Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9b03
(759 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5W7N5 Cluster: DNA cytosine-5 methyltransferase; n=1; ... 492 e-138
UniRef50_UPI0000D56DBB Cluster: PREDICTED: similar to DNA (cytos... 219 8e-56
UniRef50_O14717 Cluster: tRNA (cytosine-5-)-methyltransferase (E... 218 1e-55
UniRef50_Q7PE03 Cluster: ENSANGP00000024696; n=1; Anopheles gamb... 196 5e-49
UniRef50_Q177E1 Cluster: Cytosine-specific methyltransferase; n=... 193 3e-48
UniRef50_Q9U6H7 Cluster: DNA (5-cytosine) methyltransferase homo... 174 2e-42
UniRef50_A4ZHI6 Cluster: DNA methyltransferase 2; n=1; Artemia f... 165 1e-39
UniRef50_Q54JH6 Cluster: DNA (Cytosine-5-)-methyltransferase; n=... 161 2e-38
UniRef50_Q5MK09 Cluster: 5' cytosine DNA methyl transferase-like... 150 4e-35
UniRef50_Q8LER4 Cluster: DNA methyltransferase PMT1-like protein... 148 2e-34
UniRef50_P40999 Cluster: DNA methyltransferase homolog pmt1; n=1... 133 4e-30
UniRef50_A7SUR9 Cluster: Predicted protein; n=1; Nematostella ve... 132 9e-30
UniRef50_A4RZ97 Cluster: Predicted protein; n=2; Ostreococcus|Re... 116 6e-25
UniRef50_Q6B430 Cluster: 5-cytosine DNA methyltransferase; n=3; ... 112 8e-24
UniRef50_A4RZX8 Cluster: Predicted protein; n=2; Ostreococcus|Re... 97 4e-19
UniRef50_Q74GL9 Cluster: Type II DNA modification methyltransfer... 93 5e-18
UniRef50_P05302 Cluster: Modification methylase DdeI; n=1; Desul... 74 3e-12
UniRef50_UPI00015B5483 Cluster: PREDICTED: similar to CG10692-PC... 74 4e-12
UniRef50_A0ZNE2 Cluster: DNA methylase, C-5 cytosine-specific fa... 74 4e-12
UniRef50_Q8RNY1 Cluster: Cytosine-specific methyltransferase; n=... 73 1e-11
UniRef50_A7DPG1 Cluster: DNA-cytosine methyltransferase; n=1; Ca... 72 1e-11
UniRef50_Q8IBI4 Cluster: Modification methylase-like protein, pu... 71 3e-11
UniRef50_Q30PG8 Cluster: Cytosine-specific methyltransferase; n=... 69 1e-10
UniRef50_Q9ZHP3 Cluster: Cytosine-specific methyltransferase; n=... 69 1e-10
UniRef50_O52849 Cluster: Cytosine-specific methyltransferase; n=... 68 2e-10
UniRef50_O52850 Cluster: Cytosine-specific methyltransferase; n=... 66 9e-10
UniRef50_Q980M6 Cluster: DNA modification methylase, type II R/M... 66 9e-10
UniRef50_P45000 Cluster: Modification methylase HindV; n=8; Bact... 66 1e-09
UniRef50_UPI00015C492E Cluster: putative two-component sensor; n... 65 2e-09
UniRef50_A0S0I9 Cluster: Cytosine-specific methyltransferase; n=... 65 2e-09
UniRef50_A5K9Z4 Cluster: DNA (Cytosine-5)-methyltransferase-like... 65 2e-09
UniRef50_UPI00015C4464 Cluster: cytosine-specific methyltransfer... 65 2e-09
UniRef50_Q4Z534 Cluster: Modification methylase-like protein, pu... 65 2e-09
UniRef50_Q2IUT9 Cluster: DNA-cytosine methyltransferase; n=2; Al... 64 3e-09
UniRef50_A0ZH48 Cluster: Type II DNA modification enzyme; n=4; C... 64 5e-09
UniRef50_Q5D6Y7 Cluster: BbvCI methyltransferase 1; n=1; Breviba... 63 6e-09
UniRef50_A4AF81 Cluster: Cytosine-specific methyltransferase; n=... 62 1e-08
UniRef50_O34939 Cluster: YdiO protein; n=1; Bacillus subtilis|Re... 62 2e-08
UniRef50_A6QD13 Cluster: Cytosine-specific methyltransferase; n=... 61 3e-08
UniRef50_Q8VTD8 Cluster: Cytosine-specific methyltransferase; n=... 61 3e-08
UniRef50_Q4C3L0 Cluster: C-5 cytosine-specific DNA methylase; n=... 61 3e-08
UniRef50_A0YV45 Cluster: Cytosine specific DNA methyltransferase... 61 3e-08
UniRef50_A0H0W8 Cluster: DNA-cytosine methyltransferase; n=1; Ch... 61 3e-08
UniRef50_P50192 Cluster: Modification methylase HphIA (EC 2.1.1.... 61 3e-08
UniRef50_P34882 Cluster: Modification methylase AquI subunit alp... 61 3e-08
UniRef50_Q3M126 Cluster: C-5 cytosine-specific DNA methylase; n=... 60 4e-08
UniRef50_Q4C4N0 Cluster: C-5 cytosine-specific DNA methylase; n=... 60 4e-08
UniRef50_Q10VV2 Cluster: Cytosine-specific methyltransferase; n=... 60 6e-08
UniRef50_Q8YMV9 Cluster: Cytosine-specific methyltransferase; n=... 60 8e-08
UniRef50_Q8X8S5 Cluster: Cytosine-specific methyltransferase; n=... 60 8e-08
UniRef50_P52311 Cluster: Modification methylase XorII; n=6; Bact... 60 8e-08
UniRef50_A3FQI8 Cluster: DNA methyltransferase PMT1-like protein... 59 1e-07
UniRef50_Q6UQ63 Cluster: Cytosine-specific methyltransferase; n=... 59 1e-07
UniRef50_Q0KRI5 Cluster: Cytosine-specific methyltransferase; n=... 59 1e-07
UniRef50_P19888 Cluster: Modification methylase BanI; n=5; Bacte... 58 2e-07
UniRef50_Q5D6Y6 Cluster: BbvCI methyltransferase 2; n=1; Breviba... 58 2e-07
UniRef50_Q59380 Cluster: Eco29kIM; n=5; Bacteria|Rep: Eco29kIM -... 58 2e-07
UniRef50_A4X2E9 Cluster: Cytosine-specific methyltransferase; n=... 58 2e-07
UniRef50_Q9YAD7 Cluster: Cytosine-specific DNA methylase; n=4; T... 58 2e-07
UniRef50_Q6HMN7 Cluster: Modification methylase HpaII; n=1; Baci... 58 3e-07
UniRef50_Q83XX0 Cluster: Cytosine-specific methyltransferase; n=... 57 4e-07
UniRef50_A4XZL7 Cluster: Cytosine-specific methyltransferase; n=... 57 4e-07
UniRef50_Q8XTV8 Cluster: Cytosine-specific methyltransferase; n=... 57 5e-07
UniRef50_Q307B4 Cluster: Cytosine-specific methyltransferase; n=... 57 5e-07
UniRef50_Q1J4T9 Cluster: Type II restriction-modification system... 57 5e-07
UniRef50_Q20YF4 Cluster: DNA-cytosine methyltransferase; n=1; Rh... 56 7e-07
UniRef50_Q0T971 Cluster: Modification methylase; n=3; Escherichi... 56 7e-07
UniRef50_A4QCE7 Cluster: Putative uncharacterized protein; n=1; ... 56 9e-07
UniRef50_A0KH69 Cluster: Cytosine-specific methyltransferase; n=... 56 9e-07
UniRef50_Q858Z2 Cluster: Gp9.1; n=1; Streptomyces phage phiBT1|R... 56 9e-07
UniRef50_Q5JVT2 Cluster: tRNA aspartic acid methyltransferase 1;... 56 9e-07
UniRef50_P08455 Cluster: Modification methylase NgoPII; n=8; Bac... 56 9e-07
UniRef50_Q5ZZS4 Cluster: Cytosine-specific methyltransferase; n=... 56 1e-06
UniRef50_P09915 Cluster: Modification methylase Rho11sI; n=2; Si... 56 1e-06
UniRef50_Q83VT0 Cluster: EcoT38I methyltransferase; n=1; Enterob... 55 2e-06
UniRef50_P34906 Cluster: Modification methylase FnuDI; n=5; cell... 55 2e-06
UniRef50_Q3VKI0 Cluster: C-5 cytosine-specific DNA methylase; n=... 54 3e-06
UniRef50_A1VX43 Cluster: DNA-cytosine methyltransferase; n=2; Pr... 54 3e-06
UniRef50_P11408 Cluster: Modification methylase MspI; n=2; Gamma... 54 3e-06
UniRef50_A7BQ17 Cluster: C-5 cytosine-specific DNA methylase; n=... 54 4e-06
UniRef50_Q38652 Cluster: Type II DNA-methyltransferase; n=1; Pha... 54 4e-06
UniRef50_Q9KJH1 Cluster: Cytosine-specific methyltransferase; n=... 54 5e-06
UniRef50_Q59958 Cluster: Methyl transferase; n=13; Bacilli|Rep: ... 54 5e-06
UniRef50_Q3E2J7 Cluster: C-5 cytosine-specific DNA methylase; n=... 54 5e-06
UniRef50_O31098 Cluster: Cytosine-specific methyltransferase; n=... 54 5e-06
UniRef50_A7CAE2 Cluster: DNA-cytosine methyltransferase; n=1; Ra... 54 5e-06
UniRef50_Q72BW9 Cluster: Cytosine-specific methyltransferase; n=... 53 7e-06
UniRef50_A0ZJB7 Cluster: Cytosine-specific methyltransferase; n=... 53 7e-06
UniRef50_Q1ISM0 Cluster: DNA-cytosine methyltransferase; n=2; Ba... 53 9e-06
UniRef50_P09795 Cluster: Modification methylase SinI; n=3; Bacte... 53 9e-06
UniRef50_P31033 Cluster: Modification methylase NgoMIV; n=11; Ba... 53 9e-06
UniRef50_P50196 Cluster: Modification methylase Eco47II; n=6; Ba... 53 9e-06
UniRef50_P25264 Cluster: Modification methylase HgiCII; n=4; Her... 53 9e-06
UniRef50_Q9ZLZ0 Cluster: Cytosine-specific methyltransferase; n=... 52 1e-05
UniRef50_Q139N2 Cluster: DNA-cytosine methyltransferase; n=1; Rh... 52 1e-05
UniRef50_A1BCM3 Cluster: DNA-cytosine methyltransferase; n=3; Ba... 52 1e-05
UniRef50_A5EB64 Cluster: Cytosine-specific methyltransferase; n=... 52 2e-05
UniRef50_P05102 Cluster: Modification methylase HhaI; n=2; Bacte... 52 2e-05
UniRef50_Q59797 Cluster: Cytosine DNA methyltransferase homolog;... 52 2e-05
UniRef50_P94147 Cluster: Modification methylase AgeI; n=2; Bacte... 52 2e-05
UniRef50_UPI00003B93AB Cluster: putative methylase; n=1; Lactoba... 51 3e-05
UniRef50_Q70C92 Cluster: Cytosine-specific methyltransferase; n=... 51 3e-05
UniRef50_A7CVF0 Cluster: DNA-cytosine methyltransferase; n=1; Op... 51 3e-05
UniRef50_A3IWE3 Cluster: Cytosine-specific methyltransferase; n=... 51 4e-05
UniRef50_Q8EUE9 Cluster: Cytosine-specific methyltransferase; n=... 50 5e-05
UniRef50_Q4J279 Cluster: C-5 cytosine-specific DNA methylase; n=... 50 5e-05
UniRef50_A7BUQ1 Cluster: C-5 cytosine-specific DNA methylase; n=... 50 5e-05
UniRef50_Q81H80 Cluster: Cytosine-specific methyltransferase; n=... 50 6e-05
UniRef50_A3PUQ7 Cluster: Cytosine-specific methyltransferase; n=... 50 6e-05
UniRef50_A0LHW1 Cluster: DNA-cytosine methyltransferase; n=5; Pr... 50 6e-05
UniRef50_A0FZN6 Cluster: Cytosine-specific methyltransferase; n=... 50 6e-05
UniRef50_Q59606 Cluster: Modification methylase NgoFVII; n=9; Ba... 50 6e-05
UniRef50_Q9RPJ2 Cluster: Cytosine-specific methyltransferase; n=... 50 8e-05
UniRef50_Q307B3 Cluster: Cytosine-specific methyltransferase; n=... 50 8e-05
UniRef50_O30877 Cluster: Cytosine-specific methyltransferase; n=... 49 1e-04
UniRef50_O31073 Cluster: Modification methylase SacI; n=1; Strep... 49 1e-04
UniRef50_UPI00015B46FB Cluster: PREDICTED: similar to DNA (cytos... 49 1e-04
UniRef50_Q6UQ61 Cluster: TspRI methylase; n=1; Thermus sp. R|Rep... 49 1e-04
UniRef50_A6W3J0 Cluster: Cytosine-specific methyltransferase; n=... 49 1e-04
UniRef50_Q59995 Cluster: Cytosine-specific methyltransferase; n=... 48 2e-04
UniRef50_Q184Y5 Cluster: Cytosine-specific methyltransferase; n=... 48 2e-04
UniRef50_Q855N3 Cluster: Gp80; n=3; root|Rep: Gp80 - Mycobacteri... 48 3e-04
UniRef50_UPI0000DAF8EF Cluster: modification methylase HaeIII (C... 47 4e-04
UniRef50_Q89YH8 Cluster: Cytosine-specific methyltransferase; n=... 47 4e-04
UniRef50_Q28NA6 Cluster: Cytosine-specific methyltransferase; n=... 47 4e-04
UniRef50_Q97JQ1 Cluster: Cytosine-specific methyltransferase; n=... 46 8e-04
UniRef50_A3VJB1 Cluster: Cytosine-specific methyltransferase; n=... 46 8e-04
UniRef50_O13369 Cluster: Cytosine-specific methyltransferase; n=... 46 8e-04
UniRef50_Q8RNY3 Cluster: Cytosine-specific methyltransferase; n=... 46 0.001
UniRef50_Q88FU3 Cluster: DNA-cytosine methyltransferase; n=1; Ps... 46 0.001
UniRef50_Q70C77 Cluster: Cytosine-specific methyltransferase; n=... 46 0.001
UniRef50_Q0AMN2 Cluster: DNA (Cytosine-5-)-methyltransferase pre... 46 0.001
UniRef50_A3N1K4 Cluster: Modification methylase; n=5; Bacteria|R... 45 0.002
UniRef50_Q8JKX6 Cluster: Putative C5-cytosine methyltransferase;... 45 0.002
UniRef50_Q5WE27 Cluster: Cytosine-specific methyltransferase; n=... 45 0.002
UniRef50_Q5HMV5 Cluster: DNA-cytosine methyltransferase; n=1; St... 45 0.002
UniRef50_A7H0V8 Cluster: Cytosine-specific methyltransferase Nla... 45 0.002
UniRef50_P06530 Cluster: Modification methylase BsuRI; n=4; Baci... 45 0.002
UniRef50_A6U8S5 Cluster: Cytosine-specific methyltransferase; n=... 44 0.003
UniRef50_Q57983 Cluster: Probable modification methylase MJ0563;... 44 0.003
UniRef50_Q8YKD1 Cluster: Site-specific DNA-methyltransferase; n=... 44 0.004
UniRef50_Q64WM8 Cluster: Site-specific DNA-methyltransferase; n=... 44 0.004
UniRef50_Q9F6L2 Cluster: Cytosine-specific methyltransferase; n=... 44 0.004
UniRef50_Q4HNI4 Cluster: C-5 cytosine-specific DNA methylase; n=... 44 0.004
UniRef50_Q1EXN9 Cluster: Cytosine-specific methyltransferase; n=... 44 0.004
UniRef50_A1T430 Cluster: DNA-cytosine methyltransferase precurso... 44 0.004
UniRef50_Q98567 Cluster: Cytosine-specific methyltransferase; n=... 44 0.005
UniRef50_Q71I31 Cluster: Cytosine-specific methyltransferase; n=... 44 0.005
UniRef50_A7BCH4 Cluster: Putative uncharacterized protein; n=1; ... 44 0.005
UniRef50_A1WDJ0 Cluster: C-5 cytosine-specific DNA methylase; n=... 44 0.005
UniRef50_A0UIW9 Cluster: Cytosine-specific methyltransferase; n=... 44 0.005
UniRef50_P17044 Cluster: Modification methylase BsuFI; n=4; Bact... 44 0.005
UniRef50_Q72ZR3 Cluster: DNA-cytosine methyltransferase family p... 43 0.007
UniRef50_Q67PU8 Cluster: Site-specific DNA-methyltransferase; n=... 43 0.007
UniRef50_Q6QPZ2 Cluster: Cytosine-specific methyltransferase; n=... 43 0.007
UniRef50_A7LUQ6 Cluster: Putative uncharacterized protein; n=1; ... 43 0.007
UniRef50_A4X0Z6 Cluster: C-5 cytosine-specific DNA methylase; n=... 43 0.007
UniRef50_A3U4H1 Cluster: Cytosine-specific methyltransferase; n=... 43 0.007
UniRef50_A7IVW3 Cluster: Putative uncharacterized protein B088L;... 43 0.009
UniRef50_A1K3I3 Cluster: Cytosine-specific methyltransferase; n=... 43 0.009
UniRef50_Q4AM33 Cluster: C-5 cytosine-specific DNA methylase; n=... 42 0.013
UniRef50_A0GNZ6 Cluster: Cytosine-specific methyltransferase; n=... 42 0.013
UniRef50_A7A2L6 Cluster: Putative uncharacterized protein; n=1; ... 42 0.017
UniRef50_A7IXM2 Cluster: Putative uncharacterized protein B697R;... 42 0.022
UniRef50_Q5I6E7 Cluster: M.HinP1I methyltransferase; n=9; Proteo... 42 0.022
UniRef50_Q1MRD1 Cluster: Modification methylase BepI; n=1; Lawso... 42 0.022
UniRef50_Q92LC3 Cluster: Cytosine-specific methyltransferase; n=... 41 0.029
UniRef50_Q0RSU4 Cluster: Putative DNA Modification methylase; n=... 41 0.029
UniRef50_A6WZ22 Cluster: Cytosine-specific methyltransferase; n=... 41 0.029
UniRef50_Q2H497 Cluster: Cytosine-specific methyltransferase; n=... 41 0.029
UniRef50_P25282 Cluster: Modification methylase HgaIA; n=3; Prot... 41 0.029
UniRef50_P25283 Cluster: Modification methylase HgaIB; n=1; Avib... 41 0.038
UniRef50_Q9RLM4 Cluster: Probable modification methylase NmeDIP;... 41 0.038
UniRef50_A5TVS1 Cluster: Cytosine-specific methyltransferase; n=... 40 0.050
UniRef50_A3TMV4 Cluster: Cytosine-specific methyltransferase; n=... 40 0.050
UniRef50_A3WIX9 Cluster: Cytosine-specific methyltransferase; n=... 40 0.088
UniRef50_A6USQ3 Cluster: DNA-cytosine methyltransferase; n=1; Me... 40 0.088
UniRef50_A2SSP6 Cluster: DNA-cytosine methyltransferase; n=1; Me... 40 0.088
UniRef50_A1W7Y6 Cluster: DNA-cytosine methyltransferase; n=13; B... 39 0.12
UniRef50_A1DLL2 Cluster: C-5 cytosine methyltransferase DmtA; n=... 39 0.12
UniRef50_Q1MHY5 Cluster: Putative modification methylase; n=1; R... 39 0.15
UniRef50_Q027W7 Cluster: DNA-cytosine methyltransferase; n=1; So... 39 0.15
UniRef50_A6E290 Cluster: Putative uncharacterized protein; n=1; ... 39 0.15
UniRef50_Q65GH2 Cluster: Putative uncharacterized protein; n=2; ... 38 0.20
UniRef50_A7GF25 Cluster: DNA (Cytosine-5-)-methyltransferase; n=... 38 0.20
UniRef50_A4U323 Cluster: Modification methylase MthTI; n=1; Magn... 38 0.20
UniRef50_A6SAR0 Cluster: Cytosine-specific methyltransferase; n=... 38 0.20
UniRef50_P31974 Cluster: Modification methylase AluI; n=1; Cellu... 38 0.20
UniRef50_Q2W863 Cluster: Cytosine-specific methyltransferase; n=... 38 0.27
UniRef50_Q6SZ18 Cluster: Chromosome partitioning protein parB; n... 38 0.27
UniRef50_A4E6H8 Cluster: Cytosine-specific methyltransferase; n=... 38 0.27
UniRef50_Q5CUG1 Cluster: Putative uncharacterized protein; n=3; ... 38 0.27
UniRef50_Q8RNY6 Cluster: M5 cytosine DNA methyltransferase; n=3;... 38 0.36
UniRef50_Q4BWQ8 Cluster: C-5 cytosine-specific DNA methylase; n=... 38 0.36
UniRef50_A6WVF7 Cluster: Cytosine-specific methyltransferase; n=... 38 0.36
UniRef50_P34878 Cluster: Modification methylase ScrFIB; n=1; Lac... 38 0.36
UniRef50_Q8CWG2 Cluster: Cytosine-specific methyltransferase; n=... 37 0.47
UniRef50_Q607Y5 Cluster: Cytosine-specific methyltransferase; n=... 37 0.47
UniRef50_UPI00015C4900 Cluster: glutathionylspermidine synthase ... 37 0.62
UniRef50_Q4UN69 Cluster: Cytosine-specific methyltransferase; n=... 37 0.62
UniRef50_Q9RQS3 Cluster: Cytosine-specific methyltransferase; n=... 37 0.62
UniRef50_A2BPL0 Cluster: Cytosine-specific methyltransferase; n=... 37 0.62
UniRef50_A6R638 Cluster: Cytosine-specific methyltransferase; n=... 37 0.62
UniRef50_Q97IY5 Cluster: Cytosine-specific methyltransferase; n=... 36 0.82
UniRef50_Q60171 Cluster: M5C-multispecific methyltransferase (EC... 36 0.82
UniRef50_A5NRD5 Cluster: Cytosine-specific methyltransferase; n=... 36 0.82
UniRef50_A5IYC0 Cluster: Cytosine-specific methyltransferase; n=... 36 0.82
UniRef50_A7NVV8 Cluster: Chromosome chr5 scaffold_2, whole genom... 36 0.82
UniRef50_Q8Q059 Cluster: DNA-cytosine methyltransferase; n=3; Eu... 36 0.82
UniRef50_Q027X8 Cluster: DNA-cytosine methyltransferase; n=3; Ba... 36 1.1
UniRef50_A5FE12 Cluster: Putative uncharacterized protein; n=1; ... 36 1.1
UniRef50_Q4Y014 Cluster: Putative uncharacterized protein; n=1; ... 36 1.1
UniRef50_Q2U949 Cluster: Predicted protein; n=1; Aspergillus ory... 36 1.1
UniRef50_O42731 Cluster: Cytosine-specific methyltransferase; n=... 36 1.1
UniRef50_Q1ZE17 Cluster: DNA-methyltransferase; n=1; Psychromona... 36 1.4
UniRef50_A1JNI9 Cluster: Cytosine-specific methyltransferase; n=... 36 1.4
UniRef50_Q8IIK0 Cluster: Oligosacharyl transferase STT3 subunit,... 36 1.4
UniRef50_A2ENS5 Cluster: Putative uncharacterized protein; n=1; ... 36 1.4
UniRef50_Q2U3E6 Cluster: Predicted protein; n=1; Aspergillus ory... 36 1.4
UniRef50_A6RJV4 Cluster: Putative uncharacterized protein; n=1; ... 36 1.4
UniRef50_Q1YE76 Cluster: Possible cytosine-specific DNA methylas... 35 1.9
UniRef50_Q184L3 Cluster: Putative uncharacterized protein; n=3; ... 35 1.9
UniRef50_A6LAB6 Cluster: Cytosine-specific methyltransferase; n=... 35 1.9
UniRef50_Q8LPU5 Cluster: DNA (cytosine-5)-methyltransferase 3; n... 35 1.9
UniRef50_Q47A77 Cluster: Cytosine-specific methyltransferase; n=... 35 2.5
UniRef50_Q1DHS5 Cluster: Putative uncharacterized protein; n=2; ... 35 2.5
UniRef50_Q58600 Cluster: Probable modification methylase MJ1200;... 35 2.5
UniRef50_Q8EL95 Cluster: Putative modification methylase OB3336;... 35 2.5
UniRef50_Q9ACM3 Cluster: Cytosine-specific methyltransferase; n=... 34 3.3
UniRef50_Q17YS9 Cluster: Cytosine-specific methyltransferase; n=... 34 3.3
UniRef50_A3EHV1 Cluster: Site-specific DNA methylase; n=2; Vibri... 34 3.3
UniRef50_A0Q1D6 Cluster: Ribonucleoside-diphosphate reductase, b... 34 3.3
UniRef50_Q858D4 Cluster: Cytosine methylase; n=3; root|Rep: Cyto... 34 3.3
UniRef50_A7EA36 Cluster: Putative uncharacterized protein; n=1; ... 34 3.3
UniRef50_Q81XV4 Cluster: Prophage LambdaBa01, C-5 cytosine-speci... 34 4.4
UniRef50_A3VWG7 Cluster: Cytosine-specific methyltransferase; n=... 34 4.4
UniRef50_A1ZIH7 Cluster: Cytosine-specific methyltransferase; n=... 34 4.4
UniRef50_A2Y1R5 Cluster: Cytosine-specific methyltransferase; n=... 34 4.4
UniRef50_Q0CCX0 Cluster: Predicted protein; n=1; Aspergillus ter... 34 4.4
UniRef50_A7E505 Cluster: Putative uncharacterized protein; n=1; ... 34 4.4
UniRef50_UPI000023E2A8 Cluster: hypothetical protein FG08648.1; ... 33 5.8
UniRef50_Q7P2L5 Cluster: Hypothetical Exported Protein; n=3; Fus... 33 5.8
UniRef50_A6V4A0 Cluster: Modification methylase DdeI; n=1; Pseud... 33 5.8
UniRef50_A7QR08 Cluster: Chromosome undetermined scaffold_147, w... 33 5.8
UniRef50_Q73L96 Cluster: Sigma-54 dependent transcriptional regu... 33 7.7
UniRef50_O24895 Cluster: Cytosine-specific methyltransferase; n=... 33 7.7
UniRef50_Q1GFZ2 Cluster: Prophage LambdaSo; type II DNA modifica... 33 7.7
UniRef50_A6Q436 Cluster: Putative uncharacterized protein; n=1; ... 33 7.7
UniRef50_A5N2E9 Cluster: Phage-related protein; n=1; Clostridium... 33 7.7
UniRef50_Q6FLD9 Cluster: Similar to sp|P53917 Saccharomyces cere... 33 7.7
>UniRef50_Q5W7N5 Cluster: DNA cytosine-5 methyltransferase; n=1;
Bombyx mori|Rep: DNA cytosine-5 methyltransferase -
Bombyx mori (Silk moth)
Length = 336
Score = 492 bits (1214), Expect = e-138
Identities = 226/226 (100%), Positives = 226/226 (100%)
Frame = +3
Query: 81 MEEKMEHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNI 260
MEEKMEHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNI
Sbjct: 1 MEEKMEHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNI 60
Query: 261 QSLTPIEIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILM 440
QSLTPIEIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILM
Sbjct: 61 QSLTPIEIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILM 120
Query: 441 ENVKGFECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNNTWNFKRK 620
ENVKGFECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNNTWNFKRK
Sbjct: 121 ENVKGFECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNNTWNFKRK 180
Query: 621 DELITCLPKTFAKPHCLKDIIENNVPDDYLVPDKMLRKANIFDICY 758
DELITCLPKTFAKPHCLKDIIENNVPDDYLVPDKMLRKANIFDICY
Sbjct: 181 DELITCLPKTFAKPHCLKDIIENNVPDDYLVPDKMLRKANIFDICY 226
>UniRef50_UPI0000D56DBB Cluster: PREDICTED: similar to DNA
(cytosine-5)-methyltransferase-like protein 2 (Dnmt2)
(DNA methyltransferase homolog MmuIIP) (DNA MTase
homolog MmuIIP) (M.MmuIIP) (Met-2); n=2;
Endopterygota|Rep: PREDICTED: similar to DNA
(cytosine-5)-methyltransferase-like protein 2 (Dnmt2)
(DNA methyltransferase homolog MmuIIP) (DNA MTase
homolog MmuIIP) (M.MmuIIP) (Met-2) - Tribolium castaneum
Length = 579
Score = 219 bits (534), Expect = 8e-56
Identities = 113/217 (52%), Positives = 145/217 (66%), Gaps = 3/217 (1%)
Frame = +3
Query: 87 EKMEHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQS 266
+KME ILELYSGIGGMH A S ++G + AA+DIN AN VYK+NFP L +N+QS
Sbjct: 249 QKME--ILELYSGIGGMHWALKVSGVEGTIKAAVDINPTANSVYKHNFPHINLLNRNVQS 306
Query: 267 LTPIEIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMEN 446
LTP I K ++T+LMSPPCQPFTRNG D ND RT SF++ + IL L + IL+EN
Sbjct: 307 LTPQFINKLGVNTILMSPPCQPFTRNGLQEDINDERTKSFIHVLAILPDLKVTR-ILIEN 365
Query: 447 VKGFECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKR-NNTWNFKRKD 623
VKGFE S +R+L +E L CGF YQEF+L+P +G+PN+R RYYC+AK+ N +NFK
Sbjct: 366 VKGFERSKMRDLLIETLEKCGFNYQEFILTPTQIGIPNTRHRYYCLAKKPPNVFNFK-TG 424
Query: 624 ELITCLPKTFAKPHC--LKDIIENNVPDDYLVPDKML 728
L T P PHC + ++E N Y + DK+L
Sbjct: 425 VLKTEFPNQQNAPHCFEISKVLEQNELTPYYLTDKVL 461
>UniRef50_O14717 Cluster: tRNA (cytosine-5-)-methyltransferase (EC
2.1.1.29) (DNA (cytosine-5)- methyltransferase-like
protein 2); n=37; Euteleostomi|Rep: tRNA
(cytosine-5-)-methyltransferase (EC 2.1.1.29) (DNA
(cytosine-5)- methyltransferase-like protein 2) - Homo
sapiens (Human)
Length = 391
Score = 218 bits (532), Expect = 1e-55
Identities = 107/209 (51%), Positives = 143/209 (68%), Gaps = 3/209 (1%)
Frame = +3
Query: 102 RILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIE 281
R+LELYSG+GGMH A ES I +VVAAID+NTVAN+VYKYNFP T L K I+ +T E
Sbjct: 5 RVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEE 64
Query: 282 IEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTL-QYILMENVKGF 458
++ D +LMSPPCQPFTR G+ D D RTNSFL+ +DIL +L L +YIL+ENVKGF
Sbjct: 65 FDRLSFDMILMSPPCQPFTRIGRQGDMTDSRTNSFLHILDILPRLQKLPKYILLENVKGF 124
Query: 459 ECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAK-RNNTWNFKRKDELIT 635
E S+ R+L ++ + CGF YQEF+LSP S+G+PNSRLRY+ IAK ++ F+ +++
Sbjct: 125 EVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPGQVLM 184
Query: 636 CLPK-TFAKPHCLKDIIENNVPDDYLVPD 719
PK P +EN + + + P+
Sbjct: 185 EFPKIESVHPQKYAMDVENKIQEKNVEPN 213
>UniRef50_Q7PE03 Cluster: ENSANGP00000024696; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000024696 - Anopheles gambiae
str. PEST
Length = 227
Score = 196 bits (478), Expect = 5e-49
Identities = 94/184 (51%), Positives = 131/184 (71%)
Frame = +3
Query: 99 HRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPI 278
HR+LEL+SGIGGM A ++ + ++V+AID+N +AN+VYK+NF + NI SLT
Sbjct: 9 HRVLELFSGIGGMRMALEQAGKEFEIVSAIDVNPIANEVYKHNFGAKTVRNGNILSLTAE 68
Query: 279 EIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKGF 458
++ K K+DT+LMSPPCQPFTRNGK D ND R++ FL+ ++LDK+ +++ILMENVKGF
Sbjct: 69 KVTKLKVDTILMSPPCQPFTRNGKFNDINDRRSDPFLHICELLDKMPLVKFILMENVKGF 128
Query: 459 ECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNNTWNFKRKDELITC 638
E S ++ +L GF YQ+++LSP GVPN+R RYYCIAKR+ +FK K E I
Sbjct: 129 ENSQACEMYKARLREAGFHYQQYILSPHQFGVPNTRHRYYCIAKRHGA-DFKWKSEDIIT 187
Query: 639 LPKT 650
P++
Sbjct: 188 TPQS 191
>UniRef50_Q177E1 Cluster: Cytosine-specific methyltransferase; n=2;
Culicidae|Rep: Cytosine-specific methyltransferase -
Aedes aegypti (Yellowfever mosquito)
Length = 344
Score = 193 bits (471), Expect = 3e-48
Identities = 105/224 (46%), Positives = 142/224 (63%), Gaps = 4/224 (1%)
Frame = +3
Query: 96 EHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTP 275
E+++LEL+SGIGGMH A S + KVV+AIDIN VAN +Y +NF NI SLTP
Sbjct: 14 EYQVLELFSGIGGMHFAIERSGKRYKVVSAIDINPVANAIYNHNFGANKASNSNILSLTP 73
Query: 276 IEIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKG 455
I+K ++ +LMSPPCQPF+RNG D +D R + F++ D+LDK+ T+Q+IL+ENVKG
Sbjct: 74 DRIQKLGVNVILMSPPCQPFSRNGNFKDVDDRRADPFVHLCDLLDKIPTVQFILLENVKG 133
Query: 456 FECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNNTWNFKRKDELI- 632
FE S L+ +L+ GF ++E++LSP GVPN+R RYYC+AKR N DE++
Sbjct: 134 FERSQACELYKTRLSAAGFRFKEYILSPHDFGVPNTRHRYYCVAKRTEFRN--PSDEIVS 191
Query: 633 --TCLPKTFAKPHCLKDIIENNVPDDYLVPDKMLRK-ANIFDIC 755
