SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9b10
         (691 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024751-13|AAK21512.2|  488|Caenorhabditis elegans Hypothetical...    71   6e-13
Z75714-6|CAE54930.1|  532|Caenorhabditis elegans Hypothetical pr...    64   9e-11
Z75714-5|CAB00065.2|  581|Caenorhabditis elegans Hypothetical pr...    64   9e-11
Z83122-4|CAB05602.2|  664|Caenorhabditis elegans Hypothetical pr...    64   1e-10
Z78413-12|CAB01666.3|  448|Caenorhabditis elegans Hypothetical p...    62   3e-10
Z78411-5|CAB01647.3|  448|Caenorhabditis elegans Hypothetical pr...    62   3e-10
AC024791-18|AAT81180.1|  438|Caenorhabditis elegans Hypothetical...    56   3e-08
AC024791-16|AAF60674.3|  468|Caenorhabditis elegans Hypothetical...    56   3e-08
AC024791-15|ABQ13056.1|  464|Caenorhabditis elegans Hypothetical...    56   3e-08
AF098994-5|AAC67473.3|  579|Caenorhabditis elegans Hypothetical ...    54   7e-08
AF098994-4|AAO21390.1|  606|Caenorhabditis elegans Hypothetical ...    54   7e-08
AF098994-3|AAT81188.1|  455|Caenorhabditis elegans Hypothetical ...    52   3e-07
AF098994-2|AAT81187.1|  505|Caenorhabditis elegans Hypothetical ...    52   3e-07
Z71267-9|CAA95852.2|  380|Caenorhabditis elegans Hypothetical pr...    50   1e-06
Z71262-14|CAN99672.1|  380|Caenorhabditis elegans Hypothetical p...    50   1e-06
AF099003-2|AAC68743.2|  454|Caenorhabditis elegans Hypothetical ...    46   3e-05
U80448-8|AAB37821.3| 1014|Caenorhabditis elegans Hypothetical pr...    33   0.19 
U80028-9|AAN73867.1|  372|Caenorhabditis elegans Serpentine rece...    31   1.0  
Z81054-7|CAB02881.1|  472|Caenorhabditis elegans Hypothetical pr...    30   1.8  
AL033514-32|CAA22112.1|  344|Caenorhabditis elegans Hypothetical...    28   5.5  
Z81575-5|CAB04631.2|  353|Caenorhabditis elegans Hypothetical pr...    28   7.2  

>AC024751-13|AAK21512.2|  488|Caenorhabditis elegans Hypothetical
           protein Y18H1A.9 protein.
          Length = 488

 Score = 71.3 bits (167), Expect = 6e-13
 Identities = 31/95 (32%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
 Frame = +2

Query: 422 IYDFLDALERQYPSICTVTVIGNTVEGRDVKMLKISNSNARNT--AVWLDGTIHAREWIS 595
           + ++L++L   YP + +V  IG T EGR + ++KI+N     T   +W+DG IHAREW+S
Sbjct: 131 VINYLNSLAITYPELVSVQPIGTTHEGRQIPLIKITNKRNGGTKRGIWVDGGIHAREWVS 190

Query: 596 TSVVTYIADHIARSFN---TLPDYITNKDWFFVPV 691
            S V Y    +   ++    +  ++   +W+ VP+
Sbjct: 191 PSTVLYFIHQLVTQYDKDVQIKQFVDQLEWYIVPL 225


>Z75714-6|CAE54930.1|  532|Caenorhabditis elegans Hypothetical
           protein ZC434.9b protein.
          Length = 532

 Score = 64.1 bits (149), Expect = 9e-11
 Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 8/156 (5%)
 Frame = +2

Query: 200 KERHSAMDVIVEGTRTMQVEKLLRERDISFDVVTNDITXXXXXXXXXXXXXXXXXXXXXI 379
           K  H A D++V+  R   ++ +L+  +IS+DV+  D+                      +
Sbjct: 68  KVGHRA-DIMVDEDRMEWLDSVLKNSNISYDVIIEDVGKLILEKEHGPPRFSNLLFSKRM 126

Query: 380 ------KKSLDWKDFYPLNVIYDFLDALERQYPSICTVTVIGNTVEGRDVKMLKISNSNA 541
                 +    + +++    I D++  +ER+YP    V  +G T EGR ++ +KI +   
Sbjct: 127 HNEGGNRARYGFGEYHSYQTICDWMKDIERKYPDKAKVFTMGTTSEGRPIQGIKIGSQVW 186

