Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9b19
(626 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0128 - 31879286-31879381,31879463-31879574,31879680-318797... 148 3e-36
05_03_0010 + 7344164-7344402,7344741-7344915,7345068-7345580 31 0.75
05_02_0015 - 5605403-5605574,5605653-5605840,5605934-5606539,560... 31 0.99
02_02_0464 - 10552347-10552466,10552683-10552928,10553866-105541... 30 1.7
06_01_1098 - 9017236-9018660 29 2.3
04_04_1254 + 32112471-32112593,32112645-32112665,32112882-321131... 29 2.3
02_04_0058 - 19329380-19330498,19330941-19330988,19331797-19332174 29 3.0
01_03_0199 - 13730219-13730681,13731039-13731232,13731280-13731516 29 3.0
09_02_0348 - 7616686-7616802,7616888-7617176,7617259-7617429,761... 29 4.0
09_02_0173 + 5323749-5324602,5324681-5324851,5324934-5325222,532... 29 4.0
04_03_0211 - 12694217-12694318,12695119-12695256,12695470-12695628 29 4.0
04_01_0490 - 6440176-6440448,6440785-6441074,6441156-6441304,644... 29 4.0
07_03_1549 - 27633229-27633340,27633418-27633509,27633601-276342... 28 5.3
05_04_0367 - 20672776-20673550,20674097-20674320,20674626-206748... 28 5.3
03_06_0338 + 33240111-33240860,33241248-33241536,33242494-33242621 28 5.3
03_05_0105 - 20861130-20861384,20861472-20862262,20862364-208626... 28 5.3
03_01_0265 + 2046918-2049102,2052385-2052452,2052542-2052652,205... 28 5.3
05_06_0202 - 26339467-26339494,26339579-26339624,26339742-263397... 28 7.0
04_03_0365 - 14950398-14950880,14950967-14951262,14951277-149514... 28 7.0
03_03_0278 - 16126803-16129049 28 7.0
03_03_0128 - 14677152-14677296,14677381-14677457,14679836-14680312 28 7.0
01_06_0448 + 29462920-29463052,29463220-29463349,29463608-294637... 28 7.0
11_06_0031 + 19425011-19425113,19425552-19425637,19425732-194258... 27 9.2
09_04_0105 - 14633097-14635529 27 9.2
02_03_0415 + 18805541-18805610,18805962-18806128,18806616-188066... 27 9.2
01_06_1682 - 39130696-39131705,39132355-39132583 27 9.2
01_06_0365 + 28767538-28767696,28768299-28768520,28768630-287688... 27 9.2
01_06_0249 + 27868897-27871599 27 9.2
>03_06_0128 -
31879286-31879381,31879463-31879574,31879680-31879747,
31880959-31881072,31881207-31881247,31881340-31881393,
31881785-31881866,31882063-31882116
Length = 206
Score = 148 bits (359), Expect = 3e-36
Identities = 66/69 (95%), Positives = 67/69 (97%)
Frame = +1
Query: 418 INYPFEKGPLSPRFRGEHALRRYPSGEERCIACKLCEAICPAQAITIEAEERCDGSRRAT 597
INYPFEKGPLSPRFRGEHALRRYP+GEERCIACKLCEAICPAQAITIEAEER DGSRR T
Sbjct: 78 INYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEAICPAQAITIEAEEREDGSRRTT 137
Query: 598 RYDIDMTKC 624
RYDIDMTKC
Sbjct: 138 RYDIDMTKC 146
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = +1
Query: 463 GEHALRRYPSGEERCIACKLCEAICPAQAI 552
G RY +CI C C+ CP AI
Sbjct: 132 GSRRTTRYDIDMTKCIYCGFCQEACPVDAI 161
>05_03_0010 + 7344164-7344402,7344741-7344915,7345068-7345580
Length = 308
Score = 31.1 bits (67), Expect = 0.75
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +1
Query: 166 GENRRPSSNFPPHPAQSCAQGPQRPPFYCCPRTKYDVQYTYINDQP 303
G R P++ HP S + P P + P T ++ QY Y QP
Sbjct: 174 GTPRAPTTMPSSHPGASSSTTPPPPHGFVDPNTFFNPQYAYFGMQP 219
>05_02_0015 -
5605403-5605574,5605653-5605840,5605934-5606539,