T AK C E+ + YL+ D +LRK I DIC
Sbjct: 192 KPTLQHVGTAKRICDLVEPESEKLNRYLLKDDLLRKRLAIMDIC 235
>UniRef50_Q9U6H7 Cluster: DNA (5-cytosine) methyltransferase
homolog; n=7; Sophophora|Rep: DNA (5-cytosine)
methyltransferase homolog - Drosophila melanogaster
(Fruit fly)
Length = 345
Score = 174 bits (424), Expect = 2e-42
Identities = 85/199 (42%), Positives = 128/199 (64%), Gaps = 3/199 (1%)
Frame = +3
Query: 147 WNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIEIEKYKIDTVLMSPPC 326
+ ++ + G++VAA+D+NTVAN VY +N+ L+ T+NIQSL+ E+ K + + +LMSPPC
Sbjct: 19 FEDAQLDGQIVAALDVNTVANAVYAHNYGSNLVKTRNIQSLSVKEVTKLQANMLLMSPPC 78
Query: 327 QPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKGFECSTVRNLFVEKLTYC 506
QP TR G D D R+++ + ++ + L+YILMENVKGFE S RN F+E L
Sbjct: 79 QPHTRQGLQRDTEDKRSDALTHLCGLIPECQELEYILMENVKGFESSQARNQFIESLERP 138
Query: 507 GFVYQEFMLSPVSVGVPNSRLRYYCIAKRNNTWNFKRKDELITCLPKTFAKPHCLK---D 677
GF ++EF+L+P VPN+R RYYCIA++ + + F ++ +P A+ L +
Sbjct: 139 GFHWREFILTPTQFNVPNTRYRYYCIARKGSDFPF-AGGKIWEEMPGAIAQNQALSQIAE 197
Query: 678 IIENNVPDDYLVPDKMLRK 734
I+E NV D+LVPD +L K
Sbjct: 198 IVEENVSPDFLVPDDVLTK 216
>UniRef50_A4ZHI6 Cluster: DNA methyltransferase 2; n=1; Artemia
franciscana|Rep: DNA methyltransferase 2 - Artemia
sanfranciscana (Brine shrimp) (Artemia franciscana)
Length = 379
Score = 165 bits (400), Expect = 1e-39
Identities = 84/194 (43%), Positives = 124/194 (63%), Gaps = 2/194 (1%)
Frame = +3
Query: 93 MEH-RILELYSGIGGMHCAWN-ESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQS 266
ME+ ++LEL++G+GG+H A N + +VV + +IN A Y+ NF ++ +NI S
Sbjct: 1 MEYIQVLELFAGLGGLHIAVNNQKDANIQVVKSFEINVNAVKTYQENFGHDVVSNRNILS 60
Query: 267 LTPIEIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMEN 446
L+ E+ + ++ + MSPPCQPFTR GK LD ND R N+F + + +L + +QY+L+EN
Sbjct: 61 LSTEELFRQNVNAIFMSPPCQPFTRLGKKLDVNDDRCNAFHHVLKLLPRSPNIQYLLIEN 120
Query: 447 VKGFECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNNTWNFKRKDE 626
V GFE S +R+ +E L CGF EF+LSP GVPNSRLRYY +A++N + F + D
Sbjct: 121 VYGFESSKMRDTMLEILQSCGFYTIEFLLSPTDFGVPNSRLRYYLLARKNKKFTFCKHDH 180
Query: 627 LITCLPKTFAKPHC 668
T + K F P+C
Sbjct: 181 --TSIVKEF--PYC 190
>UniRef50_Q54JH6 Cluster: DNA (Cytosine-5-)-methyltransferase; n=1;
Dictyostelium discoideum AX4|Rep: DNA
(Cytosine-5-)-methyltransferase - Dictyostelium
discoideum AX4
Length = 379
Score = 161 bits (390), Expect = 2e-38
Identities = 85/179 (47%), Positives = 113/179 (63%), Gaps = 4/179 (2%)
Frame = +3
Query: 102 RILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIE 281
R+LE YSGIGGMH ES + +V+ + DINT AN YKY F E K+I+S + E
Sbjct: 5 RVLEFYSGIGGMHYGLQESGVDFQVIQSFDINTNANLNYKYTFNEDSS-QKSIESYSVEE 63
Query: 282 IEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKL-NTLQYILMENVKGF 458
+E +K + LMSPPCQPFTR G D+ D RTNSF + +D+L K+ + YIL+ENV GF
Sbjct: 64 LEGFKANAWLMSPPCQPFTRLGLQKDDQDNRTNSFFHLLDVLTKIKDPPTYILIENVFGF 123
Query: 459 E---CSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNNTWNFKRKDE 626
S R+ ++ L + +QEF LSP G+ N RLRY+CIAKRN NFK++ +
Sbjct: 124 AKKGSSNTRDHLLDTLIKMNYSFQEFHLSPQQFGLANQRLRYFCIAKRNGKLNFKKEQD 182
>UniRef50_Q5MK09 Cluster: 5' cytosine DNA methyl transferase-like
protein; n=1; Pristionchus pacificus|Rep: 5' cytosine
DNA methyl transferase-like protein - Pristionchus
pacificus
Length = 313
Score = 150 bits (363), Expect = 4e-35
Identities = 71/170 (41%), Positives = 105/170 (61%), Gaps = 1/170 (0%)
Frame = +3
Query: 81 MEEKMEHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNI 260
M E E ++LE Y GIGG+H A ++I + AA DINT N +Y++NFP T L NI
Sbjct: 4 MHEGEEVKVLEFYCGIGGIHFALKRTSIPFHIAAAFDINTTTNVIYRHNFPSTKLKESNI 63
Query: 261 QSLTPIEIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKL-NTLQYIL 437
Q ++ ++K + MSPPCQPFT G ++DPR +SF + L+K+ N ++I
Sbjct: 64 QGVSVSSLDKLGAELWTMSPPCQPFTLKGNRKGDDDPRCDSFKKLLHCLNKMSNRPRWIF 123
Query: 438 MENVKGFECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIA 587
+ENV F +++ + +E L G+ +E+MLSPV +G+PNSR RYY +A
Sbjct: 124 IENVSAFHSTSMHSTLIETLNTIGYRIEEYMLSPVQLGIPNSRPRYYLLA 173
>UniRef50_Q8LER4 Cluster: DNA methyltransferase PMT1-like protein;
n=4; Magnoliophyta|Rep: DNA methyltransferase PMT1-like
protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 383
Score = 148 bits (358), Expect = 2e-34
Identities = 77/172 (44%), Positives = 104/172 (60%), Gaps = 1/172 (0%)
Frame = +3
Query: 81 MEEKMEHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNI 260
+ EK ++LE YSGIGGM + S I +VV A +IN ANDVY++NF + NI
Sbjct: 9 INEKKPWQVLEFYSGIGGMRYSLMASGIVSEVVEAFEINDSANDVYQHNFKHRP-YQGNI 67
Query: 261 QSLTPIEIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTL-QYIL 437
QSLT +++KY D L+SPPCQP+TR G D R +SFL ++++ Q +
Sbjct: 68 QSLTAADLDKYNADAWLLSPPCQPYTRQGLQKHSGDARASSFLRILELIPHTTKPPQMLF 127
Query: 438 MENVKGFECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKR 593
+ENV GFE S + LT +V QEF+LSP+ GVP SR RY+C+AKR
Sbjct: 128 VENVVGFETSDTHMEMIGTLTKLDYVTQEFILSPLQFGVPYSRPRYFCLAKR 179
>UniRef50_P40999 Cluster: DNA methyltransferase homolog pmt1; n=1;
Schizosaccharomyces pombe|Rep: DNA methyltransferase
homolog pmt1 - Schizosaccharomyces pombe (Fission yeast)
Length = 330
Score = 133 bits (322), Expect = 4e-30
Identities = 73/166 (43%), Positives = 100/166 (60%), Gaps = 1/166 (0%)
Frame = +3
Query: 102 RILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIE 281
R+LELYSGIGGMH A N + I +V AIDIN AN++Y N + L +I +LT +
Sbjct: 8 RVLELYSGIGGMHYALNLANIPADIVCAIDINPQANEIYNLNHGK-LAKHMDISTLTAKD 66
Query: 282 IEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTL-QYILMENVKGF 458
+ + MSP CQPFTR G D DPR+ +FL +++L +N L +YIL+ENV+GF
Sbjct: 67 FDAFDCKLWTMSPSCQPFTRIGNRKDILDPRSQAFLNILNVLPHVNNLPEYILIENVQGF 126
Query: 459 ECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRN 596
E S + L CG+ E +LSP +PNSR R+Y +A+ N
Sbjct: 127 EESKAAEECRKVLRNCGYNLIEGILSPNQFNIPNSRSRWYGLARLN 172
>UniRef50_A7SUR9 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 226
Score = 132 bits (319), Expect = 9e-30
Identities = 73/173 (42%), Positives = 101/173 (58%), Gaps = 1/173 (0%)
Frame = +3
Query: 81 MEEKMEHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNI 260
M + R++E YSGIGGMH A +VVAA++I+T AN VY +NFP T ++ NI
Sbjct: 1 MADSSTFRVVEFYSGIGGMHYALKGCKKNAEVVAALEISTTANTVYGHNFPTTKIWNCNI 60
Query: 261 QSLTPIEIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKL-NTLQYIL 437
+ + ++MSPPCQP+T G DPR SFL+ + +L +L + +Y L
Sbjct: 61 EVCELCNVTTMPAIYMVMSPPCQPYTWVGLQGASKDPRALSFLHILSLLKRLQHPPKYWL 120
Query: 438 MENVKGFECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRN 596
+ENVKGFE S R F L +C F++S G+PNSRLRYY +AKR+
Sbjct: 121 IENVKGFETSDTR--FYILLAFC----NSFIVSSPQFGIPNSRLRYYLLAKRH 167
>UniRef50_A4RZ97 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 371
Score = 116 bits (279), Expect = 6e-25
Identities = 65/167 (38%), Positives = 96/167 (57%), Gaps = 4/167 (2%)
Frame = +3
Query: 102 RILELYSGIGGMHCAWNEST-IKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPI 278
R+LE+Y G+G MH A + + +V A D+N A D Y N+ T K++ S+
Sbjct: 30 RVLEMYCGVGVMHAALRRARGDEAEVCGAYDVNPNACDAYAMNYG-TRPSQKSLVSVAME 88
Query: 279 EIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTL---QYILMENV 449
+ K K + MSPPCQPFTR G LD +D R SF+ +D + K++ +Y+ +ENV
Sbjct: 89 TLVKTKAEAWAMSPPCQPFTRAGLKLDVDDGRAESFMRLVDEMVKMDASARPKYVFVENV 148
Query: 450 KGFECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAK 590
GFE S +R+ + L+ F QEF+L+P GVP SR RY+ +A+
Sbjct: 149 VGFETSRMRDALRDALSASAFHAQEFILTPTMFGVPYSRPRYFMLAR 195
>UniRef50_Q6B430 Cluster: 5-cytosine DNA methyltransferase; n=3;
Entamoeba|Rep: 5-cytosine DNA methyltransferase -
Entamoeba invadens
Length = 324
Score = 112 bits (270), Expect = 8e-24
Identities = 79/231 (34%), Positives = 126/231 (54%), Gaps = 8/231 (3%)
Frame = +3
Query: 84 EEKMEHRILELYSGIGGMHCAWNESTIKGKVV-AAIDINTVANDVYKYNFPETLLFTKNI 260
E K + RILE +SGIGG+ + S + AIDIN +AN +Y+ N+ E ++ KN+
Sbjct: 4 ETKPDLRILEFFSGIGGLRASLERSKVHTNTTFCAIDINEIANTIYEGNYKEKVV-VKNL 62
Query: 261 QSLTPIEIEKYKIDTVLMSPPCQPFTRN--GKNLDENDPRTNSFLY-FIDILDKL-NTLQ 428
+++ IE+ + + MSPPCQP+ + K+ D +DPR S L+ + D+L + N +
Sbjct: 63 DTVSVEWIEEKRANVWFMSPPCQPYNNSIMSKHKDIDDPRAKSVLHLYRDVLKNMENKPE 122
Query: 429 YILMENVKGFECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNNTWN 608
+I +ENV F+ S V + L + Q+ ++SP +G+PNSR RYY +A+
Sbjct: 123 HIFIENVPLFKESLVFKDIMCVLNELEYHIQDIVISPHQIGIPNSRTRYYVMAR------ 176
Query: 609 FKRKDELITCLPKTFAKPH--CLKDIIENNVPDDYLV-PDKMLRKANIFDI 752
K K E P TF K + +EN V ++ V + +L+K +FDI
Sbjct: 177 -KTKFE----TPCTFVKYENVSVSTFLENTVDVNFEVKKELLLKKGMLFDI 222
>UniRef50_A4RZX8 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 398
Score = 97.1 bits (231), Expect = 4e-19
Identities = 70/187 (37%), Positives = 99/187 (52%), Gaps = 12/187 (6%)
Frame = +3
Query: 63 VNVSSTMEEKMEHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETL 242
V V+ST + R++ELYSGIG A E + K A+D + AN VY+ NF +
Sbjct: 33 VRVASTRDA----RLVELYSGIGATRLAL-EPLVTLKSAIAVDNSDAANAVYEANFADAP 87
Query: 243 LFTKNIQSLTPIEI----------EKYKIDTVL-MSPPCQPFTRNGKNLDENDPRTNSFL 389
N++ L + + + D VL +SPPCQP+TR GK L DPR SF
Sbjct: 88 RRV-NVEHLDLNALFASGNGDEGRQGRRNDYVLTVSPPCQPYTRRGKGLASEDPRARSFH 146
Query: 390 YFIDILDKLNTL-QYILMENVKGFECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSR 566
ID L + + + I +ENV GFE S R + L + +EF++SP+++G+P SR
Sbjct: 147 AVIDQLRAIEHVPRRIFVENVVGFESSDTRRALLNALGSRRYDVREFIVSPMALGIPYSR 206
Query: 567 LRYYCIA 587
RYY IA
Sbjct: 207 SRYYLIA 213
>UniRef50_Q74GL9 Cluster: Type II DNA modification
methyltransferase, putative; n=2; Geobacter|Rep: Type II
DNA modification methyltransferase, putative - Geobacter
sulfurreducens
Length = 305
Score = 93.5 bits (222), Expect = 5e-18
Identities = 53/169 (31%), Positives = 89/169 (52%), Gaps = 3/169 (1%)
Frame = +3
Query: 102 RILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIE 281
R +EL+ GIGG A + ++ VVAA+D + A Y+ NFP +++ ++ E
Sbjct: 2 RAVELFCGIGGFAAAVEGTGVR--VVAAMDQDEAALATYRLNFPGHGARKVDLERVSAWE 59
Query: 282 IEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLN---TLQYILMENVK 452
+ +D +SPPCQP+ G D DPR S ++ +++ +++ +++ +ENV
Sbjct: 60 LTAGGVDLWWLSPPCQPYCERGVRRDLADPRARSLVHILNLAARMSDEALPRHLALENVA 119
Query: 453 GFECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNN 599
GF S E L+ G+ QE +L P +G+P+ R RYY A R +
Sbjct: 120 GFVGSEAHGRLTEVLSSRGYRLQERLLCPTELGIPSRRPRYYLAASRES 168
>UniRef50_P05302 Cluster: Modification methylase DdeI; n=1;
Desulfomicrobium norvegicum|Rep: Modification methylase
DdeI - Desulfomicrobium norvegicum (DSM 1741 / NCIMB
8310) (Desulfovibriobaculatus (strain Norway 4))
(Desulfovibrio desulfuricans (strainNorway 4))
Length = 415
Score = 74.1 bits (174), Expect = 3e-12
Identities = 47/173 (27%), Positives = 90/173 (52%), Gaps = 8/173 (4%)
Frame = +3
Query: 105 ILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTP--I 278
I++L++G GG + + + AI+ + A+ Y +N P + T++I +L P +
Sbjct: 3 IIDLFAGCGGFSHGFKMAGYNS--ILAIEKDLWASQTYSFNNPNVSVITEDITTLDPGDL 60
Query: 279 EIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKGF 458
+I +D ++ PPCQ F+ +G N D+ DPR + F+ F+ + K + ++ +MENV G
Sbjct: 61 KISVSDVDGIIGGPPCQGFSLSG-NRDQKDPRNSLFVDFVRFV-KFFSPKFFVMENVLGI 118
Query: 459 ------ECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNN 599
V+++ E+ + G+ +L+ GVP SR R + I +++
Sbjct: 119 LSMKTKSRQYVKDIIAEEFSNVGYKVCVIILNACDYGVPQSRQRVFFIGLKSD 171
>UniRef50_UPI00015B5483 Cluster: PREDICTED: similar to CG10692-PC;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
CG10692-PC - Nasonia vitripennis
Length = 325
Score = 73.7 bits (173), Expect = 4e-12
Identities = 51/136 (37%), Positives = 71/136 (52%), Gaps = 26/136 (19%)
Frame = +3
Query: 423 LQYILMENVKGFECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNNT 602
+ YIL+ENVKGFE S RN + L GF Y+E +LSP G+PNSR RYY IAKR
Sbjct: 72 IDYILLENVKGFESSQARNEVILCLEKSGFNYKELILSPCQFGIPNSRHRYYLIAKRKGL 131
Query: 603 WNFKRKDELITCLPKTF-----------------------AKPHC--LKDIIENNVPDDY 707
LIT +P+ +K C LK I+E+NV +++
Sbjct: 132 KFIFDDASLITSIPEKVLELLPKNRYTSVPLEDGTHSSIKSKGKCFKLKYILESNVVENF 191
Query: 708 LVPDK-MLRKANIFDI 752
L+P K +L++ ++ DI
Sbjct: 192 LIPGKILLKRGSLLDI 207
>UniRef50_A0ZNE2 Cluster: DNA methylase, C-5 cytosine-specific
family protein; n=1; Nodularia spumigena CCY 9414|Rep:
DNA methylase, C-5 cytosine-specific family protein -
Nodularia spumigena CCY 9414
Length = 318
Score = 73.7 bits (173), Expect = 4e-12
Identities = 48/185 (25%), Positives = 95/185 (51%), Gaps = 12/185 (6%)
Frame = +3
Query: 93 MEHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLT 272
M+H+I++L++G GG+ ++ + + AIDI+ A YK+N+P T + ++I+ +
Sbjct: 1 MKHKIIDLFAGAGGLTTGFDMEGFES--LCAIDIDAKALATYKHNYPNTKIIHQDIRQVN 58
Query: 273 P------IEIEKYKIDTVLMSPPCQPFTRN--GKNLDENDPRTNSFLYFIDILDKLNTLQ 428
P + + + ++ ++ PPCQ F+RN ND R + F++ +++ L
Sbjct: 59 PSDLRLALGLRQEELTVLIGGPPCQGFSRNTPAGYRYLNDSRNQLYRTFLEFVEEFRPL- 117
Query: 429 YILMENV----KGFECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRN 596
Y ++ENV K + VR ++L G+ L+ G+P +R R + +A +
Sbjct: 118 YAVIENVPEILKAYN-GVVREEITKQLESLGYKVISSSLNAAHYGIPQTRSRAFFLASLD 176
Query: 597 NTWNF 611
N+ +F
Sbjct: 177 NSLHF 181
>UniRef50_Q8RNY1 Cluster: Cytosine-specific methyltransferase; n=1;
Acinetobacter lwoffii|Rep: Cytosine-specific
methyltransferase - Acinetobacter lwoffii
Length = 952
Score = 72.5 bits (170), Expect = 1e-11
Identities = 60/193 (31%), Positives = 97/193 (50%), Gaps = 8/193 (4%)
Frame = +3
Query: 45 VICFFFVNVSSTMEEKME--HRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVY 218
V C F + S ++E + + +L++G GGM ++ +K + A D A +
Sbjct: 707 VPCLFAQAIGSRLKEIVPTLNTFGDLFAGAGGMSQGMFQAGLKP--IFANDCFLSACISH 764
Query: 219 KYNFPETLLFTKNI-QSLTPIEIEKY--KIDTVLMSPPCQPFTRNGKNLDENDPRTNSFL 389
K N PET + +I ++ T +I +Y KID + PPCQ F++ GK + + DPR FL
Sbjct: 765 KANHPETDVIYGDISEAHTKQKIYQYANKIDILCGGPPCQGFSQAGKRIID-DPRNQLFL 823
Query: 390 YFIDILDKLNTLQYILMENVKGFECSTVRNLF---VEKLTYCGFVYQEFMLSPVSVGVPN 560
FI+ + +N + ++MENV+GF N + E L G+V + +L+ V GVP
Sbjct: 824 EFIESISVINP-KVVVMENVQGFLTLDKGNFYDQTKELLEELGYVCEGRLLNTVHYGVPQ 882
Query: 561 SRLRYYCIAKRNN 599
R R + N
Sbjct: 883 KRKRVIILGVHKN 895
>UniRef50_A7DPG1 Cluster: DNA-cytosine methyltransferase; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep:
DNA-cytosine methyltransferase - Candidatus
Nitrosopumilus maritimus SCM1
Length = 360
Score = 72.1 bits (169), Expect = 1e-11
Identities = 45/167 (26%), Positives = 81/167 (48%), Gaps = 4/167 (2%)
Frame = +3
Query: 90 KMEHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSL 269
K E +++L++G GG+ + + K V+AA++ + A + Y NF ET L +I+++
Sbjct: 3 KEEIGVIDLFAGSGGLSLGFKNAGFK--VIAAVEFDKSAAETYSKNFKETKLIVDDIKNI 60
Query: 270 TPIEIEKYKIDT---VLMSPPCQPFTR-NGKNLDENDPRTNSFLYFIDILDKLNTLQYIL 437
E++K V+ PPCQP++ N +N +N P N+ ++ I+ +L Q L
Sbjct: 61 KSNELKKITSKERFCVIGGPPCQPYSNANKQNNGKNHPFANAINHYFRIISELKP-QAFL 119
Query: 438 MENVKGFECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYY 578
ENV F F+ G++ ++ G+P R R +
Sbjct: 120 FENVTNFRNLPGWKKFLNDFKKLGYILSVSVIDCEKAGLPQKRKRLF 166
>UniRef50_Q8IBI4 Cluster: Modification methylase-like protein,
putative; n=1; Plasmodium falciparum 3D7|Rep:
Modification methylase-like protein, putative -
Plasmodium falciparum (isolate 3D7)
Length = 706
Score = 70.9 bits (166), Expect = 3e-11
Identities = 38/97 (39%), Positives = 59/97 (60%), Gaps = 6/97 (6%)
Frame = +3
Query: 357 DENDPRTNSFLYFIDILDKL---NTLQYILMENVKGFECSTVRNLFVEKLTYC---GFVY 518
++ D RT SF++ +L K+ N +YI +ENVK FE S+ F+ YC + +
Sbjct: 251 NDKDERTKSFIHICTLLTKVDFKNLPEYIFIENVKNFELSSSFIYFL----YCIKNNYSF 306
Query: 519 QEFMLSPVSVGVPNSRLRYYCIAKRNNTWNFKRKDEL 629
Q ++LSP+ G+PN RLR+YCI K+ N ++FK + L
Sbjct: 307 QTYLLSPLQFGIPNERLRFYCICKKKN-YDFKHANNL 342
Score = 33.1 bits (72), Expect = 7.7
Identities = 12/47 (25%), Positives = 25/47 (53%)
Frame = +3
Query: 222 YNFPETLLFTKNIQSLTPIEIEKYKIDTVLMSPPCQPFTRNGKNLDE 362
+N + + +I ++ P + + + +L+S PCQP+TR + E
Sbjct: 149 FNINKNYIIQTDINNIMPEFLNNHHFNILLISNPCQPYTRQNQKFKE 195
>UniRef50_Q30PG8 Cluster: Cytosine-specific methyltransferase; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep:
Cytosine-specific methyltransferase - Thiomicrospira
denitrificans (strain ATCC 33889 / DSM 1351)
Length = 657
Score = 69.3 bits (162), Expect = 1e-10
Identities = 56/180 (31%), Positives = 92/180 (51%), Gaps = 17/180 (9%)
Frame = +3
Query: 108 LELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNF----PETL---LFTKNIQS 266
++L++GIGG H A +E + G+ V A +I+ A YKYNF PE LF ++I++
Sbjct: 9 IDLFAGIGGFHQAMHE--LGGECVFASEIDIYARKTYKYNFKKYSPELFENGLFNEDIKT 66
Query: 267 LTPIEIEKYKIDTVLMSPPCQPFTRNGK--NLDENDPRTNSFLYF-IDILDKLNTLQYIL 437
+ P EI + D + PCQPF++ GK D+N L+F I + K+ +
Sbjct: 67 IMPEEIPDF--DLLCAGFPCQPFSQAGKKYGFDDNHKSERGNLFFDIAEIIKVKRPKAFF 124
Query: 438 MENVKGF-------ECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRN 596
+ENV+G T++++ E+L Y F +Q ++ G+P R R + I R+
Sbjct: 125 LENVRGLVNHDNGNTFKTIQHILTEELGY-SFYHQ--IIKASDYGLPQLRPRTFMIGFRD 181
>UniRef50_Q9ZHP3 Cluster: Cytosine-specific methyltransferase; n=4;
Cyanobacteria|Rep: Cytosine-specific methyltransferase -
Nostoc sp. (strain PCC 7524)
Length = 397
Score = 69.3 bits (162), Expect = 1e-10
Identities = 51/199 (25%), Positives = 97/199 (48%), Gaps = 8/199 (4%)
Frame = +3
Query: 60 FVNVSSTMEEKMEHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPET 239
F++V++ + ++ ++L+ G GG+ ++ + +A+++I+ +A+ ++ NFP
Sbjct: 47 FIDVNTPLIPASQYTFVDLFCGAGGITQGLVQAGFQA--LASVEISPIASATHQRNFPHC 104
Query: 240 LLFTKNIQSLTPI----EIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDIL 407
F +I+ P +I +++ V+ PPCQ F+ GK D DPR F F+ ++
Sbjct: 105 HHFWGDIEQFYPKSWLQQIGYPEVNLVVGGPPCQGFSVAGKR-DPKDPRNRLFYEFVRVV 163
Query: 408 DKLNTLQYILMENVKG---FECSTVRNLFVEKLTYCGFVYQEF-MLSPVSVGVPNSRLRY 575
++ Y++MENV G + V+ +E G+ + +L GVP R R
Sbjct: 164 SEIRP-WYVVMENVPGILTIQNGNVKQAIIEAFESIGYPHVSVAILESADYGVPQIRPRA 222
Query: 576 YCIAKRNNTWNFKRKDELI 632
IA R N K +L+
Sbjct: 223 IFIANRFGMPNPYPKAQLL 241
>UniRef50_O52849 Cluster: Cytosine-specific methyltransferase; n=1;
Bacillus pumilus|Rep: Cytosine-specific
methyltransferase - Bacillus pumilus (Bacillus
mesentericus)
Length = 398
Score = 68.1 bits (159), Expect = 2e-10
Identities = 42/168 (25%), Positives = 88/168 (52%), Gaps = 8/168 (4%)
Frame = +3
Query: 108 LELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIEIE 287
++L++G GGM + + + + A++I+ A D Y+ N + + +I + +
Sbjct: 11 IDLFAGAGGMSLGFENAGFE--IPLAVEIDDWAVDTYRKNRENSNVIKNDILEIDNAFFK 68
Query: 288 KYK-IDTVLMSPPCQPFTRNGKNL-DENDPRTNSFLYFIDILDKLNTLQYILMENVKGFE 461
++ ID V+ PPCQ F+ + N + +DPR + F+ ++ KL + + MENVK
Sbjct: 69 QFSGIDAVIGGPPCQGFSISASNRRNPDDPRNYLYRQFLRVI-KLVKPRIVFMENVKEIV 127
Query: 462 CSTVRN--LFVEKLTYC----GFVYQEFMLSPVSVGVPNSRLRYYCIA 587
+ N L ++++ +C G+ + F+++ G+P R+R++ +A
Sbjct: 128 KFVLPNGKLLLDEIIFCLEELGYSIKPFIINAADFGIPQERIRFFMVA 175
>UniRef50_O52850 Cluster: Cytosine-specific methyltransferase; n=1;
Bacillus pumilus|Rep: Cytosine-specific
methyltransferase - Bacillus pumilus (Bacillus
mesentericus)
Length = 392
Score = 66.1 bits (154), Expect = 9e-10
Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 9/175 (5%)
Frame = +3
Query: 108 LELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIEIE 287
L+L+SG GG + IK + AI+++ A++ ++ NFPE + NI EI
Sbjct: 5 LDLFSGAGGFTLGLKNAGIK--TIGAIELDRFASETFRKNFPEIPHYQANITEYGDSEII 62
Query: 288 K-YK-IDTVLMSPPCQPFTRNG-KNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKGF 458
K +K +D + PPCQ F+ G D R N + L +++ENVKG
Sbjct: 63 KLFKGVDIITGGPPCQGFSVAGPSQYGIIDNRNNLIMEMYRFASILKP-NLVILENVKGI 121
Query: 459 ---ECSTVRNL---FVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNNTW 605
+ S + ++ ++ G+ + F+L+ GVP R R + IA RN +
Sbjct: 122 LNGKLSPTKKALDEYMNNMSNIGYKIKVFVLNTSDFGVPQGRQRVFVIAARNEAF 176
>UniRef50_Q980M6 Cluster: DNA modification methylase, type II R/M
system; n=14; Archaea|Rep: DNA modification methylase,
type II R/M system - Sulfolobus solfataricus
Length = 325
Score = 66.1 bits (154), Expect = 9e-10
Identities = 54/171 (31%), Positives = 85/171 (49%), Gaps = 12/171 (7%)
Frame = +3
Query: 102 RILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIE 281
+I++L+SG GG + + I+ K+ AIDIN A Y NFP T++ +I+ ++ E
Sbjct: 5 KIIDLFSGAGGFSLGFKKLGIEPKL--AIDINHAATRTYSLNFPNTIVIEDDIREISGGE 62
Query: 282 IEK---YKIDTVLMSPPCQPFT-----RNGKNLDE--NDPRTNSFLYFIDILDKLNTLQY 431
I K ID V+ PPC+ +T R LD D R N L FI I+D++ +
Sbjct: 63 ILKNVGNDIDVVIGGPPCEGYTAANPLRMQDPLDRLYLDQRGNLTLEFIRIVDEVKP-KI 121
Query: 432 ILMENVKG-FECSTVRNLFVEKLTYCGFVYQEF-MLSPVSVGVPNSRLRYY 578
+MENV E ++R+ + + G+ F +L G P+ R R +
Sbjct: 122 FVMENVPAIIETQSLRDALINEFKKAGYGNIFFNILHAEDYGNPSKRSRVF 172
>UniRef50_P45000 Cluster: Modification methylase HindV; n=8;
Bacteria|Rep: Modification methylase HindV - Haemophilus
influenzae
Length = 304
Score = 65.7 bits (153), Expect = 1e-09
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 2/200 (1%)
Frame = +3
Query: 102 RILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIE 281
+ ++L+SG GG+ + + + + AA + A ++YK NF + +E
Sbjct: 2 KCVDLFSGCGGLSLGFELAGFE--ICAAFENWEKAIEIYKNNFSHPIYNIDLRNEKEAVE 59
Query: 282 -IEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKGF 458
I+KY D ++ PPCQ F+ GK D + R + F +I+ + ++ +MENV+
Sbjct: 60 KIKKYSPDLIMGGPPCQDFSSAGKR-DISLGRADLTYSFANIVCNIRP-KWFVMENVEQI 117
Query: 459 ECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNNTWNFKRKDELITC 638
+ S + + + G+ +L GVP SR R+ I K N+ NF LI
Sbjct: 118 KKSHILQDIINQFIDFGYGLTSAILDASYCGVPQSRTRFSLIGKLNSEHNF-----LIPT 172
Query: 639 LPKTFA-KPHCLKDIIENNV 695
L + + KP ++D + N++
Sbjct: 173 LSRKLSDKPMTVRDYLGNSL 192
>UniRef50_UPI00015C492E Cluster: putative two-component sensor; n=1;
Campylobacter concisus 13826|Rep: putative two-component
sensor - Campylobacter concisus 13826
Length = 489
Score = 65.3 bits (152), Expect = 2e-09
Identities = 53/205 (25%), Positives = 99/205 (48%), Gaps = 10/205 (4%)
Frame = +3
Query: 105 ILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPE---TLLFTKNIQSLTP 275
I++L+ G GG ++ S + ++ A DI+ A Y +N PE + + +++ ++
Sbjct: 118 IIDLFCGAGGF--SYGFSKMGYNILLANDIDKDALRTYSFNHPEINSSRIINDDVKLISQ 175
Query: 276 IEIEKY---KIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMEN 446
I KY ++D ++ PPCQ F+ + +DPR + YF+ ++ L ++I+MEN
Sbjct: 176 -NIHKYVNLQVDMIIGGPPCQSFSSANQQRVIDDPRNVLYKYFVKFVNDLKP-KFIIMEN 233
Query: 447 VKGFECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLR--YYCIAKRNNTWNFKRK 620
V+G V N VE G+ + + + VP R+R Y I K + +
Sbjct: 234 VRGM--LKVANQVVEDFDKIGYTAKYRLYDATNFSVPQKRIRLIYIGINKEYSKKHNLDV 291
Query: 621 DELITCLPKTFA--KPHCLKDIIEN 689
D++++ + K LKD ++N
Sbjct: 292 DKIMSDIENETKKNKKFILKDALDN 316
>UniRef50_A0S0I9 Cluster: Cytosine-specific methyltransferase; n=1;
Acinetobacter venetianus|Rep: Cytosine-specific
methyltransferase - Acinetobacter venetianus
Length = 737
Score = 65.3 bits (152), Expect = 2e-09
Identities = 49/187 (26%), Positives = 85/187 (45%), Gaps = 10/187 (5%)
Frame = +3
Query: 93 MEHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLT 272
M + L++G GG+ + E+ + A DI A Y YN+P F ++I+ +
Sbjct: 6 MALNFISLFTGAGGLDIGFKEAG--HNCLLASDIMKEAELTYSYNYPSVPFFREDIRQIP 63
Query: 273 PIEIEKY----KIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILM 440
+ +K ++D ++ PPCQ F+ G N + +DPR F ++ +++ + L
Sbjct: 64 LDKFKKVIGDKEVDVIIGGPPCQGFSNMG-NKNSSDPRNYLFENYVSLVNTFKP-KCFLF 121
Query: 441 ENVKG----FECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKR--NNT 602
ENVKG FE N+ V G+ ++ GVP R R + + R +
Sbjct: 122 ENVKGLLTMFEGRFFENI-VNSFLSIGYSISYTLIDSSLYGVPQKRERVFLMGTRLQHKK 180
Query: 603 WNFKRKD 623
+NF + D
Sbjct: 181 FNFPKPD 187
Score = 44.8 bits (101), Expect = 0.002
Identities = 46/183 (25%), Positives = 78/183 (42%), Gaps = 17/183 (9%)
Frame = +3
Query: 102 RILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFP-----ETLLFTKNIQS 266
R +L+SG+GG + + + D + A + Y+ N E L + IQ
Sbjct: 372 RFADLFSGVGGFTEGLKSAGLD--CILGADFDRYAVEAYRKNHTDHECLEADLSDEEIQH 429
Query: 267 LTPIEIEKYKIDTVLMSPPCQPFTRNGKNLDEN--------DPRTNSFLYFIDILDKLNT 422
+ +++ K+D V+ PPCQ F+ GK N D R N F +I+ K +
Sbjct: 430 NIAMRLKEQKVDLVVGGPPCQGFSIFGKRRFVNTKNHQISEDKRNNLVFAFANIVIK-SE 488
Query: 423 LQYILMENVKGFECSTVRNLFV----EKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAK 590
++ +MENV G S +V E G+ + +++ GVP R R+ I
Sbjct: 489 AKWFIMENVPGI-LSAQNGEYVKAIQEFFAENGYRTECKVINAADYGVPQLRKRFLLIGT 547
Query: 591 RNN 599
+ +
Sbjct: 548 KTD 550
>UniRef50_A5K9Z4 Cluster: DNA (Cytosine-5)-methyltransferase-like
protein 2, putative; n=1; Plasmodium vivax|Rep: DNA
(Cytosine-5)-methyltransferase-like protein 2, putative
- Plasmodium vivax
Length = 807
Score = 65.3 bits (152), Expect = 2e-09
Identities = 31/83 (37%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Frame = +3
Query: 360 ENDPRTNSFLYFIDILDKL---NTLQYILMENVKGFECSTVRNLFVEKLTYCGFVYQEFM 530
E D R+ SF + ++L K+ N +YI +ENV+ FE S+ F+ + + +Q ++
Sbjct: 303 EKDERSRSFFHICNLLKKVKEENLPKYIFIENVRNFELSSSFLYFINSVKK-NYNFQTYL 361
Query: 531 LSPVSVGVPNSRLRYYCIAKRNN 599
LSP+ G+PN RLR+YCI +R +
Sbjct: 362 LSPLQYGIPNERLRFYCICRRKD 384
>UniRef50_UPI00015C4464 Cluster: cytosine-specific
methyltransferase; n=1; Streptococcus gordonii str.
