Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9b15
         (561 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118959-1|AAM50819.1|   84|Drosophila melanogaster LD37859p pro...   161   4e-40
AE014297-3747|AAF56428.1|   84|Drosophila melanogaster CG10423-P...   161   4e-40
Y09103-1|CAA70321.1| 1644|Drosophila melanogaster largest subuni...    30   1.9  
AY121632-1|AAM51959.1|  542|Drosophila melanogaster GM01935p pro...    30   1.9  
AE013599-1910|AAF58234.1| 1642|Drosophila melanogaster CG10122-P...    30   1.9  
AY113459-1|AAM29464.1|  361|Drosophila melanogaster RE36989p pro...    29   3.3  
AE014134-864|AAF52211.2|  388|Drosophila melanogaster CG14040-PA...    29   3.3  

>AY118959-1|AAM50819.1|   84|Drosophila melanogaster LD37859p
           protein.
          Length = 84

 Score =  161 bits (392), Expect = 4e-40
 Identities = 71/80 (88%), Positives = 75/80 (93%)
 Frame = +3

Query: 174 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 353
           LA DLLHP PA E+RKHKLKRLV HPNSYFMDVKCPGCY+ITTVFSHAQ VVVCAGC+TI
Sbjct: 3   LAKDLLHPLPAEEKRKHKLKRLVQHPNSYFMDVKCPGCYRITTVFSHAQGVVVCAGCATI 62

Query: 354 LCQPTGGRARLTEGCSFRRK 413
           LCQPTGGRA+LTEGCSFRRK
Sbjct: 63  LCQPTGGRAKLTEGCSFRRK 82


>AE014297-3747|AAF56428.1|   84|Drosophila melanogaster CG10423-PA
           protein.
          Length = 84

 Score =  161 bits (392), Expect = 4e-40
 Identities = 71/80 (88%), Positives = 75/80 (93%)
 Frame = +3

Query: 174 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 353
           LA DLLHP PA E+RKHKLKRLV HPNSYFMDVKCPGCY+ITTVFSHAQ VVVCAGC+TI
Sbjct: 3   LAKDLLHPLPAEEKRKHKLKRLVQHPNSYFMDVKCPGCYRITTVFSHAQGVVVCAGCATI 62

Query: 354 LCQPTGGRARLTEGCSFRRK 413
           LCQPTGGRA+LTEGCSFRRK
Sbjct: 63  LCQPTGGRAKLTEGCSFRRK 82


>Y09103-1|CAA70321.1| 1644|Drosophila melanogaster largest subunit of
            RNA polymeraseI (A) protein.
          Length = 1644

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 13/38 (34%), Positives = 26/38 (68%)
 Frame = -2

Query: 191  QQINCERIYLNLHSIPLSNLYYCINISTRISLKNQ*SH 78
            QQ   E++ +NL+S+ L+NL   +++ST ++L  + S+
Sbjct: 1240 QQHQAEKLRINLNSVTLANLLEYVHVSTGLTLDPERSY 1277


>AY121632-1|AAM51959.1|  542|Drosophila melanogaster GM01935p
           protein.
          Length = 542

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 13/38 (34%), Positives = 26/38 (68%)
 Frame = -2

Query: 191 QQINCERIYLNLHSIPLSNLYYCINISTRISLKNQ*SH 78
           QQ   E++ +NL+S+ L+NL   +++ST ++L  + S+
Sbjct: 139 QQHQAEKLRINLNSVTLANLLEYVHVSTGLTLDPERSY 176


>AE013599-1910|AAF58234.1| 1642|Drosophila melanogaster CG10122-PA
            protein.
          Length = 1642

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 13/38 (34%), Positives = 26/38 (68%)
 Frame = -2

Query: 191  QQINCERIYLNLHSIPLSNLYYCINISTRISLKNQ*SH 78
            QQ   E++ +NL+S+ L+NL   +++ST ++L  + S+
Sbjct: 1239 QQHQAEKLRINLNSVTLANLLEYVHVSTGLTLDPERSY 1276


>AY113459-1|AAM29464.1|  361|Drosophila melanogaster RE36989p
           protein.
          Length = 361

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +2

Query: 446 YLILRFFFQLYNGVIFFKFTTMDPSEHY 529
           Y++  F + LYN + F    T DP+ +Y
Sbjct: 88  YMVPAFLYCLYNNLAFVNLATFDPTTYY 115


>AE014134-864|AAF52211.2|  388|Drosophila melanogaster CG14040-PA
           protein.
          Length = 388

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +2

Query: 446 YLILRFFFQLYNGVIFFKFTTMDPSEHY 529
           Y++  F + LYN + F    T DP+ +Y
Sbjct: 88  YMVPAFLYCLYNNLAFVNLATFDPTTYY 115


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,969,548
Number of Sequences: 53049
Number of extensions: 459612
Number of successful extensions: 921
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 921
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2172596895
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)