Query: 542 RN--TAVWLDGTIHAREWISTSVVTYIADHIARSFN 643
           RN     W+DG IHAREW +     +  D +   +N
Sbjct: 187 RNDKRIFWIDGGIHAREWAAVHTALWFIDRLIADYN 222


>Z75714-5|CAB00065.2|  581|Caenorhabditis elegans Hypothetical
           protein ZC434.9a protein.
          Length = 581

 Score = 64.1 bits (149), Expect = 9e-11
 Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 8/156 (5%)
 Frame = +2

Query: 200 KERHSAMDVIVEGTRTMQVEKLLRERDISFDVVTNDITXXXXXXXXXXXXXXXXXXXXXI 379
           K  H A D++V+  R   ++ +L+  +IS+DV+  D+                      +
Sbjct: 68  KVGHRA-DIMVDEDRMEWLDSVLKNSNISYDVIIEDVGKLILEKEHGPPRFSNLLFSKRM 126

Query: 380 ------KKSLDWKDFYPLNVIYDFLDALERQYPSICTVTVIGNTVEGRDVKMLKISNSNA 541
                 +    + +++    I D++  +ER+YP    V  +G T EGR ++ +KI +   
Sbjct: 127 HNEGGNRARYGFGEYHSYQTICDWMKDIERKYPDKAKVFTMGTTSEGRPIQGIKIGSQVW 186

Query: 542 RN--TAVWLDGTIHAREWISTSVVTYIADHIARSFN 643
           RN     W+DG IHAREW +     +  D +   +N
Sbjct: 187 RNDKRIFWIDGGIHAREWAAVHTALWFIDRLIADYN 222


>Z83122-4|CAB05602.2|  664|Caenorhabditis elegans Hypothetical
           protein R11A5.7 protein.
          Length = 664

 Score = 63.7 bits (148), Expect = 1e-10
 Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
 Frame = +2

Query: 431 FLDALERQYPSICTVTVIGNTVEGRDVKMLKI-SNSNARNTAVWLDGTIHAREWISTSVV 607
           ++  +E  YP I  +  IG T EG+ ++ LKI + S+ +  AVW+DG IHAREW S+   
Sbjct: 170 YMRTIEFYYPRIAKIVRIGATHEGKPIEGLKIGARSSHKKRAVWVDGNIHAREWASSHTA 229

Query: 608 TYIADHIARSFN---TLPDYITNKDWFFVP 688
            Y  + +   +     + +Y+   D++ VP
Sbjct: 230 LYFINQLVSEYGKDAQITNYVDTLDFYIVP 259


>Z78413-12|CAB01666.3|  448|Caenorhabditis elegans Hypothetical
           protein F02D8.4 protein.
          Length = 448

 Score = 62.5 bits (145), Expect = 3e-10
 Identities = 26/62 (41%), Positives = 41/62 (66%)
 Frame = +2

Query: 431 FLDALERQYPSICTVTVIGNTVEGRDVKMLKISNSNARNTAVWLDGTIHAREWISTSVVT 610
           FL++L +QYP+   +  IGN+ EGR +  ++I++  +    VW+D  IHAREWIS +V  
Sbjct: 128 FLNSLAQQYPNDVKLQNIGNSYEGRSITAVRIADDGSSKPIVWIDAGIHAREWISYNVAL 187

Query: 611 YI 616
           Y+
Sbjct: 188 YL 189


>Z78411-5|CAB01647.3|  448|Caenorhabditis elegans Hypothetical
           protein F02D8.4 protein.
          Length = 448

 Score = 62.5 bits (145), Expect = 3e-10
 Identities = 26/62 (41%), Positives = 41/62 (66%)
 Frame = +2

Query: 431 FLDALERQYPSICTVTVIGNTVEGRDVKMLKISNSNARNTAVWLDGTIHAREWISTSVVT 610
           FL++L +QYP+   +  IGN+ EGR +  ++I++  +    VW+D  IHAREWIS +V  
Sbjct: 128 FLNSLAQQYPNDVKLQNIGNSYEGRSITAVRIADDGSSKPIVWIDAGIHAREWISYNVAL 187

Query: 611 YI 616
           Y+
Sbjct: 188 YL 189


>AC024791-18|AAT81180.1|  438|Caenorhabditis elegans Hypothetical
           protein Y47G6A.19b protein.
          Length = 438

 Score = 55.6 bits (128), Expect = 3e-08
 Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
 Frame = +2