Challis substr. CH1|Rep: cytosine-specific
methyltransferase - Streptococcus gordonii str. Challis
substr. CH1
Length = 406
Score = 64.9 bits (151), Expect = 2e-09
Identities = 48/177 (27%), Positives = 86/177 (48%), Gaps = 4/177 (2%)
Frame = +3
Query: 66 NVSSTMEEKMEHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLL 245
+VSS EK + I +SG+GG+ + E T + +VV A + + A Y+ N P+T L
Sbjct: 4 SVSSNRPEK--YNIAAFFSGVGGIELGF-EQTNEFRVVYANEFDKYARQTYQLNHPDTYL 60
Query: 246 FTKNIQSLTPIEIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTL 425
++I + P +I ++D ++ PCQ F+ G +D R + F + +++
Sbjct: 61 DGRDIHDVQPEDIPAERVDVIMGGFPCQAFSIAGYRKGFDDDRGDLFFELLRMIEGCRP- 119
Query: 426 QYILMENVK---GFECSTVRNLFVEKLTYCGFVYQEFMLSPVSVG-VPNSRLRYYCI 584
+ I +ENVK G + + E LT + + +L+ G +P +R R Y +
Sbjct: 120 RAIFIENVKNMVGHDHGNTFKVIREALTENNYFIKWKVLNGKDYGNIPQNRERIYIV 176
>UniRef50_Q4Z534 Cluster: Modification methylase-like protein,
putative; n=3; Plasmodium (Vinckeia)|Rep: Modification
methylase-like protein, putative - Plasmodium berghei
Length = 689
Score = 64.9 bits (151), Expect = 2e-09
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Frame = +3
Query: 360 ENDPRTNSFLYFIDILDKLNTL---QYILMENVKGFECSTVRNLFVEKLTYCGFVYQEFM 530
E D R SF + ++L +N +YI +ENVK FE S F+ + + +Q ++
Sbjct: 254 EKDKRVYSFFHVCNLLKNMNVNNLPKYIFIENVKNFESSFSFLYFINSIKN-NYNFQTYL 312
Query: 531 LSPVSVGVPNSRLRYYCIAKRNNTWN 608
LSP+ G+PN RLR+YCI KR + N
Sbjct: 313 LSPLQFGIPNERLRFYCICKRKSNDN 338
Score = 38.3 bits (85), Expect = 0.20
Identities = 21/56 (37%), Positives = 32/56 (57%)
Frame = +3
Query: 195 NTVANDVYKYNFPETLLFTKNIQSLTPIEIEKYKIDTVLMSPPCQPFTRNGKNLDE 362
N +N + N + +L T +I +LTP + +K +L+S PCQP+TR KN E
Sbjct: 134 NHNSNFISDLNDKDYILQT-DINNLTPEFFDHFKFYILLISNPCQPYTRLNKNFKE 188
>UniRef50_Q2IUT9 Cluster: DNA-cytosine methyltransferase; n=2;
Alphaproteobacteria|Rep: DNA-cytosine methyltransferase
- Rhodopseudomonas palustris (strain HaA2)
Length = 438
Score = 64.5 bits (150), Expect = 3e-09
Identities = 52/173 (30%), Positives = 88/173 (50%), Gaps = 7/173 (4%)
Frame = +3
Query: 105 ILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIE- 281
+++L+ G GG+ + ++ + VVA D + A Y+ NFPE T +I+S PI+
Sbjct: 8 VVDLFCGAGGLSQGFRDAGFR--VVAGSDNDPDAMATYRANFPEAAGITGDIRS-APIKE 64
Query: 282 --IEKYKIDTVLM-SPPCQPFT--RNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMEN 446
+E + TVL+ PPCQ F+ RN + + DPR + + F+D+L K + L+EN
Sbjct: 65 QLLEAARRATVLIGGPPCQAFSQVRNHTRMID-DPRNSLYREFVDVL-KQSLPPAFLIEN 122
Query: 447 VKGFECSTVRNLFVEKLTYCG-FVYQEFMLSPVSVGVPNSRLRYYCIAKRNNT 602
V G + VR+ L+ G + ++ GVP +R R + R+ +
Sbjct: 123 VTGMDQMGVRDQIASDLSLDGEYTVLPQVVDAADFGVPQTRKRLLFVGVRSRS 175
>UniRef50_A0ZH48 Cluster: Type II DNA modification enzyme; n=4;
Cyanobacteria|Rep: Type II DNA modification enzyme -
Nodularia spumigena CCY 9414
Length = 371
Score = 63.7 bits (148), Expect = 5e-09
Identities = 53/191 (27%), Positives = 87/191 (45%), Gaps = 4/191 (2%)
Frame = +3
Query: 60 FVNVSSTMEEK--MEHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFP 233
F+ + EK E+ +++L+ G GG+ + E+T G +I + Y++N
Sbjct: 10 FIETELQLPEKNHSEYLVIDLFGGCGGLALGF-EAT--GFQTIGYEILADSRATYEHN-- 64
Query: 234 ETLLFTKNIQSLTPIEIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDK 413
LL N +LTP ++ PPCQPF+ +G L D R + F FI +++
Sbjct: 65 --LLGVCNQVNLTPFSNLVEGAAVIIGGPPCQPFSVSGHQLGLKDSR-DGFPTFISAVER 121
Query: 414 LNTLQYILMENVKG--FECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIA 587
Q L ENV+G F V L G++ + +L+ GVP R R +C+A
Sbjct: 122 YRP-QIALFENVRGMLFRNKKYFEEIVLALQEIGYIVEWEILNAAHYGVPQKRERLFCVA 180
Query: 588 KRNNTWNFKRK 620
+ +W + K
Sbjct: 181 HK-GSWQWPEK 190
>UniRef50_Q5D6Y7 Cluster: BbvCI methyltransferase 1; n=1;
Brevibacillus brevis|Rep: BbvCI methyltransferase 1 -
Brevibacillus brevis (Bacillus brevis)
Length = 429
Score = 63.3 bits (147), Expect = 6e-09
Identities = 48/183 (26%), Positives = 94/183 (51%), Gaps = 13/183 (7%)
Frame = +3
Query: 63 VNVSSTMEEKMEHRI--LELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPE 236
+N+ S + ++ ++ ++L++G GG ++ + + V AI+++ A + ++ NFP
Sbjct: 5 LNMESETRQNIQKQLTAIDLFAGAGGFSLGFSMAGFR--VTHAIEVDKWAAETFEVNFPR 62
Query: 237 TLLFTKNIQSLTPIEIEKYKID----TVLMSPPCQPFTR-NGKNLDENDPRTNSFLYFID 401
T + T++IQ ++ EI+ ID V+ PPCQ F+ N N D DPR + F ++
Sbjct: 63 TKVVTRDIQQISDEEIKDI-IDERPLVVIGGPPCQGFSHSNVNNKDPKDPRNSLFQEYMR 121
Query: 402 ILDKLNTLQYILMENVKGF------ECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNS 563
+ +L + ++ENVKG + V ++ + + G+ +L+ + GVP
Sbjct: 122 FVAQLRP-KVCMIENVKGLLTTKTAKGELVIDIILREFESLGYNADFRVLNAANFGVPQF 180
Query: 564 RLR 572
R R
Sbjct: 181 RER 183
>UniRef50_A4AF81 Cluster: Cytosine-specific methyltransferase; n=1;
marine actinobacterium PHSC20C1|Rep: Cytosine-specific
methyltransferase - marine actinobacterium PHSC20C1
Length = 352
Score = 62.5 bits (145), Expect = 1e-08
Identities = 40/161 (24%), Positives = 85/161 (52%), Gaps = 5/161 (3%)
Frame = +3
Query: 105 ILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIEI 284
+++L++G GG+ + +++ + + V A++ +T A Y+ F ++++ +IQ +E
Sbjct: 1 MIDLFAGAGGLTAGFKKASARYETVRAVEWDTAAAASYEATFGPDIVYSGSIQDW--LES 58
Query: 285 EKY-KIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKGFE 461
EK + D ++ PPCQ F+ GK D D R + + ++ + + +Y ++ENV F
Sbjct: 59 EKVPRADLIVGGPPCQGFSTLGKQ-DAEDERNSLWEQYVRTILRAKP-KYFVVENVAAFA 116
Query: 462 CSTVRNLFVEKLTYCG----FVYQEFMLSPVSVGVPNSRLR 572
S+ + F+ + + G + +Q +L+ G P +R R
Sbjct: 117 KSSQYDQFLAETSEGGALEKYTFQHRVLNAADYGAPQARKR 157
>UniRef50_O34939 Cluster: YdiO protein; n=1; Bacillus subtilis|Rep:
YdiO protein - Bacillus subtilis
Length = 427
Score = 61.7 bits (143), Expect = 2e-08
Identities = 57/219 (26%), Positives = 96/219 (43%), Gaps = 19/219 (8%)
Frame = +3
Query: 105 ILELYSGIGGMHCA-WNESTIKG---KVVAAIDINTVANDVYKYNFPETLLFTKNIQSL- 269
I +L+SG GG+ W G + A D+N A VY+ NF ++I+
Sbjct: 86 IADLFSGCGGLSLGVWEACRALGINPRFSFACDLNEAALSVYEKNFSPDFSLNESIEKHI 145
Query: 270 -----TPIEIEKY-------KIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDK 413
P+ +E+ KID +L PPCQ + + DPR N+ L + + +
Sbjct: 146 NGELGAPLTVEEQRIKDKVKKIDFILAGPPCQGHSDLNNHTRRKDPR-NALLMRVSRVIE 204
Query: 414 LNTLQYILMENVKGF--ECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIA 587
L +L+ENV G + S F L G+ + E +L+ +GV +R RY+ A
Sbjct: 205 LFQPSSVLVENVPGIIHDKSGSFKEFKNHLKTQGYYFDEIVLNAEKLGVSQARRRYFIFA 264
Query: 588 KRNNTWNFKRKDELITCLPKTFAKPHCLKDIIENNVPDD 704
+ + + +E + + + + D++E NV DD
Sbjct: 265 SKTPVSSLNQINEFYSTNSRPIS--WAISDLVE-NVGDD 300
>UniRef50_A6QD13 Cluster: Cytosine-specific methyltransferase; n=1;
Sulfurovum sp. NBC37-1|Rep: Cytosine-specific
methyltransferase - Sulfurovum sp. (strain NBC37-1)
Length = 362
Score = 61.3 bits (142), Expect = 3e-08
Identities = 52/196 (26%), Positives = 88/196 (44%), Gaps = 5/196 (2%)
Frame = +3
Query: 108 LELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIE-I 284
++++SG GGM + I V A++ + A YK N P T + K+I+ + P++ +
Sbjct: 8 VDIFSGAGGMSIGAVMAGITP--VLAVEFDEHAAATYKANHPHTNVLAKDIKGVEPLKHV 65
Query: 285 EKYKIDTVLMSPPCQPFT-RNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKGFE 461
EK+ + PPCQ F+ N K + ++P F + ++ L + + ENV GF+
Sbjct: 66 EKHPF-LLFGGPPCQGFSVANTKTRNLDNPNNWMFREYCRFVEDLKP-DWFVFENVVGFK 123
Query: 462 CSTVRNLFVE---KLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNNTWNFKRKDELI 632
VE +L G+ +L+ GVP R R++ I R K + +
Sbjct: 124 SFDKGRFAVEVEKELKSLGYKTNSSVLNAADFGVPQYRNRFFIIGHRKEKGGIKFDFDSL 183
Query: 633 TCLPKTFAKPHCLKDI 680
PK LKD+
Sbjct: 184 EKKPKV-TVGEALKDL 198
>UniRef50_Q8VTD8 Cluster: Cytosine-specific methyltransferase; n=12;
Bacteria|Rep: Cytosine-specific methyltransferase -
Helicobacter pylori (Campylobacter pylori)
Length = 361
Score = 60.9 bits (141), Expect = 3e-08
Identities = 50/185 (27%), Positives = 87/185 (47%), Gaps = 12/185 (6%)
Frame = +3
Query: 93 MEHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLT 272
M ++IL+L+ G GG A E + + +D + A ++ N T +T
Sbjct: 1 MNYKILDLFCGAGGFS-AGLECLKEFDALIGLDCDKQALITFENNHKNA---TGICGDIT 56
Query: 273 PIEIEK--------YKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQ 428
IEI++ +I+ ++ PPCQ F+ GKNL DPR FL +I+I+ + +
Sbjct: 57 QIEIKEKVIKLAQTLEINMIIGGPPCQGFSNKGKNLGLKDPRNFLFLEYIEIVKAIKP-E 115
Query: 429 YILMENVKGFECSTVRNLFV----EKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRN 596
++ENVK S + F+ E+L G+ +L+ GVP +R R + +
Sbjct: 116 IFIIENVKNL-ISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASR 174
Query: 597 NTWNF 611
+++F
Sbjct: 175 FSFDF 179
>UniRef50_Q4C3L0 Cluster: C-5 cytosine-specific DNA methylase; n=1;
Crocosphaera watsonii WH 8501|Rep: C-5 cytosine-specific
DNA methylase - Crocosphaera watsonii
Length = 282
Score = 60.9 bits (141), Expect = 3e-08
Identities = 54/196 (27%), Positives = 93/196 (47%), Gaps = 10/196 (5%)
Frame = +3
Query: 81 MEEKMEHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPET--LLFTK 254
M + ++ +L+L+SG GG+ + ++ + V+A ID A ++ N P + +L
Sbjct: 1 MNKTNQYSLLDLFSGCGGLSYGFQQAGFE--VIAGIDNWKDALATFQKNHPTSQGILMDL 58
Query: 255 NIQSLTPIEIEKYK-IDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQY 431
+ S + I + K ID ++ PPCQ F+ +GK + +DPR + F+ ++D +
Sbjct: 59 AVASSSKISQQINKSIDVIVGGPPCQGFSISGKR-NPDDPRNLLYKSFLRVIDYFQP-KA 116
Query: 432 ILMENVKGFEC---STVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCI-AKRNN 599
I+MENV +R + L G+ Q +L GVP +R R + +N
Sbjct: 117 IVMENVPNMVSMAQGRIREQILTDLGRLGYQVQYKILLASDYGVPQNRRRVIFVGVPKNY 176
Query: 600 TWNFKRKD---ELITC 638
+NF D ITC
Sbjct: 177 EFNFPIGDFTENKITC 192
>UniRef50_A0YV45 Cluster: Cytosine specific DNA methyltransferase;
n=1; Lyngbya sp. PCC 8106|Rep: Cytosine specific DNA
methyltransferase - Lyngbya sp. PCC 8106
Length = 399
Score = 60.9 bits (141), Expect = 3e-08
Identities = 53/176 (30%), Positives = 87/176 (49%), Gaps = 10/176 (5%)
Frame = +3
Query: 102 RILELYSGIGGMHCAWN-ESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPI 278
+ L+L+ G+GG+ +W +ST K + + A+D A ++Y+ N P+T L ++ +
Sbjct: 4 KALDLFCGMGGL--SWGLKSTRKIEPIWAVDNCQTALNLYELNLPKTNLLNLDLSRQLDV 61
Query: 279 E--IEKYK----IDTVLMSPPCQPFT--RNGKNLDENDPRTNSFLYFIDILDKLNTLQYI 434
IEK ID ++ PCQ FT RNG++L N P N + F I+ LN + +I
Sbjct: 62 TSLIEKINFNGGIDLMVGGSPCQGFTQIRNGQDLTSN-PNNNFAITFAKIVKALNPIAFI 120
Query: 435 LMENVKGFECSTV-RNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNN 599
ENV E V ++ E + +L V+ G P+ R R + + R+N
Sbjct: 121 -YENVPQIETYKVFKDFLAEFERDKKYKISYRVLEAVNFGNPSRRSRLFVVGFRSN 175
>UniRef50_A0H0W8 Cluster: DNA-cytosine methyltransferase; n=1;
Chloroflexus aggregans DSM 9485|Rep: DNA-cytosine
methyltransferase - Chloroflexus aggregans DSM 9485
Length = 362
Score = 60.9 bits (141), Expect = 3e-08
Identities = 42/173 (24%), Positives = 84/173 (48%), Gaps = 8/173 (4%)
Frame = +3
Query: 81 MEEKMEHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNI 260
M+ + +++L++G GG+ + V+AA++ + V Y N PE L+ ++I
Sbjct: 1 MKPDVTPTMIDLFAGCGGVTTGFKAKGFN--VLAAVEFDPVTAQTYHLNHPEVALYVQDI 58
Query: 261 QSLTPIE------IEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNT 422
+ ++P E +E+ + + + PCQPF++ + D R + L + ++ +
Sbjct: 59 RDISPNEMMARCRLERGHLTVLSVCAPCQPFSKQNR-YRHADERASLILETVRFVEAFHP 117
Query: 423 LQYILMENVKGF-ECSTVRNLFVEKLTYCGFVYQE-FMLSPVSVGVPNSRLRY 575
L ++ +ENV G + S + + V L G+ E ++ V GVP R R+
Sbjct: 118 L-FLFIENVPGLRQHSDILDTLVGDLEKLGYTMSEPAIVDAVKYGVPQFRRRF 169
>UniRef50_P50192 Cluster: Modification methylase HphIA (EC 2.1.1.37)
(Cytosine-specific methyltransferase HphIA) (M.HphIA)
(M.Hphi(C)); n=7; Bacteria|Rep: Modification methylase
HphIA (EC 2.1.1.37) (Cytosine-specific methyltransferase
HphIA) (M.HphIA) (M.Hphi(C)) - Haemophilus
parahaemolyticus
Length = 372
Score = 60.9 bits (141), Expect = 3e-08
Identities = 43/172 (25%), Positives = 83/172 (48%), Gaps = 9/172 (5%)
Frame = +3
Query: 108 LELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIEIE 287
++L+SG GG ++ + + +++I D Y+ NFP+ + +++ +L+ +
Sbjct: 48 IDLFSGAGGFSLGFDRAGFHQ--LLSVEIEPHYCDTYRANFPDHQVLQQDLTTLSDDNLL 105
Query: 288 KY----KIDTVLMSPPCQPFTRNGK--NLDENDPRTNSFLYFIDILDKLNTLQYILMENV 449
++ K+D V+ PPCQ F+ GK +DPR + F F+ ++ KL ++ +MENV
Sbjct: 106 RHINHRKVDVVIGGPPCQGFSMAGKIGRTFADDPRNHLFKEFVRVV-KLTQPKFFVMENV 164
Query: 450 KGF---ECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRN 596
R E+ G+ + +L+ GVP R R I +++
Sbjct: 165 ARLFTHNSGKTRAEITEQFERLGYKVKCKVLNAADFGVPQLRSRIVFIGRKD 216
>UniRef50_P34882 Cluster: Modification methylase AquI subunit alpha;
n=1; Synechococcus sp. PCC 7002|Rep: Modification
methylase AquI subunit alpha - Synechococcus sp. (strain
PCC 7002) (Agmenellum quadruplicatum)
Length = 248
Score = 60.9 bits (141), Expect = 3e-08
Identities = 49/191 (25%), Positives = 87/191 (45%), Gaps = 18/191 (9%)
Frame = +3
Query: 93 MEHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLT 272
ME +++ L+SG GGM ++ + V A++ + + + N P+T + +I S+T
Sbjct: 1 MEKKLISLFSGAGGMDIGFHAAGFSTAV--AVEQDPSCCNTLRLNMPDTPVIEGDITSIT 58
Query: 273 P------IEIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYI 434
++ +ID V+ PPCQ F+ GK + +DPR L F+ ++ + ++
Sbjct: 59 TQVILEAAKVNPLEIDLVIGGPPCQSFSLAGKRMGMDDPRGMLVLEFLRVVREALPKCFV 118
Query: 435 LMENVKGF-------ECSTVRNLFVEKLTYCGFVYQ----EFMLSPVSVGVPNSRLRYYC 581
MENVKG + + + Y G Y+ +L+ GVP R R +
Sbjct: 119 -MENVKGMINWSKGKALEAIMTEASQPIKYAGKEYKYAVSYHVLNAADFGVPQFRERVFI 177
Query: 582 IAKR-NNTWNF 611
+ R T+ F
Sbjct: 178 VGNRLGKTFQF 188
>UniRef50_Q3M126 Cluster: C-5 cytosine-specific DNA methylase; n=2;
Nostocaceae|Rep: C-5 cytosine-specific DNA methylase -
Anabaena variabilis (strain ATCC 29413 / PCC 7937)
Length = 415
Score = 60.5 bits (140), Expect = 4e-08
Identities = 51/177 (28%), Positives = 84/177 (47%), Gaps = 15/177 (8%)
Frame = +3
Query: 108 LELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIEIE 287
+ L+SG+GG + + + + AID N + Y++NFP + K+I+ +T EI
Sbjct: 12 ISLFSGVGGFDLGFEAAGFE--IAIAIDNNPIVLATYQHNFPHATVLCKDIREVTAQEIR 69
Query: 288 -----KY-----KIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYIL 437
KY +I TV PPCQ F+ G + D R + F+ ++ +LN L I
Sbjct: 70 ACIQAKYVDWDGEIHTVFGGPPCQGFSVAGLQ-NVEDERNSLVGEFVRLVLELNPLAAI- 127
Query: 438 MENVKGFE-----CSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKR 593
MENV G E C T ++ + + ++ L+ GVP +R R + +A +
Sbjct: 128 MENVPGIENQKFGCITAN---LQAVLEEHYFLSKWNLTASDYGVPQARKRVFFVASK 181
>UniRef50_Q4C4N0 Cluster: C-5 cytosine-specific DNA methylase; n=1;
Crocosphaera watsonii WH 8501|Rep: C-5 cytosine-specific
DNA methylase - Crocosphaera watsonii
Length = 226
Score = 60.5 bits (140), Expect = 4e-08
Identities = 66/238 (27%), Positives = 103/238 (43%), Gaps = 13/238 (5%)
Frame = +3
Query: 60 FVNVSSTMEEKMEHRILELYSGIGGM---------HCAWNESTIKGKVVAAIDINTVAND 212
F + S++ +E + ++L+ GIGG H + E IK V + DI+ A
Sbjct: 3 FTSNSNSKNSNLELKYIDLFCGIGGFRIALELVCSHYKFKEHKIKPICVFSSDIDADAQK 62
Query: 213 VYKYNFPETLLFTKNIQSLTPIEIEKYKIDTVLMSP-PCQPFTRNGKNLDENDPRTNSFL 389
Y+ NF + K +T I +E +L++ PCQ F+ GK D R F
Sbjct: 63 NYEANFKD-----KPQGDITQIPVELIPNHNLLLAGFPCQTFSICGKLQGFEDTRGTLFF 117
Query: 390 YFIDILDKLNTLQYILMENVK---GFECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPN 560
+LD +IL ENVK G N +E L+ G+ + +L+ + G+P
Sbjct: 118 DIARVLDYHKPYAFIL-ENVKQLVGHNKGKTLNTILEILSDLGYYTEYKVLNALDFGLPQ 176
Query: 561 SRLRYYCIAKRNNTWNFKRKDELITCLPKTFAKPHCLKDIIENNVPDDYLVPDKMLRK 734
R R + I R + NF K P KP L +IIE +V + Y + + +K
Sbjct: 177 KRERIFIIGLR-DPLNFTFKK------PNISRKP--LSEIIEKSVSEFYYASEHIQKK 225
>UniRef50_Q10VV2 Cluster: Cytosine-specific methyltransferase; n=3;
Bacteria|Rep: Cytosine-specific methyltransferase -
Trichodesmium erythraeum (strain IMS101)
Length = 413
Score = 60.1 bits (139), Expect = 6e-08
Identities = 47/186 (25%), Positives = 87/186 (46%), Gaps = 8/186 (4%)
Frame = +3
Query: 102 RILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIE 281
+ +EL++GIGG + IK + A D++ + VY+ NF + + +I + +E
Sbjct: 30 KAIELFAGIGGFCLGMRAANIK--TIWANDVSKLCCQVYQSNFGSSSIVLDDINKINLLE 87
Query: 282 IEKYKIDTVLMSPPCQPFTRNGKNLDENDP-RTNSFLYFIDILDKLNTLQYILMENVK-- 452
I ++ I T PCQPF++ GK + D R F I+I+ + +Y L+ENVK
Sbjct: 88 IPEHDILTAGF--PCQPFSQAGKKMGIRDRLRGTLFERIIEII-QAKKPKYFLLENVKRI 144
Query: 453 -GFECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYY----CIAKRNNTWNFKR 617
E + + L + + +++P++ +P +R R + CI T + +
Sbjct: 145 LTMEKGYHFRIILNALASLDYFIEWRIINPINFSIPQNRDRIFIFGTCIKSTQKTLDLEN 204
Query: 618 KDELIT 635
+T
Sbjct: 205 LSVFLT 210
>UniRef50_Q8YMV9 Cluster: Cytosine-specific methyltransferase; n=1;
Nostoc sp. PCC 7120|Rep: Cytosine-specific
methyltransferase - Anabaena sp. (strain PCC 7120)
Length = 414
Score = 59.7 bits (138), Expect = 8e-08
Identities = 44/182 (24%), Positives = 86/182 (47%), Gaps = 11/182 (6%)
Frame = +3
Query: 81 MEEKMEHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNI 260
M ++ + ++L++G GG + + V +++I+T A D +YN P++ + +I
Sbjct: 1 MVQREQPIAIDLFAGAGGFGLGFEMAGFS--VPLSVEIDTWACDTLRYNRPDSTVIQNDI 58
Query: 261 QSL-TPIEIEK---YKIDTVLMSPPCQPFTRNG-KNLDENDPRTNSFLYFIDILDKLNTL 425
+ T +++ +K D ++ PPCQ F+ G D DPR F+ F + L
Sbjct: 59 GNFSTENDVKNICNFKPDIIIGGPPCQGFSIAGPAQKDPKDPRNGLFINFAQWIKFLEPK 118
Query: 426 QYILMENVKGF------ECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIA 587
++ MENVKG E V ++ + G+ + ++L+ G+P R R + +
Sbjct: 119 AFV-MENVKGLLSRKNAEGFKVIDIIKKTFEELGYFVEVWVLNAAEYGIPQIRERIFIVG 177
Query: 588 KR 593
+
Sbjct: 178 NK 179
>UniRef50_Q8X8S5 Cluster: Cytosine-specific methyltransferase; n=1;
Escherichia coli O157:H7|Rep: Cytosine-specific
methyltransferase - Escherichia coli O157:H7
Length = 383
Score = 59.7 bits (138), Expect = 8e-08
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 9/208 (4%)
Frame = +3
Query: 105 ILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIEI 284
+++L+SG+GG+ + K+ A++I+ A + + NFP +L +++ SL EI
Sbjct: 3 VIDLFSGVGGLSLGAARAGFDVKM--AVEIDQHAINTHAINFPRSLHVQEDV-SLLNAEI 59
Query: 285 EK--YK----IDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMEN 446
K +K ID ++ PPCQ F+ GK + +D R +++F ++ +L L + L EN
Sbjct: 60 IKGFFKNDMPIDGIIGGPPCQGFSSIGKG-NPDDSRNQLYMHFYRLVSELQPL-FFLAEN 117
Query: 447 VKGF---ECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNNTWNFKR 617
V G + S +RN ++ + + G P R RY+ I + +
Sbjct: 118 VPGIMQEKYSGIRNKAFNLVSGDYDILDPIKVKASDYGAPTIRTRYFFIGVKKSL-KLDI 176
Query: 618 KDELITCLPKTFAKPHCLKDIIENNVPD 701
DE+ +PK P +KD + +PD
Sbjct: 177 SDEVF--MPK-MIDPVTVKDAL-YGLPD 200
>UniRef50_P52311 Cluster: Modification methylase XorII; n=6;
Bacteria|Rep: Modification methylase XorII - Xanthomonas
oryzae pv. oryzae
Length = 424
Score = 59.7 bits (138), Expect = 8e-08
Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 11/173 (6%)
Frame = +3
Query: 108 LELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIE-- 281
++L++G GG+ + ++ +VAA+DI+ + +K+NFP+ K++ +T E
Sbjct: 7 IDLFAGAGGLSLGFEQAGFD--LVAAVDIDPIHCAAHKFNFPKCATVCKSVVDVTGDELR 64
Query: 282 ----IEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENV 449
I K ID V+ PCQ F+ GK +D R +++ ++ +L +Y + ENV
Sbjct: 65 RIAGIGKRDIDIVIGGAPCQGFSLIGKRA-LDDSRNQLVHHYVRVVMELKP-KYFVFENV 122
Query: 450 KGFECSTVRNLF---VEKLTYCGF-VYQEF-MLSPVSVGVPNSRLRYYCIAKR 593
KG R +E G+ V ++ +L+ GVP R R + R
Sbjct: 123 KGLTVGKHRQFLKEVIEAFQNGGYDVVTDYRVLNAADYGVPQDRRRLILMGAR 175
>UniRef50_A3FQI8 Cluster: DNA methyltransferase PMT1-like protein;
n=2; Cryptosporidium|Rep: DNA methyltransferase
PMT1-like protein - Cryptosporidium parvum Iowa II
Length = 303
Score = 59.3 bits (137), Expect = 1e-07
Identities = 36/93 (38%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Frame = +3
Query: 438 MENVKGFECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNNTWN-FK 614
+ENV FE S ++ L+ F EFMLSP +GVPN+R+RYYC++ R ++ N K
Sbjct: 16 VENVANFETSNTHKEMIKMLSKLNFCTFEFMLSPTLIGVPNTRVRYYCVSVRKDSANLIK 75
Query: 615 RKDEL-ITCLPK---TFAKPHCLKDIIENNVPD 701
+ +EL I+ K + A L IE N D
Sbjct: 76 QLNELKISIYQKNCQSIASNVLLSHSIEKNTED 108
>UniRef50_Q6UQ63 Cluster: Cytosine-specific methyltransferase; n=1;
Geobacillus stearothermophilus|Rep: Cytosine-specific
methyltransferase - Bacillus stearothermophilus
(Geobacillus stearothermophilus)
Length = 1007
Score = 58.8 bits (136), Expect = 1e-07
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 9/173 (5%)
Frame = +3
Query: 108 LELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNI------QSL 269
++L+ G GG+ + E+ I+ V DI A K N PE + +I + +
Sbjct: 776 IDLFCGAGGLTAGFKEAGIQS--VLCNDIEESACITLKINNPEIKVLCGDISQHETKEHI 833
Query: 270 TPIEIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENV 449
+ I + +D + PPCQ F+ G L + DPR F FI+I+ ++ + I+ ENV
Sbjct: 834 VNVAINE-DVDIICGGPPCQGFSMAGLRLTD-DPRNQLFKEFIEIVSRVKP-KVIVFENV 890
Query: 450 KG---FECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNN 599
+G F+ V +E + G+ + L VP R R + I R++
Sbjct: 891 EGILSFQSGKVYRAILEMFSEIGYFTEGRTLMSSDYAVPQKRKRVFIICTRDD 943
>UniRef50_Q0KRI5 Cluster: Cytosine-specific methyltransferase; n=2;
Gammaproteobacteria|Rep: Cytosine-specific
methyltransferase - Shewanella baltica OS195
Length = 385
Score = 58.8 bits (136), Expect = 1e-07
Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 16/182 (8%)
Frame = +3
Query: 102 RILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLF-TKNIQS---- 266
+ ++L+SG GG+ A ++ I V+AAI+++T A+ Y+ N E L TK I
Sbjct: 2 KAIDLFSGAGGLSLAAHQCGID--VIAAIELDTAASITYRANLIEQLKAPTKLINGDINE 59
Query: 267 ------LTPIEIEKYKIDTVLMSPPCQPF-TRNGKNLDENDPRTNSFLYFIDILDKLNTL 425
+ ++++ +++ +L PPCQ F T N +DPR L + D +D L