5606626-5607072,5607151-5607173,5607528-5607879
Length = 595
Score = 30.7 bits (66), Expect = 0.99
Identities = 17/49 (34%), Positives = 20/49 (40%)
Frame = +1
Query: 178 RPSSNFPPHPAQSCAQGPQRPPFYCCPRTKYDVQYTYINDQPPSTTMRD 324
RP++ HP + A P PP P YDVQ Y D T D
Sbjct: 366 RPTTAPGGHPPKRPASAPSAPPAQDRPAQSYDVQLQYDTDFREDRTEAD 414
>02_02_0464 -
10552347-10552466,10552683-10552928,10553866-10554135,
10554231-10554413,10554493-10554688,10554775-10555079,
10555515-10555604,10555689-10555806,10555991-10556088,
10556187-10556272,10557622-10557736
Length = 608
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1
Query: 496 EERCIACKLCEAICPAQAITI 558
EE CI C +C +CP AI I
Sbjct: 56 EELCIGCGICVKVCPFDAIQI 76
>06_01_1098 - 9017236-9018660
Length = 474
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/47 (34%), Positives = 19/47 (40%)
Frame = +1
Query: 163 PGENRRPSSNFPPHPAQSCAQGPQRPPFYCCPRTKYDVQYTYINDQP 303
PG R P + HP S + P PP P + QY Y QP
Sbjct: 337 PGAPRAPRTAPSSHPGASSSSAPP-PPHGYDPNVFFHPQYAYFGMQP 382
>04_04_1254 +
32112471-32112593,32112645-32112665,32112882-32113100,
32113354-32113554,32114419-32114578,32114988-32115225,
32115326-32115447,32115852-32115880
Length = 370
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -3
Query: 417 CCWLFEQMS*SYGKTSDYFCPKQSLRGPIKDVSHC 313
CCW + +S +T +F QS P+KD ++C
Sbjct: 26 CCWRRDMLSRRRSETPCFFHSVQSSVSPLKDSTNC 60
>02_04_0058 - 19329380-19330498,19330941-19330988,19331797-19332174
Length = 514
Score = 29.1 bits (62), Expect = 3.0
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 196 PPHPAQSCAQGPQRPPF 246
PP P ++ QGPQ PPF
Sbjct: 52 PPRPLEALLQGPQLPPF 68
>01_03_0199 - 13730219-13730681,13731039-13731232,13731280-13731516
Length = 297
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = +1
Query: 166 GENRRPSSNFPPHPAQSCAQGPQRPPFYCCPRTKYDVQYTYINDQP 303
G R P + HP S + P PP Y P + QY Y QP
Sbjct: 170 GAPRAPRAAPSSHPGASSSSAPPPPPGY-DPNAFFYPQYAYFGMQP 214
>09_02_0348 -
7616686-7616802,7616888-7617176,7617259-7617429,
7617508-7617680,7617789-7618394,7618482-7618793,
7619007-7619032,7619077-7619191
Length = 602
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/49 (32%), Positives = 19/49 (38%)
Frame = +1
Query: 178 RPSSNFPPHPAQSCAQGPQRPPFYCCPRTKYDVQYTYINDQPPSTTMRD 324
RP++ HP + A P P C YDVQ Y D T D
Sbjct: 243 RPTTAPGGHPPKRPASAPSAPAAQDCHAQSYDVQLQYDTDFGEDRTEAD 291
>09_02_0173 +
5323749-5324602,5324681-5324851,5324934-5325222,
5325452-5325490
Length = 450
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/49 (32%), Positives = 19/49 (38%)
Frame = +1
Query: 178 RPSSNFPPHPAQSCAQGPQRPPFYCCPRTKYDVQYTYINDQPPSTTMRD 324
RP++ P + A P PP C YDVQ Y D T D
Sbjct: 81 RPTTAPGGRPPKRPASAPSAPPAQDCHAQSYDVQLQYDTDFGEDRTEAD 129
>04_03_0211 - 12694217-12694318,12695119-12695256,12695470-12695628
Length = 132
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 178 RPSSNFPPHPA-QSCAQGPQRPPFYCCPRTKYDVQYTYINDQPPSTTMRD 324
R +S P PA +S Q P +P + PR+ V+ ++ND+ +T R+
Sbjct: 16 RHASCRPSQPALRSLNQDPPKPARHTGPRSHIAVRTCHVNDETSRSTCRN 65
>04_01_0490 -
6440176-6440448,6440785-6441074,6441156-6441304,
6441432-6441890,6441973-6442269,6442604-6443502,
6443793-6443827,6443984-6444078,6444184-6444247,
