Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9b17
         (677 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.    73   8e-15
AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.    73   8e-15
AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.    73   8e-15
AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.    73   8e-15
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    37   5e-04
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   5.1  
DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.        23   6.7  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    23   6.7  
AM182454-1|CAJ65692.1|  182|Anopheles gambiae globin 2 protein.        23   6.7  

>AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 72.9 bits (171), Expect = 8e-15
 Identities = 35/112 (31%), Positives = 57/112 (50%)
 Frame = +3

Query: 342 YFGVGREMLDVALNRIRSVTEDCDNIQGFIVFRXXXXXXXXXXXXXXLESISRDFGKLSK 521
           ++  G E++D  L+ +R   E+CD +QGF +                +  I  ++     
Sbjct: 1   HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60

Query: 522 IEYAIYPAPKISPIIVESYNAVLTSHACMNTEDVCFLFDNEALYDILARSLE 677
             Y++ P+PK+S  +VE YNA L+ H  +   D  +  DNEALYDI  R+L+
Sbjct: 61  NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLK 112


>AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 72.9 bits (171), Expect = 8e-15
 Identities = 35/112 (31%), Positives = 57/112 (50%)
 Frame = +3

Query: 342 YFGVGREMLDVALNRIRSVTEDCDNIQGFIVFRXXXXXXXXXXXXXXLESISRDFGKLSK 521
           ++  G E++D  L+ +R   E+CD +QGF +                +  I  ++     
Sbjct: 1   HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60

Query: 522 IEYAIYPAPKISPIIVESYNAVLTSHACMNTEDVCFLFDNEALYDILARSLE 677
             Y++ P+PK+S  +VE YNA L+ H  +   D  +  DNEALYDI  R+L+
Sbjct: 61  NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLK 112


>AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 72.9 bits (171), Expect = 8e-15
 Identities = 35/112 (31%), Positives = 57/112 (50%)
 Frame = +3

Query: 342 YFGVGREMLDVALNRIRSVTEDCDNIQGFIVFRXXXXXXXXXXXXXXLESISRDFGKLSK 521
           ++  G E++D  L+ +R   E+CD +QGF +                +  I  ++     
Sbjct: 1   HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60

Query: 522 IEYAIYPAPKISPIIVESYNAVLTSHACMNTEDVCFLFDNEALYDILARSLE 677
             Y++ P+PK+S  +VE YNA L+ H  +   D  +  DNEALYDI  R+L+
Sbjct: 61  NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLK 112


>AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 72.9 bits (171), Expect = 8e-15
 Identities = 35/112 (31%), Positives = 57/112 (50%)
 Frame = +3

Query: 342 YFGVGREMLDVALNRIRSVTEDCDNIQGFIVFRXXXXXXXXXXXXXXLESISRDFGKLSK 521
           ++  G E++D  L+ +R   E+CD +QGF +                +  I  ++     
Sbjct: 1   HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60

Query: 522 IEYAIYPAPKISPIIVESYNAVLTSHACMNTEDVCFLFDNEALYDILARSLE 677
             Y++ P+PK+S  +VE YNA L+ H  +   D  +  DNEALYDI  R+L+
Sbjct: 61  NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLK 112


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 37.1 bits (82), Expect = 5e-04
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = +3

Query: 36  MKEILHIHIGQAGVQAANACWE 101
           M+E + +H+GQAGVQ  N CW+
Sbjct: 1   MRECISVHVGQAGVQIGNPCWD 22


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 14/50 (28%), Positives = 22/50 (44%)
 Frame = -2

Query: 328 LLAASSLPVIREEEWKSCRYTPVLISSMGVGSKSIITTRGTNFPAPVSLK 179
           +L     P +  +  KSC  +PV   S  V     +  R +  P+PV L+
Sbjct: 332 ILGTLITPELWMKNCKSCSISPVSDRSESVSPVPSLPVRSSPEPSPVLLR 381


>DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.
          Length = 494

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 13/48 (27%), Positives = 25/48 (52%)
 Frame = -2

Query: 274 RYTPVLISSMGVGSKSIITTRGTNFPAPVSLKKCPQLLSLSGNARTPS 131
           RYTP++ ++  V  +    T GT  PAP +++  P     +  ++ P+
Sbjct: 34  RYTPMVRTAQRVALRHSFETDGT--PAPSTVRPRPPAPPTNAPSQLPA 79


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -2

Query: 487 SRSKAVKPEPVPPPNARNTIKP 422
           S+S+A +P P  PP A    KP
Sbjct: 649 SQSQASEPTPALPPRADRDSKP 670


>AM182454-1|CAJ65692.1|  182|Anopheles gambiae globin 2 protein.
          Length = 182

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
 Frame = +1

Query: 400 QKIVIIFRALL-YFERLEGEQVLVSQL-YFWKVFHAILGNCP 519
           + I+ I   LL Y E+  G Q+  S    FWK+F  I G  P
Sbjct: 108 EDILTIGEVLLNYLEQALGRQMSDSLPDAFWKLFQTIAGRFP 149


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 733,916
Number of Sequences: 2352
Number of extensions: 15860
Number of successful extensions: 44
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)