Sbjct: 60 VDLPALMKELKLKSGELELLLGGPPCQGFSTHRINNAGIDDPRNQLLLKYFDFVDGLQPK 119
Query: 426 QYILMENVKGFECSTVRNLFVEKL----TYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKR 593
+ L+ENV G N + L T+ ++ +L+ GVP +R R + R
Sbjct: 120 AF-LIENVAGLLWKRHENYLNQLLALAETHGYTIHFCGILNAKDYGVPQNRKRVFIFGTR 178
Query: 594 NN 599
N+
Sbjct: 179 ND 180
>UniRef50_P19888 Cluster: Modification methylase BanI; n=5;
Bacteria|Rep: Modification methylase BanI - Bacillus
aneurinolyticus
Length = 428
Score = 58.4 bits (135), Expect = 2e-07
Identities = 57/231 (24%), Positives = 107/231 (46%), Gaps = 19/231 (8%)
Frame = +3
Query: 93 MEHRILELYSGIGGMHCAWNEST----IKGKVVAAIDINTVANDVYKYNFPETLLFTKNI 260
M+ + ++L++GIGG+ + + ++ + V + +I+ A + Y NF E +I
Sbjct: 1 MKIKFVDLFAGIGGIRIGFERAAKRFELETECVLSSEIDKKACETYALNFKEEP--QGDI 58
Query: 261 QSLTPIEIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILM 440
+T + D +L PCQPF+ GK D R F + ++ + + N + L+
Sbjct: 59 HEITSFP----EFDFLLAGFPCQPFSYAGKQQGFGDTRGTLF-FEVERVLRDNRPKAFLL 113
Query: 441 ENVKGF---ECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIA------KR 593
ENV+G + + KL G+ +L+ + GVP +R+R Y + K
Sbjct: 114 ENVRGLVTHDKGRTLKTIISKLEELGYGVSYLLLNSSTFGVPQNRVRIYILGILGSKPKL 173
Query: 594 NNTWN------FKRKDELITCLPKTFAKPHCLKDIIENNVPDDYLVPDKML 728
T N K K+E I+ +++A +KDI+E++ + Y D+ +
Sbjct: 174 TLTSNVGAADSHKYKNEQISLFDESYA---TVKDILEDSPSEKYRCSDEFI 221
>UniRef50_Q5D6Y6 Cluster: BbvCI methyltransferase 2; n=1;
Brevibacillus brevis|Rep: BbvCI methyltransferase 2 -
Brevibacillus brevis (Bacillus brevis)
Length = 396
Score = 58.0 bits (134), Expect = 2e-07
Identities = 42/178 (23%), Positives = 89/178 (50%), Gaps = 10/178 (5%)
Frame = +3
Query: 93 MEHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSL- 269
M+ L++++G GG ++ +V +A++I++ A + Y++N L T++I +
Sbjct: 1 MKFVALDIFAGCGGFSSGLIQAG--HEVTSALEIDSWAAETYQFNHRNVNLLTEDITKVD 58
Query: 270 -TPIEIE-KYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLY-FIDILDKLNTLQYILM 440
T ++ K +++ V+ PPCQ F+ +G + N+ + +I ++ + +Y ++
Sbjct: 59 STYFKVNFKDRVNLVVGGPPCQGFSVSGPRQYGVYKKENALVAEYIRVIKAVEP-EYFIL 117
Query: 441 ENVKGFECSTVR------NLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRN 596
ENV+GF +T+ N + +L G+ +L GVP R R + + R+
Sbjct: 118 ENVRGFTTATIEGRIKALNFLLAELREIGYHVYHDVLQAADYGVPQLRSRLFVVGSRH 175
>UniRef50_Q59380 Cluster: Eco29kIM; n=5; Bacteria|Rep: Eco29kIM -
Escherichia coli
Length = 382
Score = 58.0 bits (134), Expect = 2e-07
Identities = 44/137 (32%), Positives = 70/137 (51%), Gaps = 3/137 (2%)
Frame = +3
Query: 102 RILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIE 281
R LE++SG GG+ A + V +++N A D + NF E +F +I++
Sbjct: 2 RSLEIFSGAGGL--AKGLELAGFQHVGFVELNKHACDSLRLNFDEEKVFQGDIKNYDLSS 59
Query: 282 IEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKGFE 461
++K ID V PPCQPF+ GK+ +D R + F + I ++ L +I ENVKG
Sbjct: 60 LDK--IDIVAGGPPCQPFSLGGKHKAHDDSR-DMFPFAIKAIEVLQPKAFI-FENVKGLL 115
Query: 462 CSTVRNLF---VEKLTY 503
+ + F + +LTY
Sbjct: 116 RKSFADYFEYIILRLTY 132
>UniRef50_A4X2E9 Cluster: Cytosine-specific methyltransferase; n=1;
Salinispora tropica CNB-440|Rep: Cytosine-specific
methyltransferase - Salinispora tropica CNB-440
Length = 652
Score = 58.0 bits (134), Expect = 2e-07
Identities = 47/197 (23%), Positives = 94/197 (47%), Gaps = 18/197 (9%)
Frame = +3
Query: 60 FVNVSSTMEEKMEHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPET 239
F+ + E+ E +L+SG GG+ E+ + VV A D + + + +++++P
Sbjct: 38 FLRFAKACRERGERLAADLFSGAGGLSLGLTEAGFR--VVLAADRDPESVETHRHHYPGL 95
Query: 240 LLF-----TKNIQSLTPIEIEKYKIDTVLMSPPCQPFTRNGKNL----------DENDPR 374
L + NI+ + + +++ I+ + PPCQPF+R G++L +D R
Sbjct: 96 TLDYDLGESANIRRIAAL-VKEAGIELLTGGPPCQPFSRAGRSLIRHQVRHGLRPAHDER 154
Query: 375 TNSFLYFIDILDKLNTLQYILMENVKGFECST---VRNLFVEKLTYCGFVYQEFMLSPVS 545
+ + F++++ +L T ++MENV + V +L G+ +E ++ +
Sbjct: 155 RDLWHSFLEVI-QLATPAAVIMENVPDMALDREMFILRTMVHELESIGYAVEEQVVDTLR 213
Query: 546 VGVPNSRLRYYCIAKRN 596
GVP R R +A R+
Sbjct: 214 YGVPQFRQRLILVALRD 230
>UniRef50_Q9YAD7 Cluster: Cytosine-specific DNA methylase; n=4;
Thermoprotei|Rep: Cytosine-specific DNA methylase -
Aeropyrum pernix
Length = 327
Score = 58.0 bits (134), Expect = 2e-07
Identities = 48/170 (28%), Positives = 79/170 (46%), Gaps = 14/170 (8%)
Frame = +3
Query: 111 ELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIEIEK 290
++++G GG + E+ + +V AID A YK NFP T +++ + EI
Sbjct: 9 DVFAGGGGFSRGFEEAGFRVRV--AIDNYPPAARTYKANFPHTAFIADDVKEVGLEEISS 66
Query: 291 Y------KIDTVLMSPPCQPFT-----RNGKNLDE--NDPRTNSFLYFIDILDKLNTLQY 431
++D V+ SPPC+PFT R + LD DP FL+ I ++ L ++
Sbjct: 67 VSGLSPGEVDVVIASPPCEPFTGANPRRMERPLDRLYRDPAGQLFLHAIRLIGLLKP-RF 125
Query: 432 ILMENVKGFECSTVRNLFVEKLTYCGFVYQEF-MLSPVSVGVPNSRLRYY 578
++ENV G + +L+ G+ F +L G P+ RLR +
Sbjct: 126 FVIENVPGIAHPEIERAVRMELSKAGYRRVYFNLLRAEEHGTPSRRLRVF 175
>UniRef50_Q6HMN7 Cluster: Modification methylase HpaII; n=1;
Bacillus thuringiensis serovar konkukian|Rep:
Modification methylase HpaII - Bacillus thuringiensis
subsp. konkukian
Length = 373
Score = 57.6 bits (133), Expect = 3e-07
Identities = 62/238 (26%), Positives = 113/238 (47%), Gaps = 26/238 (10%)
Frame = +3
Query: 93 MEHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLT 272
M+++ L+L++GIGG+ + E T + + V + +I+ A Y++ + E KN +
Sbjct: 1 MKYKTLDLFAGIGGIRRGF-ELTGRFENVLSAEIDQYACQTYEHLYSEN---PKNDVTSA 56
Query: 273 PIE--IEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYF--IDILDKLNTLQYILM 440
+ +EK D +L PCQ F+ GK D +T L+F DI+++ ++L
Sbjct: 57 EFKEKVEKLTYDVLLGGFPCQAFSTAGKKEGFRD-KTRGTLFFDVADIIERTRPKAFLL- 114
Query: 441 ENV-------KGFECSTVRNLFVEKLTY--CG--------FVY--QEFMLSPVSVGVPNS 563
ENV KG T+ V +L Y G +Y + F+L+ + GVP +
Sbjct: 115 ENVEGLIRHKKGETFKTILETLVIELDYKVIGVEKGENGELIYDPRSFLLNSRNFGVPQN 174
Query: 564 RLRYYCIAKRNNTWNFKRKDELITCLPKTFAKP---HCLKDIIENNVPDDYLVPDKML 728
R R Y + + K + + LPK+ ++ ++D++E+NV + Y + + L
Sbjct: 175 RPRIYIVGFNQRLYRDKIESMPLFTLPKSRSRKKIYDSVRDVLEDNVGEKYYLSEGYL 232
>UniRef50_Q83XX0 Cluster: Cytosine-specific methyltransferase; n=1;
Arthrobacter sp. S|Rep: Cytosine-specific
methyltransferase - Arthrobacter sp. S
Length = 390
Score = 57.2 bits (132), Expect = 4e-07
Identities = 46/172 (26%), Positives = 86/172 (50%), Gaps = 9/172 (5%)
Frame = +3
Query: 108 LELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYN--FPETLLFTKNIQSLT-PI 278
+EL++G GG+ ++ ++ +D N + Y YN + + +++ +L P
Sbjct: 7 VELFAGCGGLSTGLLDAGYDVRL--GVDNNAPSLVAYDYNHAYRGSKSLLRDVSALRGPE 64
Query: 279 EIEKYKIDTV-LMS--PPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENV 449
+E +D++ ++S PPCQPF+ GK L +DPR + F+ I+D++ + ++ ENV
Sbjct: 65 LLEAAGVDSIDVLSGGPPCQPFSIAGKRLGLDDPRGHLIAEFVRIVDEVRP-KAVVFENV 123
Query: 450 KGFECS---TVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRN 596
+ S V + L G+ + +L+ GVP +R R IA R+
Sbjct: 124 PALQTSHNGDVVRATTDALEQLGYGVRRAILNAADWGVPQARKRLILIAVRD 175
>UniRef50_A4XZL7 Cluster: Cytosine-specific methyltransferase; n=1;
Pseudomonas mendocina ymp|Rep: Cytosine-specific
methyltransferase - Pseudomonas mendocina ymp
Length = 365
Score = 57.2 bits (132), Expect = 4e-07
Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 6/164 (3%)
Frame = +3
Query: 105 ILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIEI 284
+L+L+SG GG+ ++ ++ A+DI+ + + + NFP ++ +LT +
Sbjct: 4 LLDLFSGCGGLTLGAKQAGFTTEL--AVDIDPILSSSFGLNFPSVPFLNADVTTLTSDRL 61
Query: 285 EKYK---IDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKG 455
+ +D V+ PPCQ F+ G+ L +DPR + F I+ + + +MENV G
Sbjct: 62 KALLPSGVDGVIGGPPCQAFSGMGRGL-ADDPRRSLLGEFFRIVATVKP-AFFMMENVPG 119
Query: 456 FECSTVRNLFVEKLTYCGFVYQ---EFMLSPVSVGVPNSRLRYY 578
R + E + G +Q +L G P R R +
Sbjct: 120 LVFPANRPVLEEAIASLGGKWQIVGPVVLDASDFGAPTKRRRVF 163
>UniRef50_Q8XTV8 Cluster: Cytosine-specific methyltransferase; n=2;
Proteobacteria|Rep: Cytosine-specific methyltransferase
- Ralstonia solanacearum (Pseudomonas solanacearum)
Length = 364
Score = 56.8 bits (131), Expect = 5e-07
Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 12/168 (7%)
Frame = +3
Query: 105 ILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLL-FTKNIQSLTPIE 281
+L L+ G GG+ + ++ + V A DI + + Y N + + ++I+ + P
Sbjct: 2 LLSLFCGAGGLDKGFEQAGFE--VGLAFDIRPDSIESYNRNRRAPIRGYCRDIRDIKPKA 59
Query: 282 I-----EKYKIDTVLMSPPCQPFTRNGKNLDENDPRTN-SFLY--FIDILDKLNTLQYIL 437
+ E ++ ++ PPCQ F+R K+ +DPR F+Y I L+K + + + +
Sbjct: 60 LDELFGETFRPSGIIGGPPCQSFSRANKSQSNDDPRHELPFVYADLIRTLNKRSPVPFFV 119
Query: 438 MENVKGFECSTVRNLFVE---KLTYCGFVYQEFMLSPVSVGVPNSRLR 572
ENV G FVE +L GF QE +L+ + VP +R R
Sbjct: 120 FENVVGLTEEPHNEKFVELKKRLGKIGFSVQEAILNAANYSVPQNRER 167
>UniRef50_Q307B4 Cluster: Cytosine-specific methyltransferase; n=2;
Oscillatoriales|Rep: Cytosine-specific methyltransferase
- Spirulina platensis
Length = 390
Score = 56.8 bits (131), Expect = 5e-07
Identities = 44/169 (26%), Positives = 75/169 (44%), Gaps = 7/169 (4%)
Frame = +3
Query: 108 LELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIEIE 287
++L+SG GGM C + + + +D + A ++ N P+ +++ ++ +I
Sbjct: 10 IDLFSGAGGMSCGLEMAGF--ECLLGVDFDKSAIQTFQNNHPQAETICGDLREISTEQIR 67
Query: 288 KY----KIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKG 455
+ I+ + PPCQ F+ G N + D R FL F+ +++L YI++ENV G
Sbjct: 68 ELIGDRHINLICGGPPCQGFSTIGTN-NNLDKRNFLFLEFLRFVEQLKP-DYIIIENVTG 125
Query: 456 FECSTVRNLFVEKLT---YCGFVYQEFMLSPVSVGVPNSRLRYYCIAKR 593
N LT G+ +LS GVP R R + R
Sbjct: 126 LLSRKNENTLTSILTCLQNIGYTVDVRVLSAHHYGVPEKRRRTIFLGNR 174
>UniRef50_Q1J4T9 Cluster: Type II restriction-modification system
methylation subunit; n=3; Firmicutes|Rep: Type II
restriction-modification system methylation subunit -
Streptococcus pyogenes serotype M4 (strain MGAS10750)
Length = 321
Score = 56.8 bits (131), Expect = 5e-07
Identities = 55/219 (25%), Positives = 105/219 (47%), Gaps = 8/219 (3%)
Frame = +3
Query: 102 RILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIE 281
+ILEL+ GIG + A+ I +VV ++I+ Y + E +S+ +
Sbjct: 5 KILELFGGIGAIRKAFINLKIPYEVVDYVEIDRACVKSYNALYGEDY----KPKSVVEYK 60
Query: 282 IEKYKIDTVLMSPPCQPFTRNGKNLD--ENDPRTNSFLY-FIDILDKL-NTLQYILMENV 449
KID V+ PCQ F+R GK +N +S L+ I I+ ++ + ++I+ ENV
Sbjct: 61 APNAKIDLVMHGSPCQDFSRIGKKKGGVKNSGTRSSLLFETIRIIKEMKDKPKWIIWENV 120
Query: 450 KGFECSTVRN---LFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRN-NTWNFKR 617
KG +R+ +++++L G+ + +L+ + G+P R R + ++ N ++F +
Sbjct: 121 KGVLDRNMRDSFFIYLKELENLGYESKYEILNAMDFGIPQKRERIFVVSCLGANNFSFDK 180
Query: 618 KDELITCLPKTFAKPHCLKDIIENNVPDDYLVPDKMLRK 734
L + +P L + +E NV + Y + + K
Sbjct: 181 -------LERKETRP--LSEFLEKNVSELYTMTQPYMLK 210
>UniRef50_Q20YF4 Cluster: DNA-cytosine methyltransferase; n=1;
Rhodopseudomonas palustris BisB18|Rep: DNA-cytosine
methyltransferase - Rhodopseudomonas palustris (strain
BisB18)
Length = 374
Score = 56.4 bits (130), Expect = 7e-07
Identities = 45/169 (26%), Positives = 77/169 (45%), Gaps = 7/169 (4%)
Frame = +3
Query: 108 LELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIEIE 287
++L+SG G + T +VV+A+++ A YK N PE + ++++++ +
Sbjct: 19 IDLFSGGGALTLGLK--TAGFRVVSAVEVEQHAFATYKANHPEVFAYKQDVRTVDGQSLS 76
Query: 288 KY----KIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKG 455
+ KID + PPCQ FT DPR N ++ ++ + ++MENV
Sbjct: 77 MHAPRRKIDLLAGCPPCQGFTSLTSKWRRQDPRNNLVREMSRLVQEIRP-RAVMMENVPR 135
Query: 456 FECSTVRNL---FVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKR 593
ST R+L F+ L G+ +L G P +R R +A R
Sbjct: 136 L-ASTGRDLLDGFIVDLKKAGYRVAWDVLQVADYGTPQARKRLVLLAGR 183
>UniRef50_Q0T971 Cluster: Modification methylase; n=3; Escherichia
coli|Rep: Modification methylase - Escherichia coli
O6:K15:H31 (strain 536 / UPEC)
Length = 348
Score = 56.4 bits (130), Expect = 7e-07
Identities = 44/174 (25%), Positives = 79/174 (45%), Gaps = 11/174 (6%)
Frame = +3
Query: 105 ILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIEI 284
+++ + G GG ++ + +DI+ A++ +K NFP+ +I+ + P +I
Sbjct: 3 VIDFFCGCGGASEGLRQAGFD--IELGLDIDQQASETFKANFPDAKFIQDDIRKIEPQDI 60
Query: 285 E-----KYKIDTVLMS-PPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMEN 446
K K +L + PCQPF++ KN +D R N + +L +YI++EN
Sbjct: 61 SDIIDIKAKRPLLLSACAPCQPFSQQNKNKTSDDSRRNLLNETHRFIREL-LPEYIMLEN 119
Query: 447 VKGF-----ECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKR 593
V G E F++ L + Y F+ + + G+P R R +A R
Sbjct: 120 VPGMQKIDEEKEGPFQEFIKLLKELEYNYISFIANAENYGIPQRRKRLVLLASR 173
>UniRef50_A4QCE7 Cluster: Putative uncharacterized protein; n=1;
Corynebacterium glutamicum R|Rep: Putative
uncharacterized protein - Corynebacterium glutamicum
(strain R)
Length = 331
Score = 56.0 bits (129), Expect = 9e-07
Identities = 47/155 (30%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Frame = +3
Query: 174 VVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIEI------EKYKIDTVLMSPPCQPF 335
+ AA++ + V ++YNFPET+ F +++Q+L+ EI + I V+ PCQ F
Sbjct: 1 MTAAVEFDPVHMATHEYNFPETVSFARDVQTLSGEEILVGTGLKGEDIHAVVGGAPCQGF 60
Query: 336 TRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKGFECSTVRNLFVEKLTYCGFV 515
+ GK +DPR F I+ ++ + +Y ++ENV G R E + F
Sbjct: 61 SMIGKRA-LDDPRNQLVNEFARIVLEIQS-RYFVLENVAGLATGKHRKFLDEVIEL--FE 116
Query: 516 YQEF-MLSPVSV------GVPNSRLRYYCIAKRNN 599
E+ +++PV V GVP SR R I R +
Sbjct: 117 SNEYQVVTPVRVLQAAEFGVPQSRKRLVLIGARKD 151
>UniRef50_A0KH69 Cluster: Cytosine-specific methyltransferase; n=1;
Aeromonas hydrophila subsp. hydrophila ATCC 7966|Rep:
Cytosine-specific methyltransferase - Aeromonas
hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB
9240)
Length = 440
Score = 56.0 bits (129), Expect = 9e-07
Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 25/199 (12%)
Frame = +3
Query: 69 VSSTMEEKMEHRILELYSGIGGMHCAWNESTIKG-----KVVAAIDI---NTVANDVYKY 224
+SS ++ + ++L+SG GG+ ++ KG K A + N + Y Y
Sbjct: 1 MSSLPSQQKQGTFIDLFSGCGGLSLGLMQAGWKGLFAIEKTSGAFETLQHNLLGGGRYTY 60
Query: 225 NFPETLLFTKNIQSLTPIEIEKY-------KIDTVLMSPPCQPFTRNGKNLDENDPRTNS 383
++P L N+ T +E K K+D ++ PPCQ F+ GK D +DPR
Sbjct: 61 DWPNWLP-KSNMTVDTLLENHKGNLSLLAGKVDLIVGGPPCQGFSLAGKR-DPDDPRNKL 118
Query: 384 FLYFIDILDKLNTLQYILMENVKGFECSTVR----------NLFVEKLTYCGFVYQEFML 533
+ID++ +L + +L+ENV+GF + + EKL G+ ++
Sbjct: 119 AEQYIDVV-RLVKPKLLLLENVRGFNTKFTKGRGEGSEPYSKIVKEKLEELGYGVSYKVI 177
Query: 534 SPVSVGVPNSRLRYYCIAK 590
+ GVP R R+ IAK
Sbjct: 178 TSSDWGVPQRRPRFILIAK 196
>UniRef50_Q858Z2 Cluster: Gp9.1; n=1; Streptomyces phage phiBT1|Rep:
Gp9.1 - Streptomyces phage phiBT1
Length = 166
Score = 56.0 bits (129), Expect = 9e-07
Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 2/163 (1%)
Frame = +3
Query: 105 ILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIEI 284
ILEL +G GG+ A E+ KV +++ A +V KY FP+ NI +
Sbjct: 3 ILELCAGYGGLGIAV-EALTGDKVTVVAEVHKAACEVMKYRFPDA----PNIGDVRHARW 57
Query: 285 EKYK--IDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKGF 458
E + +DT+ PCQ + GK R+ + D + ++ +Y+ +ENV
Sbjct: 58 EDLRGEVDTITAGFPCQDISNAGKRAGIQGERSGIWFNIADAI-RIIRPRYVYLENVGAI 116
Query: 459 ECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIA 587
+ + + L+ G+ L +G P+ RLR++C A
Sbjct: 117 R-NRGQAAVLSSLSEIGYDAVWTSLRASDIGAPHERLRWFCAA 158
>UniRef50_Q5JVT2 Cluster: tRNA aspartic acid methyltransferase 1;
n=3; Homo sapiens|Rep: tRNA aspartic acid
methyltransferase 1 - Homo sapiens (Human)
Length = 86
Score = 56.0 bits (129), Expect = 9e-07
Identities = 27/49 (55%), Positives = 34/49 (69%)
Frame = +3
Query: 153 ESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIEIEKYKI 299
ES I +VVAAID+NTVAN+VYKYNFP T L K I+ P++ K+
Sbjct: 1 ESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIE--RPLDTNNRKL 47
>UniRef50_P08455 Cluster: Modification methylase NgoPII; n=8;
Bacteria|Rep: Modification methylase NgoPII - Neisseria
gonorrhoeae
Length = 330
Score = 56.0 bits (129), Expect = 9e-07
Identities = 45/170 (26%), Positives = 80/170 (47%), Gaps = 4/170 (2%)
Frame = +3
Query: 102 RILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIE 281
+I+ L+SG GG+ + ++ + + AA + + +K N P+T L +I+ + +
Sbjct: 2 KIISLFSGCGGLDLGFEKAGFE--IPAANEYDKTIWATFKANHPKTHLIEGDIRKIKEED 59
Query: 282 IEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKGFE 461
+ +ID ++ PPCQ ++ G +D R F +I IL K ++ L ENV G
Sbjct: 60 FPE-EIDGIIGGPPCQSWSEAGALRGIDDARGQLFFDYIRIL-KSKQPKFFLAENVSGML 117
Query: 462 CS----TVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNN 599
+ V+NL ++ CG+ M + GV R R + I R +
Sbjct: 118 ANRHNGAVQNL-LKMFDGCGYDVTLTMANAKDYGVAQERKRVFYIGFRKD 166
>UniRef50_Q5ZZS4 Cluster: Cytosine-specific methyltransferase; n=4;
Mycoplasma hyopneumoniae|Rep: Cytosine-specific
methyltransferase - Mycoplasma hyopneumoniae (strain
232)
Length = 416
Score = 55.6 bits (128), Expect = 1e-06
Identities = 50/185 (27%), Positives = 83/185 (44%), Gaps = 14/185 (7%)
Frame = +3
Query: 99 HRILELYSGIGGMHCAWNESTIKGKV-VAAIDINTVANDVYKYNFPETL----LFTKNIQ 263
+ ++L+SG GG+ C + G + +A+++I A + Y YNF + LF
Sbjct: 92 YNFIDLFSGAGGLSCG---LVMAGFLPLASLEIMKQAFETYAYNFKKRSKNKELFKLGDI 148
Query: 264 SLTPIEIEKY------KIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTL 425
+ I+ E Y ++D + PCQ F+ G + + DPR N +L +DI+ L
Sbjct: 149 RDSKIKSEFYDHFKDQELDLIAGGFPCQGFSMAGNRVFD-DPRNNLYLEMLDIVANLKP- 206
Query: 426 QYILMENVKGFE---CSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRN 596
+++LMENV+G + ++ G+ L+ GV R R IA R
Sbjct: 207 KFVLMENVQGLRTMLSGQIEAKIIKDFEKIGYKINVATLNSADFGVAQIRKRVIFIANRI 266
Query: 597 NTWNF 611
NF
Sbjct: 267 GLTNF 271
>UniRef50_P09915 Cluster: Modification methylase Rho11sI; n=2;
Siphoviridae|Rep: Modification methylase Rho11sI -
Bacteriophage rho-11s
Length = 503
Score = 55.6 bits (128), Expect = 1e-06
Identities = 47/172 (27%), Positives = 76/172 (44%), Gaps = 6/172 (3%)
Frame = +3
Query: 102 RILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYK--YNFPETLLFTKNIQSLTP 275
R++ L+SGIG A ++ ++V +I+ A Y +N E L N ++
Sbjct: 5 RVMSLFSGIGAFEAALRNIGVEYELVGFSEIDKYAIKSYCAIHNADEQL----NFGDVSK 60
Query: 276 IEIEKY-KIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVK 452
I+ +K + D ++ PCQ F+ G D R F +ID L K +Y + ENVK
Sbjct: 61 IDKKKLPEFDLLVGGSPCQSFSVAGYRKGFEDTRGTLFFQYIDTL-KEKQPRYFVFENVK 119
Query: 453 GF---ECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNN 599
G + N+ E + G+ +L+ VP +R R Y I R +
Sbjct: 120 GLINHDKGNTLNIMAESFSEVGYRIDLELLNSKFFNVPQNRERIYIIGVRED 171
>UniRef50_Q83VT0 Cluster: EcoT38I methyltransferase; n=1;
Enterobacteria phage P2|Rep: EcoT38I methyltransferase -
Bacteriophage P2
Length = 363
Score = 55.2 bits (127), Expect = 2e-06
Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 5/180 (2%)
Frame = +3
Query: 108 LELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIEIE 287
+ L++G GGM ++ + + V A DI+ A D +K N E+ +F +I + E+
Sbjct: 7 VSLFTGAGGMDVGFSNAGFR--TVWANDIDKDACDTFKLNH-ESPVFCGDIDEMLS-ELS 62
Query: 288 KYK-IDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKGF-- 458
K I V PPCQ F+ GK +D +DPR+ + F+ +D + + +MENVK
Sbjct: 63 GLKNIGCVFGGPPCQGFSVAGK-MDAHDPRSKLVMSFMRAVDIIQP-ECFVMENVKALAQ 120
Query: 459 --ECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNNTWNFKRKDELI 632
+ VR + G+ +L+ GVP +R R + I R+ + KR + I
Sbjct: 121 LSKFEPVRCELFKMAEKSGYRSALLVLNSKDFGVPQNRERMFFIGFRSEN-DVKRVEAAI 179
>UniRef50_P34906 Cluster: Modification methylase FnuDI; n=5;
cellular organisms|Rep: Modification methylase FnuDI -
Fusobacterium nucleatum
Length = 344
Score = 55.2 bits (127), Expect = 2e-06
Identities = 45/177 (25%), Positives = 83/177 (46%), Gaps = 6/177 (3%)
Frame = +3
Query: 102 RILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIE 281
++L L+SG GG+ + + + ++ A + + + Y+ N L+ K+I+ + E
Sbjct: 2 KLLSLFSGAGGLDLGFERAGFE--IIVANEYDKTIWETYEKNHKAKLI-KKDIREILSEE 58
Query: 282 IEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKGF- 458
+ K D ++ PPCQ ++ G NDPR F +I IL + ++ L ENVKG
Sbjct: 59 LPKS--DGIIGGPPCQSWSEAGSLRGINDPRGKLFYEYIRILKDIQP-KFFLAENVKGML 115
Query: 459 ---ECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRN--NTWNFK 614
V+++ +++ G+ +L+ GV R R + + R N NF+
Sbjct: 116 SKRNTEAVKDI-IKEFEEAGYNVFIKLLNAFDYGVAQDRERVFYVGFRKDLNISNFE 171
>UniRef50_Q3VKI0 Cluster: C-5 cytosine-specific DNA methylase; n=4;
Bacteria|Rep: C-5 cytosine-specific DNA methylase -
Pelodictyon phaeoclathratiforme BU-1
Length = 415
Score = 54.4 bits (125), Expect = 3e-06
Identities = 44/173 (25%), Positives = 72/173 (41%), Gaps = 1/173 (0%)
Frame = +3
Query: 69 VSSTMEEKMEHRILELYSGIGGMHCAWNESTIKGKV-VAAIDINTVANDVYKYNFPETLL 245
++ + +K+ R+++L++G GG+ ++ V A D N+ A + Y NF
Sbjct: 6 LAGRLNDKLSLRVIDLFAGAGGLSAGFSHFFGHHFTPVWANDFNSCAAESYNANFGHHCR 65
Query: 246 FTKNIQSLTPIEIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTL 425
+ L K D V+ PPCQ F+ KN E D R ++ F+D++ +L+
Sbjct: 66 VGDIVDILDNPTTIIPKADVVIGGPPCQGFSLLNKN-KEGDARKQLWIPFMDVV-RLSGA 123
Query: 426 QYILMENVKGFECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCI 584
+MENV S GF L GVP R R + +
Sbjct: 124 DVFVMENVPELLSSLECREIYAMANAMGFKLVSAKLCAADYGVPQIRWRAFIV 176
>UniRef50_A1VX43 Cluster: DNA-cytosine methyltransferase; n=2;
Proteobacteria|Rep: DNA-cytosine methyltransferase -
Polaromonas naphthalenivorans (strain CJ2)
Length = 373
Score = 54.4 bits (125), Expect = 3e-06
Identities = 43/166 (25%), Positives = 68/166 (40%), Gaps = 6/166 (3%)
Frame = +3
Query: 108 LELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIEIE 287
++L+ G GG+ C + ++ VVA ID++ Y+ N +++ +LT ++E
Sbjct: 27 IDLFCGAGGLSCGLKKVGVR--VVAGIDVDAACQYPYEANHRGAKFLLQDVTTLTGADLE 84
Query: 288 KYKIDTVLM----SPPCQPFTR--NGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENV 449
T + PCQPF+ N K END LY L + MENV
Sbjct: 85 ALWSPTSVRLLAGCAPCQPFSSYANTKASSENDKW--GLLYQFGRLVTETKPDLVTMENV 142
Query: 450 KGFECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIA 587
G F+ L G+ + +L+ G P R R +A
Sbjct: 143 PGLAAQAPFKAFLHTLKTLGYSIEYAVLNAADYGAPQQRKRLVLLA 188
>UniRef50_P11408 Cluster: Modification methylase MspI; n=2;
Gammaproteobacteria|Rep: Modification methylase MspI -
Moraxella sp
Length = 418
Score = 54.4 bits (125), Expect = 3e-06
Identities = 42/176 (23%), Positives = 78/176 (44%), Gaps = 3/176 (1%)
Frame = +3
Query: 96 EHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTP 275
+ + ++L+SGIGG+ ++ + GK V + +I+ A Y NF ++ +I +
Sbjct: 104 DFKFIDLFSGIGGIRQSFEVNG--GKCVFSSEIDPFAKFTYYTNFG--VVPFGDITKVEA 159
Query: 276 IEIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKG 455
I ++ D + PCQPF+ GK P + + I + + + +ENV G
Sbjct: 160 TTIPQH--DILCAGFPCQPFSHIGKREGFEHPTQGTMFHEIVRIIETKKTPVLFLENVPG 217
Query: 456 F---ECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNNTWNFK 614
+ + +E L G+ +L G+P R R+Y +A N +F+
Sbjct: 218 LINHDDGNTLKVIIETLEDMGYKVHHTVLDASHFGIPQKRKRFYLVAFLNQNIHFE 273
>UniRef50_A7BQ17 Cluster: C-5 cytosine-specific DNA methylase; n=2;
Gammaproteobacteria|Rep: C-5 cytosine-specific DNA
methylase - Beggiatoa sp. PS
Length = 418
Score = 54.0 bits (124), Expect = 4e-06
Identities = 47/176 (26%), Positives = 80/176 (45%), Gaps = 10/176 (5%)
Frame = +3
Query: 90 KMEHRIL-ELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQS 266
+++ RIL +L++G GG+ C + + A +I V + YK+N P T L +++
Sbjct: 27 RLKDRILVDLFAGAGGLSCGLEMAGFHP--LFANEIEPVYANTYKHNHPNTDLVIGDVRQ 84
Query: 267 LTP------IEIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQ 428
+ + +++ +ID + PPCQ F+ N +D R F +I + +L +
Sbjct: 85 MCASTLRERLGVKQGEIDLLAGGPPCQGFSINAPIRSLDDDRNYLFREYISVAQEL-LPK 143
Query: 429 YILMENVKGFEC---STVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIA 587
IL+ENV G TV +L G+ +L GVP R R +A
Sbjct: 144 AILIENVPGIISLGKGTVVEKIYSELEQLGYKVNHRILFAGHYGVPQMRFRTIFLA 199
>UniRef50_Q38652 Cluster: Type II DNA-methyltransferase; n=1; Phage
phi3T|Rep: Type II DNA-methyltransferase - Bacteriophage
phi-3T
Length = 326
Score = 54.0 bits (124), Expect = 4e-06
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 4/169 (2%)
Frame = +3
Query: 105 ILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIEI 284
+LEL+ G GG+ +S ++V A+DI+ A Y++NF + + + I+I
Sbjct: 16 VLELFCG-GGLGATGFKSA-GYEIVKALDIDKNAVKAYRHNFGDYV----EQADINEIDI 69
Query: 285 EKYK-IDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKGFE 461
+ D + PPCQ F+ GK + + R +++I+++ ++ ENVKG
Sbjct: 70 DSLPDTDVIFGGPPCQDFSVAGKGVGADGERGKLVWRYLEIIERKQPKAFV-FENVKGLI 128
Query: 462 CSTVRNLF---VEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNN 599
R F +EK G+ +++ GV R R + + RN+
Sbjct: 129 TKRHRPTFDALIEKFNEIGYEISWEVVNAWDYGVAQKRERVFIVGVRND 177
>UniRef50_Q9KJH1 Cluster: Cytosine-specific methyltransferase; n=1;
Bacillus sp. LU11|Rep: Cytosine-specific
methyltransferase - Bacillus sp. LU11
Length = 365
Score = 53.6 bits (123), Expect = 5e-06
Identities = 47/180 (26%), Positives = 85/180 (47%), Gaps = 7/180 (3%)
Frame = +3
Query: 93 MEHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLT 272
M+ ++ L+SG GG+ + S ++ AIDI+ A YK N + ++ +I +
Sbjct: 1 MKPTVVSLFSGGGGLDLGFKNSGFN--IIWAIDIDKDAVLTYKENLGDHIILG-DITKIQ 57
Query: 273 PIEIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVK 452
+I + D V+ PPCQ F+ GK + D R ++ I++++ ++ ENV
Sbjct: 58 EKDIPE--ADVVIGGPPCQSFSLVGKRRSD-DERGQLVWQYLRIINEIRPKCFV-FENVV 113
Query: 453 GFECSTVR--NLFVEKLTYC----GFVYQEFMLSPVSVGVPNSRLRYYCIAKRNN-TWNF 611
G + + NL +++L G+ Q +L+ GVP R R + + R +NF
Sbjct: 114 GLKSAKTAEGNLVLDELIIAFREIGYEVQWSVLNAADYGVPQRRKRIFIVGTREGIKFNF 173
>UniRef50_Q59958 Cluster: Methyl transferase; n=13; Bacilli|Rep:
Methyl transferase - Streptococcus pneumoniae
Length = 452
Score = 53.6 bits (123), Expect = 5e-06
Identities = 51/192 (26%), Positives = 83/192 (43%), Gaps = 9/192 (4%)
Frame = +3
Query: 102 RILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFP-ETLLFTKNIQSLTPI 278
R ++L+SGIGG ++ + + +I+ A + YK F E + +I+ ++
Sbjct: 2 RFIDLFSGIGGFRLGME--SVGHECIGFCEIDKFARESYKSIFQTEGEIEFHDIRDVSDD 59
Query: 279 EIEKY--KIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVK 452
E +K K+D + PCQ F+ G+ L D R F ++ +++ +ENVK
Sbjct: 60 EFKKLRGKVDVICGGFPCQAFSIAGRRLGFEDTRGTLFFEIARAAKQIQP-RFLFLENVK 118
Query: 453 GFECSTVRNLFVEKLT---YCGFVYQEFMLSPVSVGVPNSRLRYYCIA---KRNNTWNFK 614
G F LT GF + ML+ GVP +R R + I KR F
Sbjct: 119 GLLNHDKGRTFTTILTTLDELGFDVEWQMLNSKDFGVPQNRERVFIIGHSRKRGTRLGFP 178
Query: 615 RKDELITCLPKT 650
+ E P+T
Sbjct: 179 FRREGQATNPET 190
>UniRef50_Q3E2J7 Cluster: C-5 cytosine-specific DNA methylase; n=1;
Chloroflexus aurantiacus J-10-fl|Rep: C-5
cytosine-specific DNA methylase - Chloroflexus
aurantiacus J-10-fl
Length = 322
Score = 53.6 bits (123), Expect = 5e-06
Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 5/170 (2%)
Frame = +3
Query: 102 RILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIE 281
R ++L+ GIGG C + I + A D +A V++ NFPE + ++ L+ +
Sbjct: 5 RAIDLFCGIGGNSCGARAAGID--IAAGFDKWALAGQVFQDNFPEARFYNVDLAILSRRQ 62
Query: 282 IEKYK-----IDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMEN 446
I + +D +L SP C + + D + + + ++ +++++EN
Sbjct: 63 IHHFHETIGHVDLILASPECTSHSV-ARGASPKDKASLRLSWNVWRFAEVFQPRWVVVEN 121
Query: 447 VKGFECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRN 596
V F F+E + G+ E ML + GVP R R Y + R+
Sbjct: 122 VPAFRLWEHYRHFLEIMQRSGYRVLEQMLVASAFGVPQRRRRLYLLFDRD 171
>UniRef50_O31098 Cluster: Cytosine-specific methyltransferase; n=2;
Bacteria|Rep: Cytosine-specific methyltransferase -
Flavobacterium aquatile
Length = 343
Score = 53.6 bits (123), Expect = 5e-06
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 8/160 (5%)
Frame = +3
Query: 159 TIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIEIEKYKIDTVLMSPPCQPFT 338
T+ KVV A+D + A +Y NF TK+++ + P E+ + D +L PCQ F+
Sbjct: 39 TLPFKVVYAVDNDAYATKIYNDNFAHK-CETKDVRDIVPSEVPDH--DILLGGFPCQSFS 95
Query: 339 RNGKN---LDENDPRTNSFLYFIDILDKLNTLQYILMENVKGFECSTVRNLF---VEKLT 500
+ +N L D R F I +L K ++ + ENVKG + F +++
Sbjct: 96 ISAQNPPRLGYKDDRGKLFFEMIKVL-KEKKPRFFIGENVKGLLSANKGQAFPMIIKEFE 154
Query: 501 YCGFVYQEFMLSPVSVGVPNSRLRYYCIAKR--NNTWNFK 614
G+ +L+ GVP R R + + R ++ NFK
Sbjct: 155 KAGYHINYKLLNSSEFGVPQKRERVFIVGFRDFDDYLNFK 194
>UniRef50_A7CAE2 Cluster: DNA-cytosine methyltransferase; n=1;
Ralstonia pickettii 12D|Rep: DNA-cytosine
methyltransferase - Ralstonia pickettii 12D
Length = 423
Score = 53.6 bits (123), Expect = 5e-06
Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 19/198 (9%)
Frame = +3
Query: 63 VNVSSTMEEKMEHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNF---- 230
V S + + + ++L++G GG A +++ ++ VVAA++++ A++ Y N
Sbjct: 52 VRAPSKSASQRKLQCVDLFAGAGGFSLAAHKAGMR--VVAAVELDKKASETYHANLIKRR 109
Query: 231 ----PETLLFTKNIQSLTPIEI------EKYKIDTVLMSPPCQPFT-RNGKNLDENDPRT 377
L+++NI L+P E D VL PPCQ F+ K NDPR
Sbjct: 110 KKVSDRPRLYSENIMELSPERFKSENFPEGASCDIVLGGPPCQGFSVHRIKGAGVNDPRN 169
Query: 378 NSFLYFIDILDKLNTLQYILMENVKGF---ECSTVRNLFVEKLTYCGF-VYQEFMLSPVS 545
+ + + L + LMENV G N F+ + G+ + L +
Sbjct: 170 GLIHRYFEYVKCLQPKAF-LMENVPGLLWPRHKKYLNKFLAESKKVGYRIIGPLRLDARN 228
Query: 546 VGVPNSRLRYYCIAKRNN 599
GVP R+R + + RN+
Sbjct: 229 YGVPQRRVRVFVLGVRND 246
>UniRef50_Q72BW9 Cluster: Cytosine-specific methyltransferase; n=2;
Bacteria|Rep: Cytosine-specific methyltransferase -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 487
Score = 53.2 bits (122), Expect = 7e-06
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 5/166 (3%)
Frame = +3
Query: 102 RILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIE 281
R + + SGI AW+ + VA +I V ++FP N+ T I
Sbjct: 2 RYISICSGIEAATVAWHP--LGWHPVAFAEIEPFPCAVLAHHFPNV----PNLGDFTTIV 55
Query: 282 IEKYK--IDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKG 455
+E+Y+ +D V+ PCQ F+ G +DPR N L F+ +L + ++++ ENV G
Sbjct: 56 MEQYRGTVDLVVGGTPCQAFSVAGLRRGLDDPRGNLTLAFLRLLADIRP-RWVVWENVPG 114
Query: 456 ---FECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCI 584
+ V F+ L G+ + +L GVP R R + +
Sbjct: 115 VLSIDRGRVFGAFLGGLAQLGYGFAYRILDAQYFGVPQRRRRVFVV 160
>UniRef50_A0ZJB7 Cluster: Cytosine-specific methyltransferase; n=2;
Bacteria|Rep: Cytosine-specific methyltransferase -
Nodularia spumigena CCY 9414
Length = 502
Score = 53.2 bits (122), Expect = 7e-06
Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 3/169 (1%)
Frame = +3
Query: 87 EKMEHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQS 266
+ + ++L++GIGG A + + G + +IN A Y NF + N+
Sbjct: 2 QNIRFTFIDLFAGIGGFKMALSNNG--GHSLGFSEINQDAIKTYCDNFQIEPSY--NLGD 57
Query: 267 LTPIEIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMEN 446
+T I+ E D + PCQ ++ GKNL +D R + I +L + +I EN
Sbjct: 58 ITKIK-ELPPHDLLTAGVPCQSWSIAGKNLGFDDDRGQLWNDTIYLLQQSQPKAFIF-EN 115
Query: 447 VKGF-ECSTVRNL--FVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCI 584
VKG + ++L +E++ G+ + F+++ GVP +R+R Y I
Sbjct: 116 VKGLVDPRNKQSLAYILERIAKAGYYAKYFVINSFDYGVPQNRIRVYII 164
>UniRef50_Q1ISM0 Cluster: DNA-cytosine methyltransferase; n=2;
Bacteria|Rep: DNA-cytosine methyltransferase -
Acidobacteria bacterium (strain Ellin345)
Length = 359
Score = 52.8 bits (121), Expect = 9e-06
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 4/166 (2%)
Frame = +3
Query: 108 LELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIEIE 287
LEL +G GG ++ I VA ++IN A + + N P + ++Q+ P
Sbjct: 46 LELCAGAGGQALGLEQAGINH--VALVEINKHACETLRLNRPNWKVVEGDLQTFDP---S 100
Query: 288 KYK-IDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKGFEC 464
YK D V PC PF+ GK L + D R N F ++++D + + +++ENV+G
Sbjct: 101 PYKGADIVSAGLPCPPFSVAGKQLGKLDER-NLFPAMVNVVDAVRP-RAVMVENVRGILD 158
Query: 465 ST---VRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKR 593
+ R ++L G+ +++ GVP R R +A R
Sbjct: 159 AVFIDYREHVSKQLRKLGYTPGWHLMNACEFGVPQLRPRVVFVAMR 204
>UniRef50_P09795 Cluster: Modification methylase SinI; n=3;
Bacteria|Rep: Modification methylase SinI - Salmonella
infantis
Length = 461
Score = 52.8 bits (121), Expect = 9e-06
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 7/131 (5%)
Frame = +3
Query: 84 EEKMEHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQ 263
E K + + L +SG G+ ++ + + A +I+ A D N P L +I+
Sbjct: 70 EPKNKPKALSFFSGAMGLDLGIEQAGFE--TLLASEIDKAARDTILSNRPNMALIG-DIR 126
Query: 264 SLTPIEIEKY-------KIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNT 422
T +I K +ID ++ PPCQ F+ GK L D R N F+ ++D+ +
Sbjct: 127 DYTTEDILKLAGVSSGNEIDLIMGGPPCQAFSTAGKRLGLEDERGNVFIKYLDVALDIRP 186
Query: 423 LQYILMENVKG 455
+YI++ENV+G
Sbjct: 187 -KYIVIENVRG 196
>UniRef50_P31033 Cluster: Modification methylase NgoMIV; n=11;
Bacteria|Rep: Modification methylase NgoMIV - Neisseria
gonorrhoeae
Length = 312
Score = 52.8 bits (121), Expect = 9e-06
Identities = 56/204 (27%), Positives = 90/204 (44%), Gaps = 4/204 (1%)
Frame = +3
Query: 93 MEHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLT 272
M+ LE+ +G GG + VA I+I A + N P+ + +++
Sbjct: 1 MQFTSLEICAGAGGQALGLERAGFSH--VALIEIEPSACQTLRLNRPDWNVIEGDVRLF- 57
Query: 273 PIEIEKYK-IDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENV 449
+ E Y ID + PC PF++ GK L ++D R + F I L K + I++ENV
Sbjct: 58 --QGEGYDGIDLLAGGVPCPPFSKAGKQLGKDDER-DLFPEAIR-LAKETDPKAIMLENV 113
Query: 450 KGF---ECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNNTWNFKRK 620
+G + RN E+ G++ Q +L GV R R +A +N NF +
Sbjct: 114 RGLLDPKFENYRNHITEQFAKLGYLGQWKLLYAADYGVSQLRPRVLFVALKNEYTNFFKW 173
Query: 621 DELITCLPKTFAKPHCLKDIIENN 692
E + PKT + L D++ N
Sbjct: 174 PEPNSEQPKTVGE--LLFDLMSEN 195
>UniRef50_P50196 Cluster: Modification methylase Eco47II; n=6;
Bacteria|Rep: Modification methylase Eco47II -
Escherichia coli
Length = 417
Score = 52.8 bits (121), Expect = 9e-06
Identities = 54/216 (25%), Positives = 97/216 (44%), Gaps = 9/216 (4%)
Frame = +3
Query: 99 HRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPI 278
+ +LEL++G GGM ++ +K ++ ID + A + N PE + ++ + +
Sbjct: 81 YTVLELFAGAGGMALGLEKAGLKSVLLNEIDSH--ACKTLRKNRPEWNVVEGDV---SQV 135
Query: 279 EIEKYK--IDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVK 452
+ Y+ +D + PCQ F+ GK L D R F F ++N + +L ENV+
Sbjct: 136 DFTPYRNTVDVLAGGFPCQAFSYAGKKLGFEDTRGTLFFEFARAAKEINP-KVLLAENVR 194
Query: 453 GF-------ECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNNTWNF 611
G T++N+ + L Y +++ +L + VP R R +A RN+
Sbjct: 195 GLLNHDAGRTLETIKNIITD-LGYT--LFEPRVLKAIFYKVPQKRERLIIVAVRNDL--- 248
Query: 612 KRKDELITCLPKTFAKPHCLKDIIENNVPDDYLVPD 719
D + P ++ K LKD ++ D VP+
Sbjct: 249 --ADGIDYEWPSSYNKILTLKDALKKGELYDSDVPE 282
>UniRef50_P25264 Cluster: Modification methylase HgiCII; n=4;
Herpetosiphon aurantiacus|Rep: Modification methylase
HgiCII - Herpetosiphon aurantiacus (Herpetosiphon
giganteus)
Length = 437
Score = 52.8 bits (121), Expect = 9e-06
Identities = 36/120 (30%), Positives = 63/120 (52%)
Frame = +3
Query: 96 EHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTP 275
+ R ++L++GIGG + G V + +I+ A VY+ N+P T N+ +T
Sbjct: 3 QFRFIDLFAGIGGFRLGLE--AVGGICVGSAEIDQQAIKVYRQNWP-TDRSEHNLGDITT 59
Query: 276 IEIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKG 455
++ + D V+ PCQP++ GKN +DPR + I ++ ++N + + ENVKG
Sbjct: 60 LQ-QLPAHDLVVGGVPCQPWSIAGKNQAFDDPRGQLWADVIRLV-RINQPKAFIFENVKG 117
>UniRef50_Q9ZLZ0 Cluster: Cytosine-specific methyltransferase; n=2;
Helicobacter pylori|Rep: Cytosine-specific
methyltransferase - Helicobacter pylori J99
(Campylobacter pylori J99)
Length = 351
Score = 52.4 bits (120), Expect = 1e-05
Identities = 50/203 (24%), Positives = 88/203 (43%), Gaps = 3/203 (1%)
Frame = +3
Query: 99 HRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPI 278
+++ +++ G GG+ ++ +++ A DI+ A Y+ N ET +I L
Sbjct: 2 YKVADIFCGAGGLSYGFSTHPYF-ELIWANDIDKDAILSYQANHKETQTILCDIAQLHCH 60
Query: 279 EIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKGF 458
+ + ID +L PPCQ ++ GK + D + N F ++ ILD + + + ENV G
Sbjct: 61 NLPRVPIDILLGGPPCQSYSTLGKR--KMDEKANLFKEYLRILDLVKP-KIFVFENVVGL 117
Query: 459 ECSTVRNLF---VEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNNTWNFKRKDEL 629
LF G++ + +L+ + GVP R R + +FK+K
Sbjct: 118 MSMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGALK---SFKQK--- 171
Query: 630 ITCLPKTFAKPHCLKDIIENNVP 698
PK LKD + + P
Sbjct: 172 -FYFPKPIKTHFSLKDALGDLPP 193
>UniRef50_Q139N2 Cluster: DNA-cytosine methyltransferase; n=1;
Rhodopseudomonas palustris BisB5|Rep: DNA-cytosine
methyltransferase - Rhodopseudomonas palustris (strain
BisB5)
Length = 490
Score = 52.4 bits (120), Expect = 1e-05
Identities = 47/174 (27%), Positives = 81/174 (46%), Gaps = 5/174 (2%)
Frame = +3
Query: 93 MEHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLT 272
+E R+ L++GIGG A+ ++ VVA +I++ V + ++P+T LF ++I +
Sbjct: 25 VELRVASLFAGIGGFDKAFE--SVSASVVAQCEIDSFCRAVLRRHWPQTKLF-EDITKIN 81
Query: 273 PIEIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILD--KLNTLQYILMEN 446
P E I T PCQ + N + + N F ++D + + IL+EN
Sbjct: 82 PAEFPAADIWTA--GFPCQDVSLARGNHGRDGLKGNHTSLFFKLMDLAEAKKPKIILLEN 139
Query: 447 VKGFECSTVR---NLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNN 599
V G S + + +LT G+ +L+ G P SR R + +A R +
Sbjct: 140 VVGLLNSHQGCDFAIILRELTNQGYAVSWRVLNARYFGSPQSRSRVFMVAWRGD 193
>UniRef50_A1BCM3 Cluster: DNA-cytosine methyltransferase; n=3;
Bacteria|Rep: DNA-cytosine methyltransferase -
Chlorobium phaeobacteroides (strain DSM 266)
Length = 371
Score = 52.4 bits (120), Expect = 1e-05
Identities = 44/177 (24%), Positives = 79/177 (44%), Gaps = 13/177 (7%)
Frame = +3
Query: 102 RILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIE 281
R+ + +SG GG + + I+ + A+D + A Y+ NF + T I++L
Sbjct: 13 RVYDFFSGCGGTSVGFGRAGIQHAL--AVDSCSDAISTYQKNFIGVPVITDPIETLNVDR 70
Query: 282 IEKY-----KIDTVLMSPPCQPFTR---NGKNLDENDPRTNSFLYFIDILDKLNTLQYIL 437
I+ Y ++ PCQPFT+ N K +D R +YF DI+ + +
Sbjct: 71 IQNYFSHNPEVKLFCGCAPCQPFTKQKTNTKKDAASDDRRGLLIYFSDIVHAC-LPELVF 129
Query: 438 MENVKGFECSTVRN-----LFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKR 593
+ENV G + ++ + +F+ +L + +++ G P R R+ IA R
Sbjct: 130 VENVPGLQKFSLEDGGPLAMFISRLKQNDYFVDFDVIAAQDYGSPQVRRRFVLIASR 186
>UniRef50_A5EB64 Cluster: Cytosine-specific methyltransferase; n=2;
Proteobacteria|Rep: Cytosine-specific methyltransferase
- Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)
Length = 381
Score = 52.0 bits (119), Expect = 2e-05
Identities = 56/219 (25%), Positives = 99/219 (45%), Gaps = 17/219 (7%)
Frame = +3
Query: 75 STMEEKMEHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPET----- 239
S ++K++ +L++G GG + + I V AAI+ + A Y+ N +T
Sbjct: 14 SKSDDKLKVSACDLFAGAGGFSLGAHLAGIN--VAAAIEWDKYACQTYRANLIDTGLAST 71
Query: 240 LLFTKNIQSLTPIEIE------KYKIDTVLMSPPCQPFTRNGKN-LDENDPRTNSFLYFI 398
LF ++I L P ++ + D +L PPCQ F+ + N +DPR L +
Sbjct: 72 HLFEEDISKLAPNRVKLVAGFHERPCDILLGGPPCQGFSAHRLNDAGVDDPRNTLLLRYF 131
Query: 399 DILDKLNTLQYILMENVKGF---ECSTVRNLFVEKLTYCGF-VYQEFMLSPVSVGVPNSR 566
+ + L + + L+ENV G + N F E + V + +++ GVP +R
Sbjct: 132 EYVRVLRPV-FFLVENVPGLLWPKHKKFLNAFYELADRADYGVLEPKVINARDFGVPQNR 190
Query: 567 LRYYCIAKRNNTWNFKRKDELITCLPK-TFAKPHCLKDI 680
R + + ++ +R DE+ T PK T P L ++
Sbjct: 191 RRVFILG-----FDRRRVDEMNTWPPKATHVSPDALGEL 224
>UniRef50_P05102 Cluster: Modification methylase HhaI; n=2;
Bacteria|Rep: Modification methylase HhaI - Haemophilus
parahaemolyticus
Length = 327
Score = 52.0 bits (119), Expect = 2e-05
Identities = 57/213 (26%), Positives = 94/213 (44%), Gaps = 6/213 (2%)
Frame = +3
Query: 102 RILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIE 281
R ++L++G+GG A + + V + + + A +VY+ NF E K +T +
Sbjct: 13 RFIDLFAGLGGFRLALE--SCGAECVYSNEWDKYAQEVYEMNFGE-----KPEGDITQVN 65
Query: 282 IEKYKIDTVLMSP-PCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKGF 458
+ +L + PCQ F+ +GK D R F I+ + + + MENVK F
Sbjct: 66 EKTIPDHDILCAGFPCQAFSISGKQKGFEDSRGTLFFDIARIVREKKP-KVVFMENVKNF 124
Query: 459 ECSTVRN-LFVEKLTY--CGFVYQEFMLSPVSVGVPNSRLRYYCIAKRN--NTWNFKRKD 623
N L V K T + + +L+ + G+P R R Y I RN N NF+
Sbjct: 125 ASHDNGNTLEVVKNTMNELDYSFHAKVLNALDYGIPQKRERIYMICFRNDLNIQNFQ--- 181
Query: 624 ELITCLPKTFAKPHCLKDIIENNVPDDYLVPDK 722
PK F +KD++ + ++LV D+
Sbjct: 182 -----FPKPFELNTFVKDLLLPDSEVEHLVIDR 209
>UniRef50_Q59797 Cluster: Cytosine DNA methyltransferase homolog;
n=1; Neisseria gonorrhoeae|Rep: Cytosine DNA
methyltransferase homolog - Neisseria gonorrhoeae
Length = 347
Score = 51.6 bits (118), Expect = 2e-05
Identities = 46/216 (21%), Positives = 95/216 (43%), Gaps = 4/216 (1%)
Frame = +3
Query: 69 VSSTMEEKMEHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLF 248
+S+ + +IL L+SG GG++ ++++ + V A D + A + ++ N + ++
Sbjct: 6 ISNLNSSSNKPKILSLFSGCGGLYLGFHQAGC--ETVWANDFSHWACESFRKNIGDVIV- 62
Query: 249 TKNIQSLTPIEIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQ 428
+I+ + P + D +L PCQ F+ K R N + F+ ++
Sbjct: 63 EGDIEQINPNDPTIPDCDIILGGFPCQDFSMIWKQPGLEGERGNLYKSFLRFVNAKKPKV 122
Query: 429 YILMENVKGFECSTVRNLFVEKLT---YCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNN 599
++ ENVKG + + + +T CG+ Q + + GVP R R + R +
Sbjct: 123 FV-AENVKGLLTANKKKAIQQIITDFENCGYYVQAKLYNFAEFGVPQFRERVLIVGVRLD 181
Query: 600 T-WNFKRKDELITCLPKTFAKPHCLKDIIENNVPDD 704
T ++F+ + + KP+ +N+P +
Sbjct: 182 TGFDFRHPEPTHNETGENGLKPYVTAGQAISNIPQN 217
>UniRef50_P94147 Cluster: Modification methylase AgeI; n=2;
Bacteria|Rep: Modification methylase AgeI - Ruegeria
gelatinovora (Agrobacterium gelatinovorum)
Length = 429
Score = 51.6 bits (118), Expect = 2e-05
Identities = 41/168 (24%), Positives = 75/168 (44%), Gaps = 9/168 (5%)
Frame = +3
Query: 102 RILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIE 281
+ ++L+ G GG+ + ++ + A D T A YK N P+ + T +I+++ P +
Sbjct: 2 KTIDLFCGAGGLGEGFRQAGFSA--LYANDHETPALATYKENHPDAVCSTDSIETVDPKK 59
Query: 282 IEKY------KIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILME 443
I + ++D V+ PPCQ F+ G+ D+ D R ++ + +++ + L+E
Sbjct: 60 IREDLGVAPGQVDVVMGGPPCQGFSTYGQRRDD-DARNQLYVPYFGFVEEFRPKAF-LIE 117
Query: 444 NVKG---FECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYY 578
NV G V V + G+ L GVP R R +
Sbjct: 118 NVVGLLSMSGGAVLADMVARAEALGYAADVVTLDACEYGVPQHRRRVF 165
>UniRef50_UPI00003B93AB Cluster: putative methylase; n=1;
Lactobacillus phage Lc-Nu|Rep: putative methylase -
Bacteriophage Lc-Nu
Length = 261
Score = 51.2 bits (117), Expect = 3e-05
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 4/166 (2%)
Frame = +3
Query: 102 RILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLF---TK-NIQSL 269
R LEL++GIGG+ A + I+ V + + + ++P+ LF TK + + L
Sbjct: 2 RSLELFAGIGGIALAEQMAGIE--VAGLCEYADYPRAILQKHWPDVPLFKDVTKLDREEL 59
Query: 270 TPIEIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENV 449
T I ID V PCQPF+ GK D R + + I+ ++ +++ ENV
Sbjct: 60 TNAGISPDSIDIVSGGFPCQPFSIAGKRKGTEDDR-DLWPEMFRIIKQI-WPTWVVGENV 117
Query: 450 KGFECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIA 587
F + + + L G+ + F+L ++VG P+ RLR + +A
Sbjct: 118 ANF-ANMELDRTLSDLEGAGYQARAFVLPALAVGAPHQRLRTFIVA 162
>UniRef50_Q70C92 Cluster: Cytosine-specific methyltransferase; n=2;
Streptococcus|Rep: Cytosine-specific methyltransferase -
Streptococcus thermophilus
Length = 365
Score = 51.2 bits (117), Expect = 3e-05
Identities = 44/181 (24%), Positives = 83/181 (45%), Gaps = 13/181 (7%)
Frame = +3
Query: 96 EHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNI----Q 263
++ +++L+SG GG+ + ++ ++ +D + A YK+N +++ ++
Sbjct: 3 KYNVVDLFSGAGGLSQGFKQAGFN--ILMGVDFDDPALKTYKHNLKDSVALKADLFDEES 60
Query: 264 SLTPIE--IEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYIL 437
++ IE + KID ++ PPCQ F+ G D ND R ++ + + + L
Sbjct: 61 AIKDIENNLNGNKIDVIIAGPPCQGFSLTGSR-DINDSRNKLYVAVVHAVKHFKPKAF-L 118
Query: 438 MENV-------KGFECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRN 596
+ENV KG + N F E L Y V + +L+ GVP R R + + R
Sbjct: 119 IENVPGMATLYKGKVKEQIINTF-EDLGYAVSVTDKPLLA-ADYGVPQIRKRMFFVGYRK 176
Query: 597 N 599
+
Sbjct: 177 D 177
>UniRef50_A7CVF0 Cluster: DNA-cytosine methyltransferase; n=1;
Opitutaceae bacterium TAV2|Rep: DNA-cytosine
methyltransferase - Opitutaceae bacterium TAV2
Length = 372
Score = 51.2 bits (117), Expect = 3e-05
Identities = 41/181 (22%), Positives = 84/181 (46%), Gaps = 4/181 (2%)
Frame = +3
Query: 105 ILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIEI 284
+ E+ +G GG +++ A++I++ A + N P+ +F +++ + +
Sbjct: 7 VFEICAGAGGQALGLHQAGFAS--AGAVEIDSDACKTLRLNRPDWNVFECDVREIRGRDF 64
Query: 285 EKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKGF-- 458
+D + PC PF+ GK L +ND R + F + ++ ++ + +++ENV GF
Sbjct: 65 AG--VDLLAGGVPCPPFSTAGKQLGKNDER-DLFPEALRLVREIKP-RAVMLENVGGFAS 120
Query: 459 -ECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNNTW-NFKRKDELI 632
+ S R + L G+ ++ +GVP R RY + R + + F ++I
Sbjct: 121 QKFSAYRRHIFDDLMDMGYTPSARLIQASELGVPQLRPRYIIVGLRKDDYLRFSMNFKVI 180
Query: 633 T 635
T
Sbjct: 181 T 181
>UniRef50_A3IWE3 Cluster: Cytosine-specific methyltransferase; n=3;
Cyanobacteria|Rep: Cytosine-specific methyltransferase -
Cyanothece sp. CCY 0110
Length = 458
Score = 50.8 bits (116), Expect = 4e-05
Identities = 41/171 (23%), Positives = 74/171 (43%), Gaps = 4/171 (2%)
Frame = +3
Query: 108 LELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTK-NIQSLTPIEI 284
++ ++GIGG + + GK + +I+ A VY+ NF + N+ ++ I
Sbjct: 31 IDFFAGIGGFRIPLEK--LGGKCLGYSEIDKEAIKVYQQNFISYYNSEELNLGDISKINS 88
Query: 285 EKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKGFEC 464
+D + PCQP++ GK NDPR + I ++ +I ENVKG
Sbjct: 89 LPKNVDLFVGGVPCQPWSVAGKLKGFNDPRGQLWFNVIRLVKDYQPKAFI-FENVKGLTT 147
Query: 465 STVRN---LFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNNTWN 608
++ V + +V +++ GVP +R R + + R + N
Sbjct: 148 GKNKDKLEYLVNQFEQVNYVVSWKVINSYDFGVPQNRERVFIVGIRKDRKN 198
>UniRef50_Q8EUE9 Cluster: Cytosine-specific methyltransferase; n=1;
Mycoplasma penetrans|Rep: Cytosine-specific
methyltransferase - Mycoplasma penetrans
Length = 426
Score = 50.4 bits (115), Expect = 5e-05
Identities = 43/168 (25%), Positives = 70/168 (41%), Gaps = 9/168 (5%)
Frame = +3
Query: 102 RILELYSGIGGMHCAWNESTIKG----KVVAAIDINTVANDVYKYNFPETLLFTKNIQSL 269
+ ++L++GIGG H A K + V +I+ A Y NF NI+ L
Sbjct: 5 KFIDLFAGIGGFHKALERVAKKNNFNIECVFVSEIDNEAIKTYSSNFSVDKEKIINIRDL 64
Query: 270 TPIEIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENV 449
+ D + PCQ F+ GK D + + I + K +YIL+ENV
Sbjct: 65 DESASQVPDHDFLFAGFPCQTFSNAGKKKGFLDEIRGTLFFDIAKILKNKKPKYILLENV 124
Query: 450 K---GFECSTVRNLFVEKLTYCGFVY--QEFMLSPVSVGVPNSRLRYY 578
K + + ++ L G++ + +LSP G+P R R +
Sbjct: 125 KHLVNHDNGKTWEIIIKTLKEIGYLIPKEPLILSPHEFGIPQERYRVF 172
>UniRef50_Q4J279 Cluster: C-5 cytosine-specific DNA methylase; n=1;
Azotobacter vinelandii AvOP|Rep: C-5 cytosine-specific
DNA methylase - Azotobacter vinelandii AvOP
Length = 502
Score = 50.4 bits (115), Expect = 5e-05
Identities = 56/191 (29%), Positives = 84/191 (43%), Gaps = 29/191 (15%)
Frame = +3
Query: 102 RILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNF-PETLLFTKN------- 257
++LEL SG GG+ T ++ A ++ N AN Y NF PE TK
Sbjct: 31 KVLELCSGCGGLSLGLK--TAGFELAAHVESNDEANATYALNFAPENPAQTKQWAISRDM 88
Query: 258 -IQSLTPIEIE-------KYKIDTVLMSPPCQPFTRNGKNL------DE----NDPRTNS 383
QS++ + + + D + PCQ F R G++ DE NDPR +
Sbjct: 89 VAQSMSDLITDFGLAGGPREAFDVLAAGLPCQAFARIGRSKLRSVTGDEDAFKNDPRASL 148
Query: 384 FLYFIDILDKLNTLQYILMENV---KGFECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGV 554
+ F++I+D+ L IL+ENV F V E L G+V + +L+ GV
Sbjct: 149 YRRFLEIVDETRPLA-ILVENVPDIMNFGGHNVPEEIAEGLRVRGYVTRYTLLNAAFYGV 207
Query: 555 PNSRLRYYCIA 587
P R R + +A
Sbjct: 208 PQLRERLFLVA 218
>UniRef50_A7BUQ1 Cluster: C-5 cytosine-specific DNA methylase; n=1;
Beggiatoa sp. PS|Rep: C-5 cytosine-specific DNA
methylase - Beggiatoa sp. PS
Length = 350
Score = 50.4 bits (115), Expect = 5e-05
Identities = 43/176 (24%), Positives = 75/176 (42%), Gaps = 10/176 (5%)
Frame = +3
Query: 90 KMEHRILELYSGIGGMHCAWNEST---IKGKVVAAIDINTVANDVYKYNFPETLLFTKNI 260
K + I ++G GG+ + +++ I+ K V + DI + N E +I
Sbjct: 111 KGDIEIASYFTGAGGLDIGFEQASDDIIQFKTVFSTDIESYVEQTILTNRAEWDFLRADI 170
Query: 261 QSLTPIEIEKYKIDT----VLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQ 428
+ L+P EI + K+ ++ PPCQPF+ GK D + ++++ + L+ +
Sbjct: 171 RELSP-EIVRRKMGKKPYIIIGGPPCQPFSVAGKQQATKDTLGTLYRHYVEQIHFLSP-E 228
Query: 429 YILMENVKGFECSTVRNLFVE---KLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIA 587
I+MENV G N+ E G+ L G P R R + +A
Sbjct: 229 MIIMENVYGLSQVKSANMIEEIYKSFEQIGYKITHRELMAADYGTPQKRRRLFFVA 284
>UniRef50_Q81H80 Cluster: Cytosine-specific methyltransferase; n=1;
Bacillus cereus ATCC 14579|Rep: Cytosine-specific
methyltransferase - Bacillus cereus (strain ATCC 14579 /
DSM 31)
Length = 373
Score = 50.0 bits (114), Expect = 6e-05
Identities = 46/189 (24%), Positives = 85/189 (44%), Gaps = 8/189 (4%)
Frame = +3
Query: 57 FFVNVSSTMEEKMEHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPE 236
FF V + + ++ + +++ L+SG GG+ ++ +++ A D++ A ++YK+N +
Sbjct: 4 FFFGVDTMVRKQEKLKVVSLFSGCGGLDLGLEQAGF--EILWANDVDKHAVEIYKHNIGK 61
Query: 237 TLLFTKNIQSLTPIEIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKL 416
+ +I ++ EI D + PCQPF+ G D R F I ++
Sbjct: 62 --IVEGDITKISEEEIP--SCDVLTAGFPCQPFSSAGNRKGVMDERGTLFEECIRVIKAK 117
Query: 417 NTLQYILMENVKG------FECSTVRNLFVEKLTYC--GFVYQEFMLSPVSVGVPNSRLR 572
L +L ENV+G + S + + V L G+ + +L GVP R R
Sbjct: 118 KPL-VVLFENVRGILTTKNLDGSLLLDSIVSILDELDPGYNVEYKLLKASDYGVPQQRYR 176
Query: 573 YYCIAKRNN 599
+A R +
Sbjct: 177 VIFVAFRKD 185
>UniRef50_A3PUQ7 Cluster: Cytosine-specific methyltransferase; n=1;
Mycobacterium sp. JLS|Rep: Cytosine-specific
methyltransferase - Mycobacterium sp. (strain JLS)
Length = 349
Score = 50.0 bits (114), Expect = 6e-05
Identities = 30/106 (28%), Positives = 54/106 (50%)
Frame = +3
Query: 177 VAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIEIEKYKIDTVLMSPPCQPFTRNGKNL 356
V ++++N A Y NF E +F +I E+ D V+ PPCQ F+ G
Sbjct: 13 VFSVELNLHAAATYAANFGEDHIFWGDIDEALKGEVPH--ADVVIGGPPCQGFSNLGSK- 69
Query: 357 DENDPRTNSFLYFIDILDKLNTLQYILMENVKGFECSTVRNLFVEK 494
D NDPR + +++++++ N +++ ENV+ F S L +++
Sbjct: 70 DVNDPRNKLWKRYLEVVERANPRVFVI-ENVQRFRNSAEFQLLLDE 114
>UniRef50_A0LHW1 Cluster: DNA-cytosine methyltransferase; n=5;
Proteobacteria|Rep: DNA-cytosine methyltransferase -
Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB)
Length = 429
Score = 50.0 bits (114), Expect = 6e-05
Identities = 51/201 (25%), Positives = 95/201 (47%), Gaps = 21/201 (10%)
Frame = +3
Query: 63 VNVSSTMEEKMEHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETL 242
+ + +T E ++ + L++G GG+ + + +++ A + K N P
Sbjct: 11 ITMKNTDENLLKTATISLFTGAGGLDLGLEAAGFC--ISICVEVAKDAQETLKVNRPHWK 68
Query: 243 LFTK-NIQSLTPIEI-EKYKI---DTVLMS--PPCQPFTRN----GKNLDENDPRTNSFL 389
L +I ++P EI E+ + + L+S PPCQPF+++ G DPR +
Sbjct: 69 LAEPGHIHQISPPEILEQSNLRRGELALLSGGPPCQPFSKSAYWTGGRQGLRDPRASGLR 128
Query: 390 YFIDILDKLNTLQYILMENVKGFECSTVRNLFVEKLT--------YCGFVY--QEFMLSP 539
++D+++ + + IL+ENV+G + R+ ++ L G Y Q F L+
Sbjct: 129 AYLDVVE-VALPKVILLENVRGLAPNGNRDGGLKLLADGIRDINRRLGSAYKLQVFHLNA 187
Query: 540 VSVGVPNSRLRYYCIAKRNNT 602
V+ GVP SR R + +A + T
Sbjct: 188 VNYGVPQSRERVFLLASIDGT 208
>UniRef50_A0FZN6 Cluster: Cytosine-specific methyltransferase; n=1;
Burkholderia phymatum STM815|Rep: Cytosine-specific
methyltransferase - Burkholderia phymatum STM815
Length = 356
Score = 50.0 bits (114), Expect = 6e-05
Identities = 43/174 (24%), Positives = 78/174 (44%), Gaps = 9/174 (5%)
Frame = +3
Query: 105 ILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIE- 281
++ ++G GG ++ + ++ A++ N + NFP L +I L+ +
Sbjct: 25 VVSTFAGCGGSSLGYSMAGFDERL--AVEWNEKQAASFVANFPHVPLHLGDIADLSDADA 82
Query: 282 -----IEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMEN 446
+E ++D SPPCQ F+ G + D R F+ ++ +L ++ MEN
Sbjct: 83 LRMARLEPGELDVFDGSPPCQGFSLAGARKFQ-DGRNQLFIEYVRLLRTFAPKAFV-MEN 140
Query: 447 VKGFECSTVRNLFVE---KLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNN 599
V+G +R +F + +L CG+ +L+ GVP R R I RN+
Sbjct: 141 VRGMVVGKMRLIFADILNELKGCGYTVCARVLTAGYYGVPQMRPRMIFIGIRND 194
>UniRef50_Q59606 Cluster: Modification methylase NgoFVII; n=9;
Bacteria|Rep: Modification methylase NgoFVII - Neisseria
gonorrhoeae
Length = 374
Score = 50.0 bits (114), Expect = 6e-05
Identities = 46/216 (21%), Positives = 94/216 (43%), Gaps = 4/216 (1%)
Frame = +3
Query: 69 VSSTMEEKMEHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLF 248
+S+ + +IL L+SG GG+ ++++ + V A D + A + ++ N + ++
Sbjct: 6 ISNLNSSSNKPKILSLFSGCGGLDLGFHQAGC--ETVWANDFSHWACESFRKNIGDVIV- 62
Query: 249 TKNIQSLTPIEIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQ 428
+I+ + P + D +L PCQ F+ K R N + F+ ++
Sbjct: 63 EGDIEQINPNDPTIPDCDIILGGFPCQDFSMIWKQPGLEGERGNLYKSFLRFVNAKKPKV 122
Query: 429 YILMENVKGFECSTVRNLFVEKLT---YCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNN 599
++ ENVKG + + + +T CG+ Q + + GVP R R + R +
Sbjct: 123 FV-AENVKGLLTANKKKAIQQIITDFENCGYYVQANVYNFAEFGVPQFRERVLIVGVRLD 181
Query: 600 T-WNFKRKDELITCLPKTFAKPHCLKDIIENNVPDD 704
T ++F+ + + KP+ +N+P +
Sbjct: 182 TGFDFRHPEPTHNETGENGLKPYVTAGQAISNIPQN 217
>UniRef50_Q9RPJ2 Cluster: Cytosine-specific methyltransferase; n=1;
Escherichia coli|Rep: Cytosine-specific
methyltransferase - Escherichia coli
Length = 414
Score = 49.6 bits (113), Expect = 8e-05
Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 7/125 (5%)
Frame = +3
Query: 102 RILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIE 281
+ + L+SG G+ E+ + +VA ++ + A K N P +F +I T E
Sbjct: 5 KFISLFSGAMGLDLGLEEAGFE--LVACVEQDKAALKTIKTNKPNLAVFEGSIVDCTGSE 62
Query: 282 I-------EKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILM 440
+ +K +ID V PPCQ F+ G L D R ++ ++ +LN ++ M
Sbjct: 63 LLALAGVNDKEEIDLVAGGPPCQAFSVFGNRLGLEDARGQLIFEYVRMIKELNPKVFV-M 121
Query: 441 ENVKG 455
ENV+G
Sbjct: 122 ENVRG 126
>UniRef50_Q307B3 Cluster: Cytosine-specific methyltransferase; n=1;
Arthrospira platensis|Rep: Cytosine-specific
methyltransferase - Spirulina platensis
Length = 411
Score = 49.6 bits (113), Expect = 8e-05
Identities = 45/175 (25%), Positives = 75/175 (42%), Gaps = 13/175 (7%)
Frame = +3
Query: 108 LELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIEIE 287
++L++G GGM + V A++ + V V+ +NFP +I + EI
Sbjct: 8 IDLFAGCGGMSLGLEAAGFD--VAVAVEFDAVHCLVHHFNFPYCHTICGDISQVKSAEIL 65
Query: 288 -----KY---KIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILME 443
KY ++D + PPCQ F+ GK +DPR + ++ ++ ++ +Y + E
Sbjct: 66 DQLQLKYGHTEVDLIAGGPPCQGFSHIGKR-QLDDPRNSLVFEYLRMIAEIQP-KYFIFE 123
Query: 444 NVKGFECSTVRNLFVEKLT-YCGFVYQE----FMLSPVSVGVPNSRLRYYCIAKR 593
NV G + E +T + G YQ +L G P R R I R
Sbjct: 124 NVPGIATGKHKRFLDEIITEFEGIGYQVKKPIKILDASEYGAPQKRKRLILIGSR 178
>UniRef50_O30877 Cluster: Cytosine-specific methyltransferase; n=2;
Bacteria|Rep: Cytosine-specific methyltransferase -
Bacillus stearothermophilus (Geobacillus
stearothermophilus)
Length = 375
Score = 49.2 bits (112), Expect = 1e-04
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Frame = +3
Query: 300 DTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENV---KGFECST 470
D V PPCQ F++ GK NDPR N ++ ++K+N + +MENV KG +
Sbjct: 237 DIVFGGPPCQAFSQAGKQKATNDPRGNLIYEYLRFIEKINP-PFFVMENVANLKGVQRGE 295
Query: 471 VRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLR 572
+ +E+++ G+ L G P R R
Sbjct: 296 LYQDILERMSNLGYNVTVAPLLAADYGAPQLRKR 329
>UniRef50_O31073 Cluster: Modification methylase SacI; n=1;
Streptomyces achromogenes|Rep: Modification methylase
SacI - Streptomyces achromogenes
Length = 390
Score = 49.2 bits (112), Expect = 1e-04
Identities = 47/187 (25%), Positives = 79/187 (42%), Gaps = 23/187 (12%)
Frame = +3
Query: 105 ILELYSGIGGMHCAWNE----------STIKGKVVAAIDINTVANDVYKYNFPETLLFTK 254
++ L+SG GG+ CA S +V A D A D NFP T
Sbjct: 7 VISLFSGAGGLDCAIESCAEPPLVQDGSGSPLRVAVATDYEQTALDTLSANFPHTKTLCG 66
Query: 255 NIQSLTPIEI------EKYKIDTVLMSPPCQPFTRNGKNLDEN----DPRTNSFLYFIDI 404
+IQ++ E+ + V+ PPC PF+++G ++E DP + ++ +
Sbjct: 67 DIQTIPTAELLEAGGLKPGDPTLVIGGPPCTPFSKSGFWIEEKRNSADPNASLLDEYVRV 126
Query: 405 LDKLNTLQYILMENVKGFECSTVRNLF---VEKLTYCGFVYQEFMLSPVSVGVPNSRLRY 575
+ + +IL ENV+G T + F + L G+ +L GVP R R
Sbjct: 127 VRESKPEAFIL-ENVQGLTYKTHQAQFDRLIAGLKDAGYNPTFRVLLAAEYGVPQLRRRV 185
Query: 576 YCIAKRN 596
+ + +R+
Sbjct: 186 FVVGRRD 192
>UniRef50_UPI00015B46FB Cluster: PREDICTED: similar to DNA
(cytosine-5)-methyltransferase; n=2; Nasonia
vitripennis|Rep: PREDICTED: similar to DNA
(cytosine-5)-methyltransferase - Nasonia vitripennis
Length = 1392
Score = 48.8 bits (111), Expect = 1e-04
Identities = 49/179 (27%), Positives = 81/179 (45%), Gaps = 17/179 (9%)
Frame = +3
Query: 102 RILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIE 281
R L++++G GG+ ++ + + + AI+ +T A Y+ N P+ +FT + S
Sbjct: 919 RTLDVFAGCGGLSEGLKQAGV-AESLWAIENDTAAAHAYRLNNPKASVFTTDCNSFLEKV 977
Query: 282 I------------EKYKIDTVLMSPPCQPFT-RNGKNLDENDPRTNSFLY-FIDILDKLN 419
I +K ++D + PPCQ F+ N N NS + FI D
Sbjct: 978 INGETSLGGQSLPKKGEVDLLCGGPPCQGFSGMNRFNSRAYSSFKNSLIVSFISFCDYYK 1037
Query: 420 TLQYILMENVK---GFECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIA 587
++ LMENV+ F+ S V L + L+ G+ +L S G+P +R R IA
Sbjct: 1038 P-RFFLMENVRNFVSFKKSAVLKLTLSCLSRMGYQCTFGILQAGSYGIPQTRRRMILIA 1095
>UniRef50_Q6UQ61 Cluster: TspRI methylase; n=1; Thermus sp. R|Rep:
TspRI methylase - Thermus sp. R
Length = 431
Score = 48.8 bits (111), Expect = 1e-04
Identities = 40/180 (22%), Positives = 79/180 (43%), Gaps = 7/180 (3%)
Frame = +3
Query: 75 STMEEKMEHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTK 254
S++ ++ +++L+SG GG + ++ + +DI TVA + + P
Sbjct: 59 SSLRDEGRLILVDLFSGAGGFSVGFEQAGFVSAL--GLDIYTVAAKTFMEHHPRAGFILG 116
Query: 255 NIQSLTP---IE-IEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNT 422
+ +++TP +E + + V PCQ F+ + ++ DPR F FI + L+
Sbjct: 117 DARAVTPEMLLEALNGLRPHVVTGGVPCQRFSLTNRKRNDEDPRNYLFREFIRLARFLDP 176
Query: 423 LQYILMENVKGFECSTVRNLFVE---KLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKR 593
+++ENV G + +E + G+ +L+ GVP R R + + R
Sbjct: 177 -DVLIVENVSGIRSAANGKFVLEIVRAMEEAGYRAHVEVLNAADFGVPQHRKRIFFVGVR 235
>UniRef50_A6W3J0 Cluster: Cytosine-specific methyltransferase; n=3;
Bacteria|Rep: Cytosine-specific methyltransferase -
Marinomonas sp. MWYL1
Length = 417
Score = 48.8 bits (111), Expect = 1e-04
Identities = 36/123 (29%), Positives = 60/123 (48%)
Frame = +3
Query: 87 EKMEHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQS 266
E R ++L++GIGG+ + ++ G V + + + A YK N E +I
Sbjct: 92 EDSSFRFIDLFAGIGGVRLGFQQAG--GTCVFSSEFDKHAQLTYKKNHGEFPF--GDITL 147
Query: 267 LTPIEIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMEN 446
++P I + D +L PCQPF+ G L D R F I+++ N ++ ++EN
Sbjct: 148 ISPESIPAH--DVLLAGFPCQPFSHAGLKLGIEDTRGTLFHDIARIIEEKNP-RFAVLEN 204
Query: 447 VKG 455
VKG
Sbjct: 205 VKG 207
>UniRef50_Q59995 Cluster: Cytosine-specific methyltransferase; n=1;
Synechocystis sp. PCC 6803|Rep: Cytosine-specific
methyltransferase - Synechocystis sp. (strain PCC 6803)
Length = 424
Score = 48.4 bits (110), Expect = 2e-04
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 8/138 (5%)
Frame = +3
Query: 108 LELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIEIE 287
++L++G GGM + + AA++ + V V+ +NFP + ++I ++ EI
Sbjct: 7 IDLFAGCGGMSLGLEAAGFD--IAAAVEFDAVHCLVHHHNFPYGVTICRDIALVSAGEIL 64
Query: 288 K------YK--IDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILME 443
+ Y ID + PPCQ F+ GK +DPR + ++ ++ L +Y L E
Sbjct: 65 RKLNNKGYSSDIDLIAGGPPCQGFSLMGKR-QLDDPRNSLVFEYVRMIRDLKP-KYFLFE 122
Query: 444 NVKGFECSTVRNLFVEKL 497
NV G S F+E+L
Sbjct: 123 NVPGMR-SGQHKKFLEEL 139
>UniRef50_Q184Y5 Cluster: Cytosine-specific methyltransferase; n=1;
Clostridium difficile 630|Rep: Cytosine-specific
methyltransferase - Clostridium difficile (strain 630)
Length = 541
Score = 48.4 bits (110), Expect = 2e-04
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 3/121 (2%)
Frame = +3
Query: 99 HRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPI 278
+ +++L++G GG+ + E T K +VA ++ N A Y N P + +I+ L
Sbjct: 2 YNVIDLFAGAGGLSLGF-EMTKKFNMVAFVEKNDNAAKTYLENHPSVKRYC-DIKRLDFQ 59
Query: 279 EIEKY--KIDTVLMSPPCQPFTRNGKNLDENDPRTNSFL-YFIDILDKLNTLQYILMENV 449
+I KID V+ PPCQ F+ + + N + ++D +DKL ++ MENV
Sbjct: 60 DILNSVDKIDVVIGGPPCQGFSNANRQKRKIINGNNELVKLYVDAIDKLKPNVFV-MENV 118
Query: 450 K 452
K
Sbjct: 119 K 119
>UniRef50_Q855N3 Cluster: Gp80; n=3; root|Rep: Gp80 - Mycobacterium
phage Che9d
Length = 252
Score = 48.0 bits (109), Expect = 3e-04
Identities = 39/169 (23%), Positives = 77/169 (45%), Gaps = 4/169 (2%)
Frame = +3
Query: 105 ILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIE- 281
+L L+SGIGG+ + + VV ++IN + ++P ++ T +E
Sbjct: 3 VLSLFSGIGGLELGLERAGM--TVVGQVEINPYCRQILAKHWPHV---PRHDDVRTTVEW 57
Query: 282 ---IEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVK 452
E+ ++D + PCQ + G P+++ + + + + +Y+L+ENV
Sbjct: 58 WESEERPRVDLICGGFPCQDISNAGARKGITGPKSSLWGGMLHTVRNIRP-RYVLIENVA 116
Query: 453 GFECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNN 599
V + + L GF + +LS ++G P++R R + +A NN
Sbjct: 117 ALLVRGVDTVLAD-LHESGFNAEWSVLSACAMGAPHTRERLFILAYPNN 164
>UniRef50_UPI0000DAF8EF Cluster: modification methylase HaeIII
(Cytosine-specificmethyltransferase HaeIII; M.HaeIII);
n=1; Campylobacter concisus 13826|Rep: modification
methylase HaeIII (Cytosine-specificmethyltransferase
HaeIII; M.HaeIII) - Campylobacter concisus 13826
Length = 388
Score = 47.2 bits (107), Expect = 4e-04
Identities = 47/192 (24%), Positives = 83/192 (43%), Gaps = 24/192 (12%)
Frame = +3
Query: 96 EHRILELYSGIGGMHCAWNESTIKGKVVAAID---INTVANDVYKYNFPE--------TL 242
+H ++L++G GGM + + +D T+ + Y + E T
Sbjct: 3 KHTFIDLFAGAGGMAEGFYQEGYMALTHIELDKYACLTLQERMRHYGYHENEINKIKPTD 62
Query: 243 LFTKNIQSLTPIEIEKYK-IDTVLMSPPCQPFTRNGKNLD----ENDPRTNSFLYFIDIL 407
+ KNI S+ I K ID ++ PPCQ F+ +GK D + DPR + +++IL
Sbjct: 63 ITDKNIISIIESNIGKTSDIDVIIGGPPCQSFSSHGKARDPFSMKKDPRNYLYENYLNIL 122
Query: 408 DKLNTLQYILMENVKGFECSTVRNLFVEKLTYCGF-----VYQE---FMLSPVSVGVPNS 563
+ ++ + ENV G + ++ + K + G + + +L+ V GVP
Sbjct: 123 NYFKP-KFFVFENVSGILSTKIKGKSIIKDIFDGMKKNYNIIENKDMILLNAVDFGVPQD 181
Query: 564 RLRYYCIAKRNN 599
R R I R +
Sbjct: 182 RKRIIIIGTRKD 193
>UniRef50_Q89YH8 Cluster: Cytosine-specific methyltransferase; n=1;
Bacteroides thetaiotaomicron|Rep: Cytosine-specific
methyltransferase - Bacteroides thetaiotaomicron
Length = 402
Score = 47.2 bits (107), Expect = 4e-04
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 9/117 (7%)
Frame = +3
Query: 294 KIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKGFECSTV 473
K+D V+ PPCQ F+ G+ END R N +I + + + I ENVKGF
Sbjct: 82 KVDLVVGGPPCQGFSMAGRR-KENDQRNNLVKSYIKFIKTIQP-KIIFFENVKGFTLEFR 139
Query: 474 RN--------LFVEK-LTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNNTWNFKR 617
+N +VE+ L G+ + +++ G+P R R+ + R + N +
Sbjct: 140 KNKDKGKEYSSYVERALNRAGYYVKGELVNFGEYGIPQKRTRFILVGVRKDVPNVSK 196
>UniRef50_Q28NA6 Cluster: Cytosine-specific methyltransferase; n=2;
Rhodobacteraceae|Rep: Cytosine-specific
methyltransferase - Jannaschia sp. (strain CCS1)
Length = 373
Score = 47.2 bits (107), Expect = 4e-04
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 10/177 (5%)
Frame = +3
Query: 93 MEHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLT 272
M + ++L+ G GG+ + V+A D+ A ++ P + I+ L+
Sbjct: 1 MTYTAIDLFCGAGGLSAGLEMAGFT--VLAGNDLFDAAGRTFEATHPRAKFISGPIEELS 58
Query: 273 P---IEI---EKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYI 434
+E+ K ++ ++ PPCQ ++ +D R + F ++ I+D L ++I
Sbjct: 59 VERLMEVTGLRKGELSVLVGGPPCQAYSVYNHQRGMHDARASLFREYLRIVDGLRP-EWI 117
Query: 435 LMENVKGF----ECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKR 593
+MENV G VR + E G+ ++ +L GVP R R I R
Sbjct: 118 VMENVTGIYSIANGEAVRAIKAE-FAALGYAVEDAVLRAEDYGVPQERRRVVFIGNR 173
>UniRef50_Q97JQ1 Cluster: Cytosine-specific methyltransferase; n=1;
Clostridium acetobutylicum|Rep: Cytosine-specific
methyltransferase - Clostridium acetobutylicum
Length = 314
Score = 46.4 bits (105), Expect = 8e-04
Identities = 42/178 (23%), Positives = 82/178 (46%), Gaps = 9/178 (5%)
Frame = +3
Query: 81 MEEKMEHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLF-TKN 257
MEE + + LEL+ GIG A+ I K + ++I+ Y F + L++ T+N
Sbjct: 1 MEENIIIKTLELFGGIGAPRKAFKNIGIDIKAIDYVEIDPKPVKTYNEMFKKDLMYKTQN 60
Query: 258 IQSLTPIEIEKYKIDTVLMSPPCQPFTRNG--KNLDENDPRTNSFLY-FIDILDKLNTL- 425
+ K D ++ PCQ F+ G K ++ +S ++ I I+ ++
Sbjct: 61 VIGY------NLKPDVLIHGSPCQDFSIAGYQKGAEQGSETRSSLMWETISIIKQMGIWK 114
Query: 426 -QYILMENVKGFECSTVRNLF---VEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIA 587
+ ++ ENVK +++ F +E++ G+ +L+ + G+P R R + I+
Sbjct: 115 PRVVVWENVKNVLSKHMKHNFDKYLEEMKKMGYTNNYEILNAMDFGLPQRRERVFTIS 172
>UniRef50_A3VJB1 Cluster: Cytosine-specific methyltransferase; n=1;
Rhodobacterales bacterium HTCC2654|Rep:
Cytosine-specific methyltransferase - Rhodobacterales
bacterium HTCC2654
Length = 336
Score = 46.4 bits (105), Expect = 8e-04
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Frame = +3
Query: 282 IEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKG-- 455
++K ++D V PPCQ F+ N +D R + FL F+ +D+ + +L+ENV G
Sbjct: 3 LKKGELDLVAGGPPCQGFSINAPKRSADDDRNSLFLEFLRFVDEFEP-KAVLIENVPGLV 61
Query: 456 -FECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNN 599
FE + L + G+ +L GVP +R R I R +
Sbjct: 62 SFEGGGTLQAILLALGHHGYSADVKILYAPHFGVPQTRWRTVIIGIRGD 110
>UniRef50_O13369 Cluster: Cytosine-specific methyltransferase; n=1;
Ascobolus immersus|Rep: Cytosine-specific
methyltransferase - Ascobolus immersus
Length = 537
Score = 46.4 bits (105), Expect = 8e-04
Identities = 37/162 (22%), Positives = 68/162 (41%), Gaps = 4/162 (2%)
Frame = +3
Query: 111 ELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIEIE- 287
+ + G GG+ ++ ++ K A D+N A Y+ NFP T F + + +
Sbjct: 231 DTFCGGGGVSLGARQAGLEVKW--AFDMNPNAGANYRRNFPNTDFFLAEAEQFIQLSVGI 288
Query: 288 KYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKGFECS 467
+D + +SPPCQ F+R +ND + + + L K + +E G
Sbjct: 289 SQHVDILHLSPPCQTFSRAHTIAGKNDENNEASFFAVVNLIKAVRPRLFTVEETDGIMDR 348
Query: 468 TVRNLF---VEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCI 584
R + +T G+ ++ +L+ + GV +R R I
Sbjct: 349 QSRQFIDTALMGITELGYSFRICVLNAIEYGVCQNRKRLIII 390
>UniRef50_Q8RNY3 Cluster: Cytosine-specific methyltransferase; n=1;
Hafnia alvei|Rep: Cytosine-specific methyltransferase -
Hafnia alvei
Length = 1061
Score = 46.0 bits (104), Expect = 0.001
Identities = 57/233 (24%), Positives = 104/233 (44%), Gaps = 27/233 (11%)
Frame = +3
Query: 108 LELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFP-----------ETLLFTK 254
++++ G GG+ + +VAAID N+ A D Y +N P T +F +
Sbjct: 812 VDVFCGAGGLSLGLESAG--WNIVAAIDNNSDALDTYCFNRPCDLEPDNAQEGRTAVFKR 869
Query: 255 NIQS-------LTPIE--IEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDIL 407
++Q +T IE + K+D ++ PPCQ F+ G L + D R + ++
Sbjct: 870 DLQERREFEDVVTRIETGLGSTKLDLLVGGPPCQGFSHAGYRLSD-DKRNDLASIYLHFA 928
Query: 408 DKLNTLQYILMENVKGF----ECSTVRNL--FVEKLTYCGFVYQEFMLSPVSVGVPNSRL 569
++L +IL ENV+G + T+R++ +++L Y + + L GVP R
Sbjct: 929 ERLRPRIFIL-ENVEGLATFNKGQTLRDICTTLQELGYRVNI-PVWKLCSEQYGVPQMRR 986
Query: 570 RYYCIAKRNNTWNFKRKDELI-TCLPKTFAKPHCLKDIIENNVPDDYLVPDKM 725
R + +A ++T + + C + K D+ N+P + V D +
Sbjct: 987 RIFVVATTDDTIDLSEPAPIYERCAGR--RKNKIKTDLFSTNLPAPFTVLDAL 1037
>UniRef50_Q88FU3 Cluster: DNA-cytosine methyltransferase; n=1;
Pseudomonas putida KT2440|Rep: DNA-cytosine
methyltransferase - Pseudomonas putida (strain KT2440)
Length = 348
Score = 45.6 bits (103), Expect = 0.001
Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 16/175 (9%)
Frame = +3
Query: 102 RILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIE 281
+++ L+ G GG+ + ++ VV A D + A + Y +N P ++ +P E
Sbjct: 24 KLVSLFCGAGGLDLGFIDAGFD--VVFAADHDRYAVETYNHNHPGQRASKVDLLETSPEE 81
Query: 282 IEKYK---------IDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILD---KLNTL 425
+ K I ++ PPCQ F+R +DPR + + DI++ K + +
Sbjct: 82 LYKRSVLEPGFEGAIHGIIGGPPCQGFSRANTARCHSDPRNQLAVKYADIVNYFYKHSRI 141
Query: 426 QYILMENVKGFECSTVRNL-FVEKL---TYCGFVYQEFMLSPVSVGVPNSRLRYY 578
++ L ENV E +N F+E L FV E ++ GV R RY+
Sbjct: 142 KFFLFENVP--EILAKKNADFLEMLRARLSKNFVVYEKEINSSGFGVAQHRRRYF 194
>UniRef50_Q70C77 Cluster: Cytosine-specific methyltransferase; n=1;
Streptococcus thermophilus|Rep: Cytosine-specific
methyltransferase - Streptococcus thermophilus
Length = 515
Score = 45.6 bits (103), Expect = 0.001
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 19/120 (15%)
Frame = +3
Query: 297 IDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKG------- 455
ID + PPCQ F+R GK D +DPR F ++ I+ + +Y++MENV G
Sbjct: 87 IDVIFGGPPCQGFSRLGKR-DASDPRNMLFHEYLRIIRDVRP-KYVVMENVTGILDMLML 144
Query: 456 -----------FECSTVRNLFVEKLTYCGFVYQEF-MLSPVSVGVPNSRLRYYCIAKRNN 599
F V+ + E+L G++ + +L+ + GVP R R +A RN+
Sbjct: 145 DFPSVVKDESYFGQRLVKEILREELQELGYILLDVQVLNSANFGVPQQRNRVVFLAYRND 204
>UniRef50_Q0AMN2 Cluster: DNA (Cytosine-5-)-methyltransferase
precursor; n=2; Proteobacteria|Rep: DNA
(Cytosine-5-)-methyltransferase precursor - Maricaulis
maris (strain MCS10)
Length = 375
Score = 45.6 bits (103), Expect = 0.001
Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 4/121 (3%)
Frame = +3
Query: 105 ILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNF----PETLLFTKNIQSLT 272
I++L+ G GG+ + + A+D++ Y+ NF E L K +
Sbjct: 3 IVDLFCGCGGLSLGAHYAGFN--TALAVDVDNDLRSAYRRNFGVGNAEKLDLAKTKAATL 60
Query: 273 PIEIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVK 452
+ + V+ PPCQ F+ G+++D+ DPR N + FI++ L ++ +MENV
Sbjct: 61 KRKSGPERPVGVIGGPPCQGFSVMGRSIDD-DPRNNLAVRFIELTAALGP-KFFVMENVP 118
Query: 453 G 455
G
Sbjct: 119 G 119
>UniRef50_A3N1K4 Cluster: Modification methylase; n=5; Bacteria|Rep:
Modification methylase - Actinobacillus pleuropneumoniae
serotype 5b (strain L20)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 45/188 (23%), Positives = 83/188 (44%), Gaps = 12/188 (6%)
Frame = +3
Query: 66 NVSSTMEEKMEHRI--LELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPET 239
++ M E M ++ ++ + G GGM ++ I+ ++A ID + Y+ N
Sbjct: 6 HIEFNMVENMMKQLKAVDFFCGGGGMSYGLQKAGIR--ILAGIDYEINCKETYETNIKGA 63
Query: 240 LLFTKNIQSLTPIEIEKY-----KIDTVLM--SPPCQPFTRNGKNLDENDPRTNSFLYFI 398
N+ LT E+EK K D +++ PCQ ++ + E ++ S L
Sbjct: 64 SFIHANVFELTEKELEKTLDISRKDDNLILVGCSPCQYWSVI-RTSKEKSEKSKSLLSEF 122
Query: 399 DILDKLNTLQYILMENVKGF---ECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRL 569
+ Y+++ENV G + + ++FV +L G+ + + + GVP SR
Sbjct: 123 QRFVEYFVPGYVVVENVPGIFTRQEESGLDIFVRRLEELGYTVHFGIHNTKNYGVPQSRK 182
Query: 570 RYYCIAKR 593
R+ IA R
Sbjct: 183 RFTLIANR 190
>UniRef50_Q8JKX6 Cluster: Putative C5-cytosine methyltransferase;
n=1; Natrialba phage PhiCh1|Rep: Putative C5-cytosine
methyltransferase - Natrialba phage PhiCh1
Length = 283
Score = 44.8 bits (101), Expect = 0.002
Identities = 47/181 (25%), Positives = 74/181 (40%), Gaps = 19/181 (10%)
Frame = +3
Query: 108 LELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNF----------PETLLFTKN 257
+ L+SGIGG ++ + K V A++ N A D Y+ N +L ++
Sbjct: 32 VSLFSGIGGFDLGFSRAGFKNLV--AVEANQDAADTYRANLINDCENYGQDEPPVLMERD 89
Query: 258 IQSLTPIEIEKY------KIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLN 419
I + EI + ++ V PPCQ F+ GK +E+DPR +L + I+ +
Sbjct: 90 ITKVATWEILEAAGIGVGQLTAVSGGPPCQGFSHIGKR-EEDDPRNELYLEMVRIVHQAK 148
Query: 420 TLQYILMENVKGFECSTVRNLFV---EKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAK 590
+ + +MENV G + E G+ GVP R R I K
Sbjct: 149 PV-FFVMENVPGLATMHDGEAIMEVCENFEAGGYEVTWDKHDAADYGVPQHRERVLVIGK 207
Query: 591 R 593
R
Sbjct: 208 R 208
>UniRef50_Q5WE27 Cluster: Cytosine-specific methyltransferase; n=1;
Bacillus clausii KSM-K16|Rep: Cytosine-specific
methyltransferase - Bacillus clausii (strain KSM-K16)
Length = 286
Score = 44.8 bits (101), Expect = 0.002
Identities = 42/170 (24%), Positives = 81/170 (47%), Gaps = 6/170 (3%)
Frame = +3
Query: 108 LELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIEIE 287
+EL++GIGG+ A + I+ VA + + ++P+ +F +I++L +E
Sbjct: 4 IELFAGIGGIALAAEWAGIE--TVAFCEREPFCQKILNKHWPDVPIFD-DIKTLDKKALE 60
Query: 288 KYKIDT-----VLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVK 452
+ ID + PCQP++ GK D R + + I++++ +++ ENV
Sbjct: 61 ERGIDVGAIELITGGFPCQPYSVAGKRKGTEDDR-DLWPEMFRIIEEIRP-TWVVGENVA 118
Query: 453 GF-ECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNN 599
F R LF L G+ + F+L +V P+ R+R + ++ N+
Sbjct: 119 NFANMELDRTLF--DLESIGYKGRAFVLPAAAVEAPHERMRTFIVSHSNS 166
>UniRef50_Q5HMV5 Cluster: DNA-cytosine methyltransferase; n=1;
Staphylococcus epidermidis RP62A|Rep: DNA-cytosine
methyltransferase - Staphylococcus epidermidis (strain
ATCC 35984 / RP62A)
Length = 335
Score = 44.8 bits (101), Expect = 0.002
Identities = 49/209 (23%), Positives = 95/209 (45%), Gaps = 8/209 (3%)
Frame = +3
Query: 102 RILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVY--KYNFPETLLFTKNIQSLTP 275
++LEL+SG+G + N I+ ++V + A ++ +N E+ +N+ +
Sbjct: 6 KVLELFSGVGSFSISLNTLGIEHEIVGFSETRKTATQLFCKLHNKKES----ENLGDVRN 61
Query: 276 IEIEKYKIDTVLMSPPCQPFTRNGK---NLDENDPRTNSFLYFIDILDKLNTLQYILMEN 446
+ + +D ++ PCQ FTR GK L +D R+ + I+++ ++I+ EN
Sbjct: 62 VSAKDLDVDLLVFGSPCQSFTRAGKQGGGLKGSDTRSALMWEAVRIMEECKP-KWIVWEN 120
Query: 447 V-KGFECSTVRNL--FVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNNTWNFKR 617
V + N ++++L + +L+ +G R R + I+ R + N K
Sbjct: 121 VPDAISRKNMPNFQNYMDELDSLNYNTYYKVLNAHELGSAQKRKRLFSISIRKDIDNGKF 180
Query: 618 KDELITCLPKTFAKPHCLKDIIENNVPDD 704
+ +T PK H L+ +ENN D
Sbjct: 181 EFLDLTREPK-----H-LETYLENNDQPD 203
>UniRef50_A7H0V8 Cluster: Cytosine-specific methyltransferase NlaX;
n=1; Campylobacter curvus 525.92|Rep: Cytosine-specific
methyltransferase NlaX - Campylobacter curvus 525.92
Length = 352
Score = 44.8 bits (101), Expect = 0.002
Identities = 41/161 (25%), Positives = 67/161 (41%), Gaps = 4/161 (2%)
Frame = +3
Query: 114 LYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFP-ETLLFTKNIQSLTPIEIEK 290
++SGIG A E + + A +I+ A Y N + F NI+ L +I
Sbjct: 11 IFSGIGSAEFAAREVFAEYDMAFACEIDKFARQSYLANHAIDEKHFHCNIKELDA-KIYT 69
Query: 291 YKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKGFECST 470
K+D ++ PCQ F+ G R F+ I+ + ++ ENVKGF
Sbjct: 70 DKVDVLIGGSPCQDFSLAGLRAGTEGERGELIYEFVRIVRECRPKVFV-YENVKGFLSIG 128
Query: 471 VRNLFVE---KLTYCGFVYQEFMLSPVSVGVPNSRLRYYCI 584
+VE L G+ + +L+ G+ +R R Y +
Sbjct: 129 KGRAYVEFKMALRDLGYYIHDGVLNTKDYGIAQNRERIYIV 169
>UniRef50_P06530 Cluster: Modification methylase BsuRI; n=4;
Bacilli|Rep: Modification methylase BsuRI - Bacillus
subtilis
Length = 436
Score = 44.8 bits (101), Expect = 0.002
Identities = 54/177 (30%), Positives = 75/177 (42%), Gaps = 6/177 (3%)
Frame = +3
Query: 189 DINTVANDVYKYNFPETLLFTKNIQSLTPIEIEKY--KIDTVLMSPPCQPFTRNGKNLDE 362
D+ AN YK NFP + IQ I KY K + +L PC F+ G L +
Sbjct: 115 DLFKEANQTYKTNFPGHV-----IQHEKDIRQVKYFPKCNLILGGFPCPGFSEAGPRLID 169
Query: 363 NDPRTNSFLYFIDILDKLNTLQYILMENVKGFEC---STVRNLFVEKLTYCGFVYQEFML 533
+D R +L+FI L + + + ENVKG V N +E G+ Q +L
Sbjct: 170 DD-RNFLYLHFIRSLIQAQP-EIFVAENVKGMMTLGKGEVLNQIIEDFASAGYRVQFKLL 227
Query: 534 SPVSVGVPNSRLRYYCIAKRNNTWNFKRKDELITCLPKTFAKP-HCLKDIIENNVPD 701
+ GVP R R R + +F K T +T KP L+D I + V D
Sbjct: 228 NARDYGVPQLRERVIIEGVRKDI-SFNYKYPSPTHGEETGLKPFKTLRDSIGDLVTD 283
>UniRef50_A6U8S5 Cluster: Cytosine-specific methyltransferase; n=1;
Sinorhizobium medicae WSM419|Rep: Cytosine-specific
methyltransferase - Sinorhizobium medicae WSM419
Length = 632
Score = 44.4 bits (100), Expect = 0.003
Identities = 29/117 (24%), Positives = 59/117 (50%)
Frame = +3
Query: 105 ILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIEI 284
++E+ +G GGM + + VA ++ + A + N + + ++++++
Sbjct: 282 VVEICAGAGGMSLGLERAGFEH--VALVEYDNHAAATLRRNRRDWTVIREDVRTMDFRLY 339
Query: 285 EKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKG 455
+ +ID V PPCQP++ +G L + DPR + + I+D++ + L ENV G
Sbjct: 340 RQLEIDLVSGGPPCQPYSSDGYGLGKEDPR-DLLPECVRIVDEIKPKAF-LFENVDG 394
>UniRef50_Q57983 Cluster: Probable modification methylase MJ0563;
n=2; Euryarchaeota|Rep: Probable modification methylase
MJ0563 - Methanococcus jannaschii
Length = 310
Score = 44.4 bits (100), Expect = 0.003
Identities = 33/129 (25%), Positives = 64/129 (49%), Gaps = 14/129 (10%)
Frame = +3
Query: 105 ILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIEI 284
+++L+SG GG + + + ++ AI+ Y YN + ++ +I+ + P
Sbjct: 3 VIDLFSGCGGFSKGFLDENFR--ILGAIENFKPVVKTYLYNI-KAPVWMDDIKRIPPKAF 59
Query: 285 EKY----KIDTVLMSPPCQPFTRNGKNLDEN-------DPRTNSFLYFIDILD---KLNT 422
+++ K+D ++ SPPC+PFT+ K + +N D LY+ID ++ + N
Sbjct: 60 DEFIKNEKVDVIIGSPPCEPFTKANKLIKDNPLDRLYKDKVGRLVLYYIDYVNYFTQRND 119
Query: 423 LQYILMENV 449
+MENV
Sbjct: 120 DLIFVMENV 128
>UniRef50_Q8YKD1 Cluster: Site-specific DNA-methyltransferase; n=4;
Nostocaceae|Rep: Site-specific DNA-methyltransferase -
Anabaena sp. (strain PCC 7120)
Length = 253
Score = 44.0 bits (99), Expect = 0.004
Identities = 42/171 (24%), Positives = 77/171 (45%), Gaps = 3/171 (1%)
Frame = +3
Query: 105 ILELYSGIGGM-H--CAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTP 275
IL L+SGIGG+ H A + K +V ++I+ + ++ P+T + + +T
Sbjct: 4 ILSLFSGIGGLCHHGIAAAGLSHKFQVKQFVEISPYSQSRLRHEQPQTPIHS----DITT 59
Query: 276 IEIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKG 455
+ + D V PCQ + G +DPR+ + I++ + L+EN G
Sbjct: 60 YHCHRGQFDIVAGGLPCQGTSNAGNRQGLDDPRSALWAEQFRIIES-DRPAIALIENPTG 118
Query: 456 FECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNNTWN 608
+ + + L G++ + +S VG+P+ R R + IA N +N
Sbjct: 119 LLYRGLEQIICD-LDSIGYMGEWNCISAQQVGLPHQRKRIFIIAYSNGLFN 168
>UniRef50_Q64WM8 Cluster: Site-specific DNA-methyltransferase; n=1;
Bacteroides fragilis|Rep: Site-specific
DNA-methyltransferase - Bacteroides fragilis
Length = 296
Score = 44.0 bits (99), Expect = 0.004
Identities = 44/168 (26%), Positives = 74/168 (44%), Gaps = 6/168 (3%)
Frame = +3
Query: 105 ILELYSGIGGMHCAWNES--TIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPI 278
+LEL+SGIGG + T + ID + +AN +KYNFP + ++I ++T I
Sbjct: 3 LLELFSGIGGFSKGLEAAGYTFDKVYFSEIDKHAIAN--FKYNFP----YAEHIGTVTNI 56
Query: 279 -EIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKG 455
E+ + V PCQ F+ G ++ Y ++ + + + ENVKG
Sbjct: 57 GEVGIERPHIVTFGSPCQNFSAIGDGKGLQGGESHLVRYAVEAVRRFRP-DVFIWENVKG 115
Query: 456 FECSTVRNLF---VEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAK 590
+ R F V+ G E+ L + +P +R R Y + +
Sbjct: 116 IFFARHRPDFWSIVKAFADIGGYRLEWQLFNTAWFLPQNRERMYLVGR 163
>UniRef50_Q9F6L2 Cluster: Cytosine-specific methyltransferase; n=1;
Streptomyces griseus|Rep: Cytosine-specific
methyltransferase - Streptomyces griseus
Length = 429
Score = 44.0 bits (99), Expect = 0.004
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 13/129 (10%)
Frame = +3
Query: 102 RILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIE 281
+ + L+SG GG C V AA++++ A Y++NFPE LF ++
Sbjct: 25 KAVSLFSGCGGF-CE-GVRLAGFSVEAAVELDRFAAVTYRHNFPEVPLFEGDVHDFLNDS 82
Query: 282 IEKYK-------------IDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNT 422
E ++ ID + PPCQ +++ G + +DPR + ++ +L L
Sbjct: 83 SETWRGEAERFSDVKAGNIDLLFGGPPCQGYSQIGTRI-LDDPRNQLYAEYVRVLKTLRP 141
Query: 423 LQYILMENV 449
+ LMENV
Sbjct: 142 -RVFLMENV 149
>UniRef50_Q4HNI4 Cluster: C-5 cytosine-specific DNA methylase; n=1;
Campylobacter upsaliensis RM3195|Rep: C-5
cytosine-specific DNA methylase - Campylobacter
upsaliensis RM3195
Length = 315
Score = 44.0 bits (99), Expect = 0.004
Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 5/166 (3%)
Frame = +3
Query: 102 RILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIE 281
+I L++GIGG+ + ++ K A+++++ A YK N ++ L ++
Sbjct: 2 KIGSLFAGIGGIELGFKKAGFK--TAWAVELDSKACITYKANHKHKIINN----DLAKVD 55
Query: 282 IEKY-KIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKG- 455
++ KID + PCQ F+ G D R N F + L+ I +ENVK
Sbjct: 56 LKSLSKIDILTAGFPCQAFSVAGYRKGFKDERGNVFFEILRYLEHFKP-SIIFLENVKNL 114
Query: 456 FECSTVR--NLFVEKLTYCGFVYQEFMLSPVSVG-VPNSRLRYYCI 584
F+ R + ++L G+ + +L+ G +P +R R Y I
Sbjct: 115 FKHDKGRTFEIIKKELQKLGYFLKYEILNTSEYGNIPQNRERIYII 160
>UniRef50_Q1EXN9 Cluster: Cytosine-specific methyltransferase; n=4;
Bacteria|Rep: Cytosine-specific methyltransferase -
Clostridium oremlandii OhILAs
Length = 423
Score = 44.0 bits (99), Expect = 0.004
Identities = 35/113 (30%), Positives = 49/113 (43%), Gaps = 7/113 (6%)
Frame = +3
Query: 282 IEKYKIDTVLMSPPCQPFTRNGKNLDEN----DPRTNSFLYFIDILDKLNTLQYILMENV 449
+E ID ++ PPCQ ++ G+ DEN DPR + +I L+K +I ENV
Sbjct: 116 MEHEGIDLIIGGPPCQAYSLVGRARDENNMEDDPRNYLYKLYIRFLNKYKPKAFI-FENV 174
Query: 450 KGFECSTVRNLFVEKLTY---CGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNN 599
G + NLF Y G+ Q + GV SR R I R +
Sbjct: 175 PGILTAFKGNLFRNLQAYMRRVGYNIQARKMDAKDFGVLQSRKRVIIIGWRKD 227
>UniRef50_A1T430 Cluster: DNA-cytosine methyltransferase precursor;
n=1; Mycobacterium vanbaalenii PYR-1|Rep: DNA-cytosine
methyltransferase precursor - Mycobacterium vanbaalenii
(strain DSM 7251 / PYR-1)
Length = 386
Score = 44.0 bits (99), Expect = 0.004
Identities = 37/128 (28%), Positives = 58/128 (45%)
Frame = +3
Query: 72 SSTMEEKMEHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFT 251
S T + + + L++G GGM E++ KVV AID + A Y+ N + ++
Sbjct: 6 SMTRGRQQRYAAVSLFAGCGGMDLG-AEASRAAKVVWAIDSDPWAVQTYQRNIGKHIV-- 62
Query: 252 KNIQSLTPIEIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQY 431
+ + TP+ + D +L PPCQ ++ + R N F LD L +
Sbjct: 63 EGDVTTTPVP--EVPCDVLLAGPPCQDYSTLWNHDGLKTARGNLFREVARFLDALRPAGF 120
Query: 432 ILMENVKG 455
IL ENV G
Sbjct: 121 IL-ENVPG 127
>UniRef50_Q98567 Cluster: Cytosine-specific methyltransferase; n=4;
Chlorovirus|Rep: Cytosine-specific methyltransferase -
Paramecium bursaria Chlorella virus 1 (PBCV-1)
Length = 344
Score = 43.6 bits (98), Expect = 0.005
Identities = 40/171 (23%), Positives = 73/171 (42%), Gaps = 2/171 (1%)
Frame = +3
Query: 102 RILELYSGIGGMHCAWNESTIKGKV--VAAIDINTVANDVYKYNFPETLLFTKNIQSLTP 275
R L+L+SGIGG+ ++G V +A ++ N A + +P+ +F ++ +
Sbjct: 3 RALDLFSGIGGITYG-----LRGIVTPIAYVEKNEDARGFLQRKYPDVPVF-DDVCTFDA 56
Query: 276 IEIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKG 455
IE K K+D + PC F+ GK + F I I + Y+ +EN
Sbjct: 57 IE-WKGKVDIITAGWPCTGFSTAGKGTGFEHEASGLFSEVIRITKECEP-SYLFLENSHV 114
Query: 456 FECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNNTWN 608
++ V+ G+ + VG P+ R R++C+ + + N
Sbjct: 115 LSKRKNISVVVDAFDNLGYDCKWLTCRATCVGAPHQRHRWFCLVIKRSIVN 165
>UniRef50_Q71I31 Cluster: Cytosine-specific methyltransferase; n=1;
Lactobacillus delbrueckii subsp. lactis|Rep:
Cytosine-specific methyltransferase - Lactobacillus
delbrueckii subsp. lactis
Length = 138
Score = 43.6 bits (98), Expect = 0.005
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Frame = +3
Query: 294 KIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKGF---EC 464
++D V PPCQ F+ + +DPR + Y+++ + L ++ MENVKG C
Sbjct: 28 EVDMVXGGPPCQGFSEANRQRLIDDPRNKLYKYYVESVTALQPKVFV-MENVKGMLKVAC 86
Query: 465 STVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNN 599
+ + F ++ Y+ +L+ + GVP +R R I R +
Sbjct: 87 QVLED-FNNSASHYDIYYK--VLNARNFGVPQNRERLIYIGIRKD 128
>UniRef50_A7BCH4 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 355
Score = 43.6 bits (98), Expect = 0.005
Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 16/177 (9%)
Frame = +3
Query: 102 RILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSL---- 269
R++ LYSG GG+ + ++ V + DIN A D Y+ KN L
Sbjct: 2 RLISLYSGAGGLDLGFAKAGFIP--VFSADINRDAVDTYRTISKAVQGEWKNAAVLFENC 59
Query: 270 ---------TPIEIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNT 422
++ + V+ PPCQ F+ GK +D D R +F++++ ++
Sbjct: 60 DVRCGDVLAESNDLSAGDAEIVIGGPPCQGFSVGGK-MDPEDLRIREVFHFLEVVKRVRP 118
Query: 423 LQYILMENVKGFECSTVRNLFVEKL--TYCGFVYQEF-MLSPVSVGVPNSRLRYYCI 584
L ++ MENV+ + N EK+ G + +L+ GVP R R + +
Sbjct: 119 LVFV-MENVEALATNVKWNHIREKMEQEVSGLYHTNIHVLNAADYGVPQLRRRMFFV 174
>UniRef50_A1WDJ0 Cluster: C-5 cytosine-specific DNA methylase; n=2;
Proteobacteria|Rep: C-5 cytosine-specific DNA methylase
- Acidovorax sp. (strain JS42)
Length = 304
Score = 43.6 bits (98), Expect = 0.005
Identities = 39/166 (23%), Positives = 72/166 (43%), Gaps = 1/166 (0%)
Frame = +3
Query: 102 RILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIE 281
R ++L++G GG +VV A + +A ++ N P+T +++Q
Sbjct: 2 RCIDLFAGAGGF--TEGARLAGARVVWAANHWPLAVQYHQTNHPDTWHECQDLQQADWRA 59
Query: 282 IEKYKIDTVLMSPPCQPFTR-NGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKGF 458
+ + D VL SP CQ +R G+ +D S + + + + IL+ENV F
Sbjct: 60 VPAH--DVVLASPACQGHSRARGRERPHHDA-LRSTAWAVVACAEYHRSPVILVENVPDF 116
Query: 459 ECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRN 596
E + + + L G+ ++ GVP +R R + + R+
Sbjct: 117 EKWVLYPAWRDALRRLGYAVSPHLVDAADHGVPQNRQRLFLVCTRS 162
>UniRef50_A0UIW9 Cluster: Cytosine-specific methyltransferase; n=1;
Burkholderia multivorans ATCC 17616|Rep:
Cytosine-specific methyltransferase - Burkholderia
multivorans ATCC 17616
Length = 380
Score = 43.6 bits (98), Expect = 0.005
Identities = 43/170 (25%), Positives = 71/170 (41%), Gaps = 4/170 (2%)
Frame = +3
Query: 93 MEHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLT 272
M R + SGI CAW+ + V+ I+ A V +++P N+ +T
Sbjct: 1 MTFRFGSVCSGIEAASCAWHPLGWRTAFVSEIEPFPCA--VLAHHYPSV----PNLGDMT 54
Query: 273 PI-EIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENV 449
E ID ++ PCQ F+ G DPR N L ++ I + ++++ ENV
Sbjct: 55 NFKEWPDAAIDLLVGGTPCQSFSVAGLRKGLADPRGNLMLTYLAIAQRY-APRWLVWENV 113
Query: 450 KGFECSTVR---NLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAK 590
G S F+ L G+ + +L G+P R R + +A+
Sbjct: 114 PGVLSSNGGRDFGTFLGGLAELGYGFAYRVLDAQYFGIPQQRRRVFVVAR 163
>UniRef50_P17044 Cluster: Modification methylase BsuFI; n=4;
Bacteria|Rep: Modification methylase BsuFI - Bacillus
subtilis
Length = 409
Score = 43.6 bits (98), Expect = 0.005
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 5/160 (3%)
Frame = +3
Query: 108 LELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPI-EI 284
++L++GIGG+ + + K V + + + A Y+ N+ E K +T I E