6446099-6446175,6446330-6446514
Length = 940
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = -3
Query: 384 YGKTSDYFCPKQSLRG---PIKDVSHCRRWRLVVYVRILY 274
+G T + FCP ++ P+K V H + L V++ I+Y
Sbjct: 130 FGSTEEMFCPAGTIADWVPPLKTVEHLVQGMLFVFLLIIY 169
>07_03_1549 -
27633229-27633340,27633418-27633509,27633601-27634270,
27634731-27634870,27634958-27635299
Length = 451
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Frame = -3
Query: 249 VKWGTLRSLRTRLCRVRGEIRTGTAV---LTRITNIRFVTKIRNNKKHV 112
+KW S+ T LC ++ E+R+ ++ +R IR + R+NK++V
Sbjct: 160 IKWTRTLSMSTALCELQLELRSSSSTENFQSRTPPIRECKRKRSNKRNV 208
>05_04_0367 -
20672776-20673550,20674097-20674320,20674626-20674843,
20675133-20676534
Length = 872
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -1
Query: 404 LNKCPKVTAKPRTISVQNKVCEARSKMSLIVVDGG 300
++ V AK +T S+++K CE S S V+D G
Sbjct: 333 IDNADAVNAKAKTASMEHKECEIESVGSASVLDSG 367
>03_06_0338 + 33240111-33240860,33241248-33241536,33242494-33242621
Length = 388
Score = 28.3 bits (60), Expect = 5.3
Identities = 16/57 (28%), Positives = 23/57 (40%)
Frame = +1
Query: 154 IRNPGENRRPSSNFPPHPAQSCAQGPQRPPFYCCPRTKYDVQYTYINDQPPSTTMRD 324
+ PG +R P+S PP PA + PP P + +Y PP +D
Sbjct: 152 VLTPGHDRAPTSAAPPSPAHAPELKKPPPP----PEAHHRPTKSYTGHPPPPPLEKD 204
>03_05_0105 -
20861130-20861384,20861472-20862262,20862364-20862618,
20862713-20862827,20862959-20863011,20863113-20863373,
20863699-20863749,20863863-20864114,20864504-20864726,
20865317-20865460
Length = 799
Score = 28.3 bits (60), Expect = 5.3
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +1
Query: 259 RTKYDVQYTYINDQPPSTT-MRDIFDRASQTLFWTEIVRGFAVTLGHLFKEPATIN 423
R KY++++T D+ D+ LF+TE+V+G HL ++ TI+
Sbjct: 531 RYKYELEHTVSTDKVKEMLESHDLKRVRGVALFYTELVQGIPPIFPHLIEKIPTIH 586
>03_01_0265 + 2046918-2049102,2052385-2052452,2052542-2052652,
2053164-2053250,2053476-2053684,2054115-2054340,
2054473-2054510,2054657-2054714,2055363-2055662,
2055832-2055903,2055988-2056112,2056240-2056312,
2056417-2056521
Length = 1218
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +1
Query: 142 HKSDIRNPGENRRPSSNFPPHPAQSCAQGPQRPP 243
H S R P RRP+ PP P ++ + R P
Sbjct: 1014 HASSTRTPRGPRRPAGAVPPTPRRAALRATTRSP 1047
>05_06_0202 -
26339467-26339494,26339579-26339624,26339742-26339785,
26340729-26340851,26341010-26341124,26341447-26342207,
26342305-26342711,26342798-26342900,26344642-26345144
Length = 709
Score = 27.9 bits (59), Expect = 7.0
Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 7/87 (8%)
Frame = +1
Query: 157 RNPGENRRPSSNFPPHPAQSCAQGPQRPPFYCCPRTKYDVQYTYINDQPPSTTMRDI--- 327
++ N +P FP + + PPFY + ++ + D PSTT R
Sbjct: 355 QHQASNSQPERGFPMKQSFASNLNSASPPFYPSRPSHQELPVSQRGDGQPSTTTRHFSSP 414
Query: 328 --FDRASQTLFWTEIVRG--FAVTLGH 396
+ S T + ++RG F + GH
Sbjct: 415 IGMEHVSPTPQYGPLLRGKAFVPSAGH 441
>04_03_0365 -
14950398-14950880,14950967-14951262,14951277-14951413,
14951562-14952039,14952203-14952215
Length = 468
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/49 (32%), Positives = 19/49 (38%)
Frame = +1
Query: 178 RPSSNFPPHPAQSCAQGPQRPPFYCCPRTKYDVQYTYINDQPPSTTMRD 324
RP++ P + A P PP C YDVQ Y D T D
Sbjct: 400 RPTTAPGGCPPKRPASAPSAPPAQDCHAQSYDVQLQYDTDFGEDRTKAD 448