Query: 401 DFYPLNVIYDFLDALERQYPSICTVTVIGNTVEGRDVKMLKISNSNARNTAVWLDGTIHA 580
           ++Y  +V+  +L+ +    P I  +  +G T+EGRD+  LK          V +D  IHA
Sbjct: 95  EYYSYSVLSTWLERIAENMPDIAKLIKVGTTIEGRDILGLKFGKDTPDKKIVVIDAGIHA 154

Query: 581 REWISTSVVTYIADHIARSFNTLP---DYITNKDWFFVPV 691
           REW +    +Y  + I       P   +Y+ N   + +PV
Sbjct: 155 REWAAIHTASYFINLIVNGREEDPQIQNYLDNIVLYIIPV 194


>AC024791-16|AAF60674.3|  468|Caenorhabditis elegans Hypothetical
           protein Y47G6A.19a protein.
          Length = 468

 Score = 55.6 bits (128), Expect = 3e-08
 Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
 Frame = +2

Query: 401 DFYPLNVIYDFLDALERQYPSICTVTVIGNTVEGRDVKMLKISNSNARNTAVWLDGTIHA 580
           ++Y  +V+  +L+ +    P I  +  +G T+EGRD+  LK          V +D  IHA
Sbjct: 95  EYYSYSVLSTWLERIAENMPDIAKLIKVGTTIEGRDILGLKFGKDTPDKKIVVIDAGIHA 154

Query: 581 REWISTSVVTYIADHIARSFNTLP---DYITNKDWFFVPV 691
           REW +    +Y  + I       P   +Y+ N   + +PV
Sbjct: 155 REWAAIHTASYFINLIVNGREEDPQIQNYLDNIVLYIIPV 194


>AC024791-15|ABQ13056.1|  464|Caenorhabditis elegans Hypothetical
           protein Y47G6A.19c protein.
          Length = 464

 Score = 55.6 bits (128), Expect = 3e-08
 Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
 Frame = +2

Query: 401 DFYPLNVIYDFLDALERQYPSICTVTVIGNTVEGRDVKMLKISNSNARNTAVWLDGTIHA 580
           ++Y  +V+  +L+ +    P I  +  +G T+EGRD+  LK          V +D  IHA
Sbjct: 95  EYYSYSVLSTWLERIAENMPDIAKLIKVGTTIEGRDILGLKFGKDTPDKKIVVIDAGIHA 154

Query: 581 REWISTSVVTYIADHIARSFNTLP---DYITNKDWFFVPV 691
           REW +    +Y  + I       P   +Y+ N   + +PV
Sbjct: 155 REWAAIHTASYFINLIVNGREEDPQIQNYLDNIVLYIIPV 194


>AF098994-5|AAC67473.3|  579|Caenorhabditis elegans Hypothetical
           protein T06A4.1a protein.
          Length = 579

 Score = 54.4 bits (125), Expect = 7e-08
 Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
 Frame = +2

Query: 413 LNVIYDFLDALERQYPSICTVTVIGNTVEGRDVKMLKIS---NSNARNTAVWLDGTIHAR 583
           L  I   +  L+++YP++ T+  IG + E R + ++KI+   N      ++W+D  IHAR
Sbjct: 131 LEEIQTEMKRLKKEYPTMITLIDIGQSHENRTLLVMKITGKRNPLGSKISMWIDAGIHAR 190

Query: 584 EWISTSVVTYIADHIARSFN---TLPDYITNKDWFFVPV 691
           EWI+ +   YIA  +   +    T+   + + D++ +PV
Sbjct: 191 EWIAPATAMYIAHELLLGYENDATVAKLMDHIDFYILPV 229


>AF098994-4|AAO21390.1|  606|Caenorhabditis elegans Hypothetical
           protein T06A4.1b protein.
          Length = 606

 Score = 54.4 bits (125), Expect = 7e-08
 Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
 Frame = +2

Query: 413 LNVIYDFLDALERQYPSICTVTVIGNTVEGRDVKMLKIS---NSNARNTAVWLDGTIHAR 583
           L  I   +  L+++YP++ T+  IG + E R + ++KI+   N      ++W+D  IHAR
Sbjct: 131 LEEIQTEMKRLKKEYPTMITLIDIGQSHENRTLLVMKITGKRNPLGSKISMWIDAGIHAR 190

Query: 584 EWISTSVVTYIADHIARSFN---TLPDYITNKDWFFVPV 691
           EWI+ +   YIA  +   +    T+   + + D++ +PV
Sbjct: 191 EWIAPATAMYIAHELLLGYENDATVAKLMDHIDFYILPV 229


>AF098994-3|AAT81188.1|  455|Caenorhabditis elegans Hypothetical
           protein T06A4.3b protein.
          Length = 455

 Score = 52.4 bits (120), Expect = 3e-07
 Identities = 33/150 (22%), Positives = 58/150 (38%), Gaps = 2/150 (1%)
 Frame = +2

Query: 200 KERHSAMDVIVEGTRTMQVEKLLRERDISFDVVTNDITXXXXXXXXXXXXXXXXXXXXXI 379
           K++H   DV+V+   +      L+  DIS+    +D+                       
Sbjct: 58  KDKHGFWDVMVDMKNSKYFLDFLQVNDISYIKTIDDVEGLITKHENNKTLSNMFPRLWDD 117

Query: 380 KKSL--DWKDFYPLNVIYDFLDALERQYPSICTVTVIGNTVEGRDVKMLKISNSNARNTA 553
             S   D+  +     + D++  L  +YP +     IG T EGR++  ++I   +     
Sbjct: 118 SSSAHYDFHTYGSYQRMTDWMKQLVVKYPKMVQYISIGKTTEGRNIDGVEIGGDSRTKKI 177

Query: 554 VWLDGTIHAREWISTSVVTYIADHIARSFN 643
            W+DG IHAREW +     +    +    N
Sbjct: 178 FWIDGGIHAREWAAPHTALFFIHQLTSRAN 207


>AF098994-2|AAT81187.1|  505|Caenorhabditis elegans Hypothetical
           protein T06A4.3a protein.
          Length = 505

 Score = 52.4 bits (120), Expect = 3e-07
 Identities = 33/150 (22%), Positives = 58/150 (38%), Gaps = 2/150 (1%)
 Frame = +2

Query: 200 KERHSAMDVIVEGTRTMQVEKLLRERDISFDVVTNDITXXXXXXXXXXXXXXXXXXXXXI 379
           K++H   DV+V+   +      L+  DIS+    +D+                       
Sbjct: 58  KDKHGFWDVMVDMKNSKYFLDFLQVNDISYIKTIDDVEGLITKHENNKTLSNMFPRLWDD 117

Query: 380 KKSL--DWKDFYPLNVIYDFLDALERQYPSICTVTVIGNTVEGRDVKMLKISNSNARNTA 553
             S   D+  +     + D++  L  +YP +     IG T EGR++  ++I   +     
Sbjct: 118 SSSAHYDFHTYGSYQRMTDWMKQLVVKYPKMVQYISIGKTTEGRNIDGVEIGGDSRTKKI 177

Query: 554 VWLDGTIHAREWISTSVVTYIADHIARSFN 643
            W+DG IHAREW +     +    +    N
Sbjct: 178 FWIDGGIHAREWAAPHTALFFIHQLTSRAN 207


>Z71267-9|CAA95852.2|  380|Caenorhabditis elegans Hypothetical
           protein W01A8.6 protein.
          Length = 380

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
 Frame = +2

Query: 428 DFLDALERQYPSICTVTVIGNTVEGRDVKMLKISNS---NARNTAVWLDGTIHAREWIST 598
           D++  +    PS   +  IG T EGR +  ++I        R  AVWLDG  HAREW + 
Sbjct: 43  DYIKGVAHDNPSFVQLKTIGRTREGRPLLGVRIGKPALPGKRKIAVWLDGGNHAREWPAF 102

Query: 599 SVVTYIADHIARSF---NTLPDYITNKDWFFVPV 691
            V  Y  + +   +   + +  Y+   D +  PV
Sbjct: 103 HVAVYFIEKLVNGYLSDDKITKYVETLDIYVFPV 136


>Z71262-14|CAN99672.1|  380|Caenorhabditis elegans Hypothetical
           protein W01A8.6 protein.
          Length = 380

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
 Frame = +2

Query: 428 DFLDALERQYPSICTVTVIGNTVEGRDVKMLKISNS---NARNTAVWLDGTIHAREWIST 598
           D++  +    PS   +  IG T EGR +  ++I        R  AVWLDG  HAREW + 
Sbjct: 43  DYIKGVAHDNPSFVQLKTIGRTREGRPLLGVRIGKPALPGKRKIAVWLDGGNHAREWPAF 102

Query: 599 SVVTYIADHIARSF---NTLPDYITNKDWFFVPV 691
            V  Y  + +   +   + +  Y+   D +  PV
Sbjct: 103 HVAVYFIEKLVNGYLSDDKITKYVETLDIYVFPV 136


>AF099003-2|AAC68743.2|  454|Caenorhabditis elegans Hypothetical
           protein Y59C2A.1 protein.
          Length = 454

 Score = 45.6 bits (103), Expect = 3e-05
 Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 6/108 (5%)
 Frame = +2

Query: 383 KSLDWKDFYPLNVIYDFLDALERQYPSICTVTVIGNTVEGRDVKMLKI---SNSNARNTA 553
           +  D   ++  N + +F+  L  Q   +  +  +  + EGR +  +KI     S     +
Sbjct: 140 QEFDTNAYHSYNEMVEFMKLLSEQKSDMVEMVKVATSSEGRSIYGVKIHPPGPSPPEKPS 199

Query: 554 VWLDGTIHAREWISTSVVTYIADHIARSFNTLPDYITNK---DWFFVP 688
           + +D  +HAREWI+ +V  ++   I   +   P    N    DW+ +P
Sbjct: 200 IIVDAGVHAREWIAPAVGLFMIRKIVEEYGRNPQVTANLQKFDWYIMP 247


>U80448-8|AAB37821.3| 1014|Caenorhabditis elegans Hypothetical
           protein F59A3.1 protein.
          Length = 1014

 Score = 33.1 bits (72), Expect = 0.19
 Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 7/98 (7%)
 Frame = +2

Query: 416 NVIYDFLDALERQYPSICTVTVIGNTVEGRDVKMLKISNS----NARNTAVWLDGTIHAR 583
           N +  +L A    YP+I  +   G +VEGR++ +L IS+           + + G +H  
Sbjct: 82  NEMTAWLKATRLNYPNITHLYSAGKSVEGRELWVLIISDKPKEHKLMEPELKIVGNMHGN 141

Query: 584 EWISTSVVTYIADHIARSFNT---LPDYITNKDWFFVP 688
           E +    V Y+A+ +  ++     L D + N     +P
Sbjct: 142 EVVGREAVLYLAEILCLNYGKNKYLTDLVNNARIHLMP 179


>U80028-9|AAN73867.1|  372|Caenorhabditis elegans Serpentine
           receptor, class w protein117 protein.
          Length = 372

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 15/59 (25%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = -2

Query: 546 FLALLFEIFNILTS--LPSTVLPITVTVQIDGYWRSNASRKS*ITFKG*KSFQSRLFLI 376
           F+A  F +FN   S  +P  +LPI   + +   W++   R + ++     +F+S+  L+
Sbjct: 216 FIAKYFSLFNSFVSDIIPCLLLPIVTVLLVMDLWKTAKKRANIVSVSNKNNFRSKTGLV 274


>Z81054-7|CAB02881.1|  472|Caenorhabditis elegans Hypothetical
           protein F01D4.4 protein.
          Length = 472

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 20/85 (23%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
 Frame = +2

Query: 380 KKSLDWKDFYPLNVIYDFLDALERQYPSICTVTVIGNTVEGRDVKMLKISNSNARN---- 547
           K   +W  ++    +   L  +  + P I T+  IG +VEGR + +++ S +   +    
Sbjct: 32  KDDAEWGHYHNQAQLEAKLGEINEKCPEITTLYEIGQSVEGRPLVVIQFSTTPGEHIPTK 91

Query: 548 TAVWLDGTIHAREWISTSVVTYIAD 622
             V L G +H  E I   ++   A+
Sbjct: 92  PEVKLIGNMHGNEPIGRELLLRFAE 116


>AL033514-32|CAA22112.1|  344|Caenorhabditis elegans Hypothetical
           protein Y75B8A.34 protein.
          Length = 344

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 17/53 (32%), Positives = 31/53 (58%)
 Frame = -2

Query: 633 LAI*SAMYVTTDVLIHSLACIVPSSQTAVFLALLFEIFNILTSLPSTVLPITV 475
           L I + +Y  T +   ++A  +  ++T++ L L+  IFN+L  LP   LP++V
Sbjct: 259 LLITAILYGVTQIFYEAIAFFL-ITETSLKLFLI-SIFNVLNYLPEISLPLSV 309


>Z81575-5|CAB04631.2|  353|Caenorhabditis elegans Hypothetical
           protein R08H2.5 protein.
          Length = 353

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +2

Query: 578 AREWISTSVVTYIADHIARSFNTLPDYIT 664
           A+E+ +TSV+  + DH  R +  LP  IT
Sbjct: 190 AQEFFTTSVLVVLIDHDMRKYAILPSAIT 218


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,627,161
Number of Sequences: 27780
Number of extensions: 337403
Number of successful extensions: 897
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 891
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -