Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9b10
(691 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 23 1.8
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 22 4.1
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 22 4.1
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 22 4.1
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 22 4.1
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 22 4.1
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 5.4
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 5.4
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 5.4
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 5.4
EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock prote... 21 9.5
EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D pro... 21 9.5
AM292352-1|CAL23164.1| 250|Tribolium castaneum gustatory recept... 21 9.5
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 23.4 bits (48), Expect = 1.8
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = -1
Query: 556 NSCISGVTI*NFQHLDIPAFHCIANNGY 473
N +SG++I + D F C+A N +
Sbjct: 854 NGVLSGLSIKRTERSDSALFTCVATNAF 881
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 22.2 bits (45), Expect = 4.1
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +2
Query: 629 ARSFNTLPDYITNKDWFFV 685
+ S L D+ITN +W+ +
Sbjct: 162 SESGGDLSDFITNGEWYLI 180
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 22.2 bits (45), Expect = 4.1
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +2
Query: 629 ARSFNTLPDYITNKDWFFV 685
+ S L D+ITN +W+ +
Sbjct: 162 SESGGDLSDFITNGEWYLI 180
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 22.2 bits (45), Expect = 4.1
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +2
Query: 629 ARSFNTLPDYITNKDWFFV 685
+ S L D+ITN +W+ +
Sbjct: 162 SESGGDLSDFITNGEWYLI 180
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 22.2 bits (45), Expect = 4.1
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +2
Query: 629 ARSFNTLPDYITNKDWFFV 685
+ S L D+ITN +W+ +
Sbjct: 162 SESGGDLSDFITNGEWYLI 180
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 22.2 bits (45), Expect = 4.1
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +2
Query: 629 ARSFNTLPDYITNKDWFFV 685
+ S L D+ITN +W+ +
Sbjct: 162 SESGGDLSDFITNGEWYLI 180
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 5.4
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -2
Query: 492 VLPITVTVQIDGYWRSNASRKS*ITF 415
++PI + + G+W + SR S I F
Sbjct: 255 IIPIAIFLVSLGWWENYISRHSPIPF 280
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 5.4
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -2
Query: 492 VLPITVTVQIDGYWRSNASRKS*ITF 415
++PI + + G+W + SR S I F
Sbjct: 255 IIPIAIFLVSLGWWENYISRHSPIPF 280
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.8 bits (44), Expect = 5.4
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -2
Query: 492 VLPITVTVQIDGYWRSNASRKS*ITF 415
++PI + + G+W + SR S I F
Sbjct: 255 IIPIAIFLVSLGWWENYISRHSPIPF 280
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.8 bits (44), Expect = 5.4
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -2
Query: 492 VLPITVTVQIDGYWRSNASRKS*ITF 415
++PI + + G+W + SR S I F
Sbjct: 255 IIPIAIFLVSLGWWENYISRHSPIPF 280
>EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock protein
90 protein.
Length = 721
Score = 21.0 bits (42), Expect = 9.5
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
Frame = -1
Query: 655 IR*RIKTSSDMIGYVRYD*RTDP--LSS---VYCPVQPNSCISGVTI 530
+R I SSD + +RY+ T+P L S +Y + PN +TI
Sbjct: 38 LRELISNSSDALDKIRYESLTNPSRLDSGKELYIKIIPNKNDGTLTI 84
>EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D
protein.
Length = 255
Score = 21.0 bits (42), Expect = 9.5
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +1
Query: 454 IPVDLHGNRYWQYSG 498
+P+ NRYWQ G
Sbjct: 164 VPLGKSCNRYWQCQG 178
>AM292352-1|CAL23164.1| 250|Tribolium castaneum gustatory receptor
candidate 31 protein.
Length = 250
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 509 VKMLKISNSNARNTAVW 559
V+MLK N+ +NTA+W
Sbjct: 127 VEMLK--NARVKNTALW 141
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,794
Number of Sequences: 336
Number of extensions: 3815
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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