>03_03_0278 - 16126803-16129049
Length = 748
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = +1
Query: 196 PPHPAQSCAQGPQRPPFY--CCPRTKYDVQY--TYINDQPPSTTMRDIF 330
PP P Q+ A P +PP + C + K + +Y Y+N T R+ F
Sbjct: 190 PPPPRQAPAPPPAKPPTFWTSCNKCKMNYEYLKVYLNHNLLCPTCREPF 238
>03_03_0128 - 14677152-14677296,14677381-14677457,14679836-14680312
Length = 232
Score = 27.9 bits (59), Expect = 7.0
Identities = 20/65 (30%), Positives = 27/65 (41%)
Frame = -2
Query: 322 LSLSSMAAGRLCTYIVHRI*YADSSKMGDAEVLAHKIVQGEGGNSNWDGGSHQDYEYPIC 143
LSLS AA R H +D K+G V + +V EGG S S P+
Sbjct: 21 LSLSPAAALRFDLQSGHTKCISDDIKVGAMAVGKYHVVVPEGGGSTSSSSSSSSSAQPLL 80
Query: 142 DENKK 128
E+ +
Sbjct: 81 PESHR 85
>01_06_0448 +
29462920-29463052,29463220-29463349,29463608-29463732,
29463923-29464458
Length = 307
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -1
Query: 542 AGQIASQSLQAMHLSSPEGYLRKACSPLNLGERG 441
AG + Q + HL +PEG + ++C P + ++G
Sbjct: 223 AGIVGGQCKPSDHLLAPEGVVARSCLPAFVEQKG 256
>11_06_0031 +
19425011-19425113,19425552-19425637,19425732-19425829,
19425950-19426067,19426200-19426289,19426770-19427074,
19427162-19427357,19427435-19427617,19427713-19427982,
19428906-19429151,19429633-19429704,19430087-19430104
Length = 594
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +1
Query: 496 EERCIACKLCEAICPAQAITI 558
EE CI C +C CP AI I
Sbjct: 52 EELCIGCGICVKKCPFDAIEI 72
>09_04_0105 - 14633097-14635529
Length = 810
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +1
Query: 241 PFYCCPRTKYDVQYTYINDQPPSTTMRDIFDRA 339
PFYC P Y ++ ++DQ S+++ ++ R+
Sbjct: 586 PFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRS 618
>02_03_0415 +
18805541-18805610,18805962-18806128,18806616-18806645,
18807459-18807515,18808268-18808337,18808915-18810998
Length = 825
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 121 FVISYFRHKSDIRNPGENRRPSSNFPP 201
+V+ Y+ H++ I G N RP +NF P
Sbjct: 428 YVVDYY-HQACIAKRGANSRPKANFAP 453
>01_06_1682 - 39130696-39131705,39132355-39132583
Length = 412
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +1
Query: 181 PSSNFPPHPAQSCAQGPQRPPFYCCPRTKYDVQYTYINDQPP 306
P S+ P P QS P PP+ P Y T N PP
Sbjct: 222 PPSHQYPSPPQSSYHSP--PPYQYTPPNSYQAPPTSYNHPPP 261
>01_06_0365 +
28767538-28767696,28768299-28768520,28768630-28768868,
28769499-28770024,28770115-28770388,28770495-28771134,
28771220-28771448,28771682-28771948,28772031-28772294,
28772700-28773344
Length = 1154
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -1
Query: 410 GSLNKCPKVTAKPRTISVQNKVCEARSKMSL-IVVDGGWSFMYVYCTSYL 264
GS+ A+ R I N+ C+A K S+ + GG F + Y YL
Sbjct: 778 GSIRTVASFCAEKRVIKTYNQKCQASMKESIRSGMVGGLGFSFSYLMVYL 827
>01_06_0249 + 27868897-27871599
Length = 900
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 214 IVQGEGGNSNWDGGSHQDYEYPICDENKK 128
I+ G +W+ SH Y Y + DE KK
Sbjct: 391 IISVSGIQEHWENISHVKYTYTVVDEAKK 419
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,666,731
Number of Sequences: 37544
Number of extensions: 401153
Number of successful extensions: 1328
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1326
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1525730988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -