Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9b19
         (626 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    27   0.097
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.8  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   6.4  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   6.4  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   6.4  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   8.4  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 27.5 bits (58), Expect = 0.097
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = -1

Query: 593 ALREPSHLSSASMVMA*AGQIASQSLQAMHLSSPEGYLRKACSPLNLGERGP 438
           AL  P   + A+ + A A   A+Q    + ++SP G+ R + SPL      P
Sbjct: 136 ALLPPQTAAMAAYLNAAAVAAAAQQSHRLMMTSPSGFNRASVSPLISSSSSP 187


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -2

Query: 175 GSHQDYEYPIC 143
           G H D+ YP+C
Sbjct: 751 GLHLDWNYPVC 761


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 196 GNSNWDGGSHQDYEYP 149
           GNSN+   +HQ+Y  P
Sbjct: 91  GNSNFPPINHQNYNEP 106


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 196 GNSNWDGGSHQDYEYP 149
           GNSN+   +HQ+Y  P
Sbjct: 91  GNSNFPPINHQNYNEP 106


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 196 GNSNWDGGSHQDYEYP 149
           GNSN+   +HQ+Y  P
Sbjct: 91  GNSNFPPINHQNYNEP 106


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 339 GPIKDVSHCRRWRLVVYVRILYIVFS 262
           GP+  V +C R  L  Y+R  +  F+
Sbjct: 527 GPLLVVEYCSRGDLQTYLRTAWDKFT 552


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,756
Number of Sequences: 336
Number of extensions: 3759
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)