYNEMYQSIYYKYMYAIFLAVGPLFTLIILNTLIIGFS 274
>U28732-4|AAB04900.1| 257|Caenorhabditis elegans Hypothetical
protein F45E1.3 protein.
Length = 257
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 8 SNFCHLFQLYFLFHLKAVYFFLFSIKCNWYK 100
+N +++ +F+F L AVY ++ C WYK
Sbjct: 5 TNLRNVWNSHFMFLLIAVYTLSSNLNCFWYK 35
>AF016684-16|AAB66213.1| 506|Caenorhabditis elegans Hypothetical
protein F45C12.16 protein.
Length = 506
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 5 HSNFCHLFQLYFLFHLKAVYF 67
HSNFC +Q F+F + VYF
Sbjct: 308 HSNFCVTYQEMFIFMTQDVYF 328
>Z77660-3|CAB01171.1| 471|Caenorhabditis elegans Hypothetical
protein F38H4.3 protein.
Length = 471
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +3
Query: 108 CCKSNSSTEAERVRTLDTGAACLKEGDSRPPAGTP 212
CC NS + V+ + +G+ ++GD+ PA P
Sbjct: 63 CCCCNSDLKEPPVQLIRSGSLTYQQGDTPKPASDP 97
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 27.5 bits (58), Expect = 7.7
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = +2
Query: 206 DTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAA 385
D RT + + LP+ +T +++ MF G + + D GY G V F R+
Sbjct: 316 DIHRT-VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFN 374
Query: 386 RAID 397
RA++
Sbjct: 375 RALE 378
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 27.5 bits (58), Expect = 7.7
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = +2
Query: 206 DTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAA 385
D RT + + LP+ +T +++ MF G + + D GY G V F R+
Sbjct: 316 DIHRT-VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFN 374
Query: 386 RAID 397
RA++
Sbjct: 375 RALE 378
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 27.5 bits (58), Expect = 7.7
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = +2
Query: 206 DTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAA 385
D RT + + LP+ +T +++ MF G + + D GY G V F R+
Sbjct: 102 DIHRT-VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFN 160
Query: 386 RAID 397
RA++
Sbjct: 161 RALE 164
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 27.5 bits (58), Expect = 7.7
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = +2
Query: 206 DTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAA 385
D RT + + LP+ +T +++ MF G + + D GY G V F R+
Sbjct: 316 DIHRT-VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFN 374
Query: 386 RAID 397
RA++
Sbjct: 375 RALE 378
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,126,249
Number of Sequences: 27780
Number of extensions: 270620
Number of successful extensions: 1085
Number of sequences better than 10.0: 119
Number of HSP's better than 10.0 without gapping: 931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1057
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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