Sbjct: 104 IDLFAGIGGIRLGFEDKYTK--CVFSSEWDKYAAQTYEANYGE-----KPHGDITKINEN 156
Query: 285 EKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKGFEC 464
+ D +L PCQPF+ GK R N + IL K + L+ENVKG
Sbjct: 157 DIPDQDVLLAGFPCQPFSNIGKREGFAHERRNIIFDVLRILKKKQPKMF-LLENVKGLLT 215
Query: 465 STVRNLF---VEKLTYCGF-VYQEFMLSPVSVGVPNSRLR 572
+ N F ++ L G+ V+ E M + G+P R R
Sbjct: 216 NDNGNTFRVILDNLKSLGYSVFYEVM-DAQNFGLPQRRER 254
>UniRef50_Q72ZR3 Cluster: DNA-cytosine methyltransferase family
protein; n=2; Firmicutes|Rep: DNA-cytosine
methyltransferase family protein - Bacillus cereus
(strain ATCC 10987)
Length = 362
Score = 43.2 bits (97), Expect = 0.007
Identities = 26/130 (20%), Positives = 65/130 (50%), Gaps = 6/130 (4%)
Frame = +3
Query: 108 LELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTP---- 275
+ ++G GG+ +++ +V ++++ V + + N P + +I + TP
Sbjct: 4 ISFFAGAGGLDMGIHKAGFDVRV--SVELEPVYCETLRTNHPNWNVVEGDIMTYTPEQVL 61
Query: 276 --IEIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENV 449
++++ ++D ++ PCQ F+ GK +DPR + L F ++ + + ++ENV
Sbjct: 62 EQADLQEGEVDLMIGGSPCQSFSTAGKRQAFSDPRGQAMLKFAKLVRDIRPKAF-MIENV 120
Query: 450 KGFECSTVRN 479
+G + +++
Sbjct: 121 RGLLSAALKH 130
>UniRef50_Q67PU8 Cluster: Site-specific DNA-methyltransferase; n=3;
Bacteria|Rep: Site-specific DNA-methyltransferase -
Symbiobacterium thermophilum
Length = 486
Score = 43.2 bits (97), Expect = 0.007
Identities = 47/189 (24%), Positives = 88/189 (46%), Gaps = 27/189 (14%)
Frame = +3
Query: 102 RILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFT-----KNIQS 266
R+L+L++G GG+ + + + ++AA++++ A + NF F ++I
Sbjct: 14 RVLDLFAGCGGLSLGFQRAGFE--ILAAVEMDPHAARSHAINFHPGDRFDLHAKPRDISQ 71
Query: 267 LTPIEI--EKYK-------IDTVLMSPPCQPFTRNGK-NLDE---------NDPRTNSFL 389
P ++ E Y +D ++ PPCQ + R G+ L E DPR + FL
Sbjct: 72 EQPDQVLGELYPGERAEDLVDIIIGGPPCQAYARVGRAKLREIWRHPEGYKLDPRGDLFL 131
Query: 390 YFIDILDKLNTLQYILMENVK---GFECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPN 560
+++ +D+L + ++MENV + + + L +V + +L+ V GVP
Sbjct: 132 HYLYYVDRLKPVA-LVMENVPDALNYGGHNIAQEVADWLEDRNYVCRYTLLNAVHYGVPQ 190
Query: 561 SRLRYYCIA 587
R R + IA
Sbjct: 191 MRERMFLIA 199
>UniRef50_Q6QPZ2 Cluster: Cytosine-specific methyltransferase; n=2;
Lactococcus lactis|Rep: Cytosine-specific
methyltransferase - Lactococcus lactis
Length = 465
Score = 43.2 bits (97), Expect = 0.007
Identities = 46/202 (22%), Positives = 89/202 (44%), Gaps = 16/202 (7%)
Frame = +3
Query: 84 EEKMEHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFT---- 251
+E + L L++ IG + I VV A ++ +Y+ +P++ +
Sbjct: 86 KENNKINALSLFANIGVAEAYLEDIGID--VVVANELEERRAILYQKIYPKSHMICGDIT 143
Query: 252 -KNIQSLTPIEIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQ 428
K+I+ E ++ K+D V+ +PPCQ + G END R IDI++++ +
Sbjct: 144 DKSIEDKIIKESKEKKVDLVMATPPCQGMSTAGYQ-KENDDRNRLICQVIDIVNRVEP-K 201
Query: 429 YILMENVKGFECSTV----RNLFVEKL--TYCGFVYQ--EFMLSPVSVGVPNSRLRYYCI 584
Y+ +ENV F + + + + L G Y+ ++ ++ VP +R R +
Sbjct: 202 YVFIENVALFYNTAIIVNDEKILIPDLINKELGNQYKINKYTINTKDYSVPQTRERAIML 261
Query: 585 AKRNN---TWNFKRKDELITCL 641
R + W +KDE + +
Sbjct: 262 LTRKDIKTIWTLPQKDEKVVTM 283
>UniRef50_A7LUQ6 Cluster: Putative uncharacterized protein; n=1;
Bacteroides ovatus ATCC 8483|Rep: Putative
uncharacterized protein - Bacteroides ovatus ATCC 8483
Length = 417
Score = 43.2 bits (97), Expect = 0.007
Identities = 48/186 (25%), Positives = 84/186 (45%), Gaps = 26/186 (13%)
Frame = +3
Query: 105 ILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETL----------LFTK 254
+++L+SG GG+ +++ +G + A++ T A + KYN + L K
Sbjct: 9 VIDLFSGCGGLSLGLHKAGWRG--LFAVEKCTDAFETLKYNLIDNKTDPHFQWPKWLPIK 66
Query: 255 NIQSLTPIEIEKY-------KIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDK 413
N + T +E + KID V PPCQ F+ G+ E+D R + +I ++
Sbjct: 67 NWEIDTLLENYSFQLSNLRNKIDLVAGGPPCQGFSMAGRR-KEDDVRNHLVHSYIKFIEL 125
Query: 414 LNTLQYILMENVKGFECSTVRN---------LFVEKLTYCGFVYQEFMLSPVSVGVPNSR 566
++ + + ENVKGF +N L VE+L G+ +++ GVP R
Sbjct: 126 VHP-KMLFFENVKGFTQEFKKNKEKGIAYSHLVVEELEKLGYRTASQLVNFGDYGVPQKR 184
Query: 567 LRYYCI 584
R+ +
Sbjct: 185 TRFILV 190
>UniRef50_A4X0Z6 Cluster: C-5 cytosine-specific DNA methylase; n=1;
Salinispora tropica CNB-440|Rep: C-5 cytosine-specific
DNA methylase - Salinispora tropica CNB-440
Length = 236
Score = 43.2 bits (97), Expect = 0.007
Identities = 37/164 (22%), Positives = 72/164 (43%), Gaps = 3/164 (1%)
Frame = +3
Query: 105 ILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTK-NIQSLTPIE 281
+LEL++GIGG+ + + ++V ++IN V ++PE +
Sbjct: 8 VLELFAGIGGLSLGLQRAGL--RIVGHVEINPFCRAVLHKHWPEVPCHDDVRTAAAWWRS 65
Query: 282 IEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTL--QYILMENVKG 455
++ ++D V PCQP + GK +D R + D+ ++ + +Y++ ENV G
Sbjct: 66 TDRPRVDVVAGGYPCQPESTAGKRRGTDDDR----WLWPDMARVIHAIRPRYVVGENVMG 121
Query: 456 FECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIA 587
+R + L G+ ++ +G P+ R R +A
Sbjct: 122 HRTRGLR-FVLRDLQRLGYTASAGIIRACEMGAPHPRPRLLVLA 164
>UniRef50_A3U4H1 Cluster: Cytosine-specific methyltransferase; n=2;
Bacteroidetes|Rep: Cytosine-specific methyltransferase -
Croceibacter atlanticus HTCC2559
Length = 735
Score = 43.2 bits (97), Expect = 0.007
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Frame = +3
Query: 279 EIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKGF 458
+I KID V PPCQ F+ GK + D + + F ++++++ L +Y +MENVKG
Sbjct: 192 KINGRKIDVVCGGPPCQSFSLAGKR-KKFDKKDDLFSHYLEVIKVLQP-KYFVMENVKGI 249
Query: 459 ---ECSTVRNLFVEKL 497
E ++ L ++++
Sbjct: 250 LTKEKGKIKELIIKEI 265
>UniRef50_A7IVW3 Cluster: Putative uncharacterized protein B088L;
n=2; Chlorovirus|Rep: Putative uncharacterized protein
B088L - Paramecium bursaria Chlorella virus NY2A
(PBCV-NY2A)
Length = 343
Score = 42.7 bits (96), Expect = 0.009
Identities = 42/167 (25%), Positives = 68/167 (40%), Gaps = 3/167 (1%)
Frame = +3
Query: 102 RILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIE 281
R L+L+SGIGG A + K VA ++ D FP+ +F + +
Sbjct: 6 RSLDLFSGIGGNSYALRDIL---KPVAYVEREQHLRDFLGRKFPDVPIF----DDVVTFD 58
Query: 282 IEKYK-IDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKGF 458
K ID + PC F+ GK + F + I +L +++ +EN
Sbjct: 59 TRSVKDIDIITAGFPCTGFSTAGKGDGFEHEASGLFTEVVRIAKELEP-RFVFLEN--SH 115
Query: 459 ECSTVRNLFV--EKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKR 593
+ V NL V + G+ + +VG P R R++C+A R
Sbjct: 116 TVARVENLHVIIDAFDVLGYDCRWTTTHATAVGAPQQRHRWFCLAVR 162
>UniRef50_A1K3I3 Cluster: Cytosine-specific methyltransferase; n=1;
Azoarcus sp. BH72|Rep: Cytosine-specific
methyltransferase - Azoarcus sp. (strain BH72)
Length = 434
Score = 42.7 bits (96), Expect = 0.009
Identities = 20/73 (27%), Positives = 39/73 (53%)
Frame = +3
Query: 261 QSLTPIEIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILM 440
Q L + ++ ++D ++ PPCQ F+ GK DPR ++ ++ + ++ LM
Sbjct: 56 QVLDSVNLKPGEVDLLVGGPPCQSFSTAGKRGTVQDPRGTLLWQYLRFVEYIQP-KFFLM 114
Query: 441 ENVKGFECSTVRN 479
ENV+G + +R+
Sbjct: 115 ENVRGLVSAALRH 127
>UniRef50_Q4AM33 Cluster: C-5 cytosine-specific DNA methylase; n=1;
Chlorobium phaeobacteroides BS1|Rep: C-5
cytosine-specific DNA methylase - Chlorobium
phaeobacteroides BS1
Length = 404
Score = 42.3 bits (95), Expect = 0.013
Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 10/117 (8%)
Frame = +3
Query: 291 YKIDTVLMSPPCQPFTRNGKNLDEN----DPRTNSFLYFIDILDKLNTLQYILMENVKGF 458
+ +D ++ PPCQ ++ G++ D+N D R + Y+ + L + Y L ENV G
Sbjct: 93 HSLDLIVGGPPCQAYSVIGRSRDKNRMKGDKRNYLYTYYAEFLKRYKP-SYFLFENVTGL 151
Query: 459 ------ECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNNTWNF 611
+ S N + CG+ + LS GV R R + K+ F
Sbjct: 152 LSARDDDGSLYFNTMRDLFFDCGYETEYMALSASDYGVLQRRKRVILVGKKGRQTGF 208
>UniRef50_A0GNZ6 Cluster: Cytosine-specific methyltransferase; n=3;
root|Rep: Cytosine-specific methyltransferase -
Burkholderia phytofirmans PsJN
Length = 317
Score = 42.3 bits (95), Expect = 0.013
Identities = 37/131 (28%), Positives = 64/131 (48%)
Frame = +3
Query: 108 LELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIEIE 287
+ L++G GG ++ V+ A DI A DVY +N PET + S+ I+
Sbjct: 5 VSLFTGCGGSDAGL--VSLGFNVLMANDILPYARDVYLHNHPET---DYRLGSVADIK-S 58
Query: 288 KYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKGFECS 467
K + ++ PCQ F++ G + N +L F+ L ++ +I +ENV G S
Sbjct: 59 FPKAELLVGCYPCQGFSQGGAR-EANRNINYLYLEFLRALQQIQPKAFI-VENVSGMIRS 116
Query: 468 TVRNLFVEKLT 500
T R+L ++++
Sbjct: 117 TYRHLLDDQIS 127
>UniRef50_A7A2L6 Cluster: Putative uncharacterized protein; n=1;
Bifidobacterium adolescentis L2-32|Rep: Putative
uncharacterized protein - Bifidobacterium adolescentis
L2-32
Length = 213
Score = 41.9 bits (94), Expect = 0.017
Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 2/120 (1%)
Frame = +3
Query: 102 RILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIE 281
+ + L+SGI AW T+ + VA +I V K+++P ++ +T +
Sbjct: 2 KYISLFSGIEAATVAWQ--TLGWEPVAYAEIEPFPKAVLKHHYPNV----PDLGDMTKVN 55
Query: 282 IEKYK--IDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKG 455
++Y D V+ PCQ F+ G +DPR L ++ +++ ++I+ ENV G
Sbjct: 56 WKEYHHAADVVVGGSPCQAFSIAGLRKALDDPRGQLMLEYLRACAEIDP-EWIVWENVPG 114
>UniRef50_A7IXM2 Cluster: Putative uncharacterized protein B697R;
n=2; Chlorovirus|Rep: Putative uncharacterized protein
B697R - Paramecium bursaria Chlorella virus NY2A
(PBCV-NY2A)
Length = 369
Score = 41.5 bits (93), Expect = 0.022
Identities = 36/167 (21%), Positives = 67/167 (40%), Gaps = 1/167 (0%)
Frame = +3
Query: 102 RILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIE 281
R L+L+SGIGG+ E + +A ++ N A K PE +F + +
Sbjct: 4 RALDLFSGIGGITHGLREIV---EPIAFVEKNDEARSFLKKKHPEIPVF----DDVCSFD 56
Query: 282 IEKY-KIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKGF 458
K+ +D +L PC F+ G + + F + I ++ +Y+ +EN
Sbjct: 57 ATKWTHVDIILAGWPCTGFSNAGTKTGFSHEASGLFTEVVRITEECRP-KYVFLENSHTL 115
Query: 459 ECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNN 599
++ V G+ + VG + R R++C+ R +
Sbjct: 116 SLFENISVIVNAFDELGYDCRWITCRATCVGALHQRHRWFCLVVRRD 162
>UniRef50_Q5I6E7 Cluster: M.HinP1I methyltransferase; n=9;
Proteobacteria|Rep: M.HinP1I methyltransferase -
Haemophilus influenzae
Length = 322
Score = 41.5 bits (93), Expect = 0.022
Identities = 39/170 (22%), Positives = 73/170 (42%), Gaps = 4/170 (2%)
Frame = +3
Query: 102 RILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIE 281
+ ++ +GIGG + ++ + +D+N +N L ++ L P
Sbjct: 5 KFIDFCAGIGGGRLGLELNGMECIAHSEVDLNPAKTYEIFFNDSRNL---GDLTQLAPKS 61
Query: 282 IEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKGF- 458
+ + D ++ PCQ F+ GK D R Y +IL K+ + + ++ENVKG
Sbjct: 62 LPDF--DLMIAGFPCQTFSIIGKRDGFLDDRGQIIYYLSNIL-KVKKVPFFILENVKGLV 118
Query: 459 ---ECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNN 599
+ T++++ +E L C + +L G P R R Y + R +
Sbjct: 119 NHNQGETLKSI-LEILEGCNYDVYYKVLDSQFYGTPQMRERIYFVGIRKD 167
>UniRef50_Q1MRD1 Cluster: Modification methylase BepI; n=1; Lawsonia
intracellularis PHE/MN1-00|Rep: Modification methylase
BepI - Lawsonia intracellularis (strain PHE/MN1-00)
Length = 294
Score = 41.5 bits (93), Expect = 0.022
Identities = 42/154 (27%), Positives = 64/154 (41%), Gaps = 2/154 (1%)
Frame = +3
Query: 204 ANDVYKYNFPETLLFTKNIQSLTPIEIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNS 383
+N V+ NF T K+I L + K + V+ PCQ F+ GK R +
Sbjct: 4 SNVVWSSNFTGTFQL-KSIADLLNENFQFPKANLVIGGFPCQDFSVAGKREGLKTQRGSL 62
Query: 384 FLYFIDILDKLNTLQYILMENVKG-FECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPN 560
+ +++ +++ +I ENV G F VR G+ F+L GVP
Sbjct: 63 YHCMTEVIQQVSPEAFI-AENVYGLFYIPGVREKITSDFEQIGYTVFSFLLFSNEYGVPQ 121
Query: 561 SRLRYYCIAKRNNTWNFKRKDELITCL-PKTFAK 659
R R + I + T KRK + + PKT K
Sbjct: 122 IRRRVFFIGLK--TEALKRKVSINEIIPPKTHQK 153
>UniRef50_Q92LC3 Cluster: Cytosine-specific methyltransferase; n=1;
Sinorhizobium meliloti|Rep: Cytosine-specific
methyltransferase - Rhizobium meliloti (Sinorhizobium
meliloti)
Length = 440
Score = 41.1 bits (92), Expect = 0.029
Identities = 22/65 (33%), Positives = 37/65 (56%)
Frame = +3
Query: 297 IDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKGFECSTVR 476
ID + PPCQ F+ G+ +E+DPR F ++++++ L Q +++ENV G + R
Sbjct: 86 IDVLAGGPPCQGFSFAGRR-NEDDPRNLLFKKYVEMVEALQP-QALVIENVPGMRVAHAR 143
Query: 477 NLFVE 491
VE
Sbjct: 144 RNVVE 148
>UniRef50_Q0RSU4 Cluster: Putative DNA Modification methylase; n=1;
Frankia alni ACN14a|Rep: Putative DNA Modification
methylase - Frankia alni (strain ACN14a)
Length = 401
Score = 41.1 bits (92), Expect = 0.029
Identities = 42/165 (25%), Positives = 73/165 (44%), Gaps = 2/165 (1%)
Frame = +3
Query: 105 ILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIEI 284
I++L+ G GGM + ++ + AID + + D ++ NFP L +I+ ++
Sbjct: 57 IIDLFCGAGGMSLGFVQAGFSP--ILAIDHDQPSIDTHRANFPGDSLCV-DIRDVSDFPA 113
Query: 285 EKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQ--YILMENVKGF 458
D V+ PPCQ F+R GK + R ++L+ +D + + Q ++ENV F
Sbjct: 114 A----DVVIGGPPCQGFSRLGKKAKKE--RLENYLW-MDFMRCVAASQPAVFVIENVPEF 166
Query: 459 ECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKR 593
+ G+ +L+ + GVP R R I R
Sbjct: 167 LKDPAFLGVSREAKKLGYKLVFAVLNAANYGVPQRRQRTIVIGSR 211
>UniRef50_A6WZ22 Cluster: Cytosine-specific methyltransferase; n=1;
Ochrobactrum anthropi ATCC 49188|Rep: Cytosine-specific
methyltransferase - Ochrobactrum anthropi (strain ATCC
49188 / DSM 6882 / NCTC 12168)
Length = 414
Score = 41.1 bits (92), Expect = 0.029
Identities = 43/187 (22%), Positives = 82/187 (43%), Gaps = 20/187 (10%)
Frame = +3
Query: 99 HRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNF-PETLLFTKNIQSLTP 275
+ ++ ++G GG + + + V+ A + A + Y N P T++ ++I+ +T
Sbjct: 82 YNVISTFAGCGGSSTGYRMAGFR--VLFASEFIEAARETYLANARPGTIVDGRDIRQVTA 139
Query: 276 IEI------EKYKIDTVLMSPPCQPFTRNGKN---------LDENDPRTNS-FLYFIDIL 407
EI + ++D SPPC F+ GK +++ R + F + +L
Sbjct: 140 DEILAATGLKPGELDVFDGSPPCASFSTAGKREKAWGQVKKYSDSEQRVDDLFFEYARLL 199
Query: 408 DKLNTLQYILMENVKGFECSTVRNLFVE---KLTYCGFVYQEFMLSPVSVGVPNSRLRYY 578
+L ++ ENV G T + F+E L CG+ + +L +GVP +R R
Sbjct: 200 RQLKPKVFVA-ENVSGLIKGTAKGYFLEILAALKACGYRVEARLLDAQWLGVPQARQRLI 258
Query: 579 CIAKRNN 599
+ R +
Sbjct: 259 FMGVRED 265
>UniRef50_Q2H497 Cluster: Cytosine-specific methyltransferase; n=1;
Chaetomium globosum|Rep: Cytosine-specific
methyltransferase - Chaetomium globosum (Soil fungus)
Length = 748
Score = 41.1 bits (92), Expect = 0.029
Identities = 35/161 (21%), Positives = 70/161 (43%), Gaps = 3/161 (1%)
Frame = +3
Query: 111 ELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIEIEK 290
+++SG GG + ++ ++ A+D A + K NF E+ ++ ++ S
Sbjct: 341 DVFSGAGGASRGIERAGVQ--LLFAVDHWAPAVESLKSNFRESRIYDMDVASFITSSDTH 398
Query: 291 YKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKGFECST 470
+++D + +SPPCQ ++ +ND + L+ L + + + +E G
Sbjct: 399 WRVDILHLSPPCQFWSPAHTVAGKNDAHNIAVLFSATHLVENHKPRVFTVEQTFGILSPK 458
Query: 471 VR---NLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCI 584
+ N F+ T G+ + ++ S GVP R R I
Sbjct: 459 FKEFFNTFLHGFTKLGYSVRWKIVPLASYGVPQLRKRLIMI 499
>UniRef50_P25282 Cluster: Modification methylase HgaIA; n=3;
Proteobacteria|Rep: Modification methylase HgaIA -
Haemophilus gallinarum
Length = 357
Score = 41.1 bits (92), Expect = 0.029
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 14/128 (10%)
Frame = +3
Query: 294 KIDTVLMSPPCQPFTRNGKNLD----ENDPRTNSFLYFIDILDKLNTLQYILMENVKGF- 458
++D ++ SPPCQ + GKN D ND R +Y I ++ KL YIL+ENV
Sbjct: 73 QVDFLIASPPCQGMSVAGKNRDVSNMANDNRNYLIMYVIAMIKKLKP-AYILIENVPFLL 131
Query: 459 --------ECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYC-IAKRNNTWNF 611
+ + ++N+ ++ ++ + +L G P R R + K+ WN
Sbjct: 132 KLELYIDNKLTPIKNILEDEFGSEYHIHFD-ILDAADYGTPQRRKRAIIRLNKKGTIWNL 190
Query: 612 KRKDELIT 635
K +++
Sbjct: 191 PLKQNIVS 198
>UniRef50_P25283 Cluster: Modification methylase HgaIB; n=1;
Avibacterium paragallinarum|Rep: Modification methylase
HgaIB - Haemophilus gallinarum
Length = 358
Score = 40.7 bits (91), Expect = 0.038
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Frame = +3
Query: 210 DVYKYNFPETLLFTKNI--QSLTP---IEIEKYKIDTVLMSPPCQPFTRNGKNLDEND-- 368
D Y++ +PET +F +I + L + ++ + +L +PPCQ + GKN ++
Sbjct: 38 DTYQFFYPETKMFQGDISDEKLKREILLSAQQNNVKFLLATPPCQGLSSVGKNKHQDHFI 97
Query: 369 PRTNSFLYF--IDILDKLNTLQYILMENVKGF 458
+FL F + +D LN L +IL+ENV F
Sbjct: 98 KDNRNFLIFEVFEFIDVLN-LDFILIENVPRF 128
>UniRef50_Q9RLM4 Cluster: Probable modification methylase NmeDIP;
n=17; Bacteria|Rep: Probable modification methylase
NmeDIP - Neisseria meningitidis serogroup C
Length = 420
Score = 40.7 bits (91), Expect = 0.038
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Frame = +3
Query: 318 PPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKG-FECSTVRNLF--- 485
PPC F+ GKN ++ ++D++ K N + + ENVKG + + R F
Sbjct: 146 PPCPDFSIAGKNKGKDGENGKLSQSYVDLICK-NQPDFFVFENVKGLYRTAKHREFFNAL 204
Query: 486 VEKLTYCGFVYQEFMLSPVSVGVPNSRLR 572
+L+ G+V E +++ + GVP R R
Sbjct: 205 KRQLSDFGYVCTEKLINAIEYGVPQDRER 233
>UniRef50_A5TVS1 Cluster: Cytosine-specific methyltransferase; n=1;
Fusobacterium nucleatum subsp. polymorphum ATCC
10953|Rep: Cytosine-specific methyltransferase -
Fusobacterium nucleatum subsp. polymorphum ATCC 10953
Length = 492
Score = 40.3 bits (90), Expect = 0.050
Identities = 33/146 (22%), Positives = 62/146 (42%), Gaps = 3/146 (2%)
Frame = +3
Query: 294 KIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKGF---EC 464
K+D + PCQ F+ GK D R F + ++ ++ +I ENVK +
Sbjct: 184 KVDLFVGGSPCQSFSLVGKQRGLQDTRGTLFYEYARLVKEIRPKVFI-YENVKAILSNDN 242
Query: 465 STVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNNTWNFKRKDELITCLP 644
+ + T + + +L+ G+P +R R + + R + K+K E P
Sbjct: 243 GKTWEVISKVFTDLDYDWNFSILNSKDYGIPQNRERVFVVGFRKDL-KLKKKFE----FP 297
Query: 645 KTFAKPHCLKDIIENNVPDDYLVPDK 722
+ F ++D + +NV Y + +K
Sbjct: 298 RPFLLEKTMQDFLLDNVAGKYYLQEK 323
>UniRef50_A3TMV4 Cluster: Cytosine-specific methyltransferase; n=1;
Janibacter sp. HTCC2649|Rep: Cytosine-specific
methyltransferase - Janibacter sp. HTCC2649
Length = 499
Score = 40.3 bits (90), Expect = 0.050
Identities = 41/177 (23%), Positives = 76/177 (42%), Gaps = 18/177 (10%)
Frame = +3
Query: 108 LELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETL------LFTKNIQSL 269
++L++GIGG H + + G+ V +I+ A Y N+ + L + +I
Sbjct: 38 VDLFAGIGGFHAMLDHAG--GRCVYVSEIDREARQTYVRNWVDPLPTAQQPIVNTDITIA 95
Query: 270 TPIE--IEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILME 443
TP + ++ D + PCQPF+++G ++ R F IL++ +L+E
Sbjct: 96 TPDDAPVDVPNHDVLAAGFPCQPFSKSGYQRGMDEARGTLFWNIARILEERQP-AVVLLE 154
Query: 444 NVKGFECSTVRN---LFVEKLTYCGF-------VYQEFMLSPVSVGVPNSRLRYYCI 584
NV+ R+ + ++ L G+ V+ L P G P R R + +
Sbjct: 155 NVRNLAGPRHRHEWEVIIQTLRELGYRVSSTPSVFSPHFLPPSLGGTPQVRDRVFIL 211
>UniRef50_A3WIX9 Cluster: Cytosine-specific methyltransferase; n=1;
Idiomarina baltica OS145|Rep: Cytosine-specific
methyltransferase - Idiomarina baltica OS145
Length = 345
Score = 39.5 bits (88), Expect = 0.088
Identities = 45/176 (25%), Positives = 76/176 (43%), Gaps = 10/176 (5%)
Frame = +3
Query: 96 EHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTP 275
++ LE+ +G GG + + + A I+I + A + N E L + I
Sbjct: 10 KYTCLEMCAGAGGQALGLHMAGFRHS--ALIEIESAACKTLRLNNQEHNLGWQEIIEGDL 67
Query: 276 IEIEK-----YK--IDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYI 434
IE + YK ID V PC PF++ GK L +D R + F + +++ + + +
Sbjct: 68 IEFSQSNAKSYKDQIDLVAGGVPCPPFSKAGKQLGSSDER-DLFPAALKVVENVRP-KAV 125
Query: 435 LMENVKGF---ECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKR 593
++ENV G + R+ KL G+ ++ GVP R R +A R
Sbjct: 126 MLENVPGLLEAKFKDYRSSISLKLQELGYTPFWTLVQSSQFGVPQLRPRTILVALR 181
>UniRef50_A6USQ3 Cluster: DNA-cytosine methyltransferase; n=1;
Methanococcus vannielii SB|Rep: DNA-cytosine
methyltransferase - Methanococcus vannielii SB
Length = 368
Score = 39.5 bits (88), Expect = 0.088
Identities = 40/181 (22%), Positives = 78/181 (43%), Gaps = 15/181 (8%)
Frame = +3
Query: 102 RILELYSGIGGMHCAWNESTIKGK---------VVAAIDINTVANDVYKYNFPETLLFTK 254
+++ L+SG GGM + K ++ + DI+ A Y+ NF + +
Sbjct: 36 KVISLFSGCGGMDLGFKGGFEIFKQHYEHNPYEIIFSNDISDKACRTYESNFCHSSVCA- 94
Query: 255 NIQSLTPIEIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYI 434
+I+ + +I D V+ PCQ F+ GK + R +L ++D + + ++
Sbjct: 95 DIKDIKNEDIPN--ADIVIGGFPCQDFSHAGKRKGLSAERGRLYLEMKRVIDYIKPIAFV 152
Query: 435 LMENVKGFECS------TVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRN 596
ENV G + T ++ ++ G+ +L+ GVP +R+R + RN
Sbjct: 153 A-ENVDGIRTNSKGKDTTALDIILKDFMDSGYQVAYKVLNTADYGVPQTRIRVIIMGIRN 211
Query: 597 N 599
+
Sbjct: 212 D 212
>UniRef50_A2SSP6 Cluster: DNA-cytosine methyltransferase; n=1;
Methanocorpusculum labreanum Z|Rep: DNA-cytosine
methyltransferase - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 352
Score = 39.5 bits (88), Expect = 0.088
Identities = 45/172 (26%), Positives = 77/172 (44%), Gaps = 10/172 (5%)
Frame = +3
Query: 108 LELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYK-------YNFPETLLFTKNIQS 266
++ + G GG+ +++ IK V+ IDI+ Y+ NF + NI
Sbjct: 12 IDFFCGGGGITKGLSDAGIK--VLGGIDISPDLKRTYEENNHNKFVNFDIRTISGSNIYK 69
Query: 267 LTPIEIEKYKIDTVLMS-PPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILME 443
P EIE + + +L PCQPF++ + E+ + + + D L ++L+E
Sbjct: 70 EFP-EIEGDEDNLLLAGCAPCQPFSKQRRANTEHVDKDLLTEFGRIVKDVLPA--HLLIE 126
Query: 444 NVKGF--ECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKR 593
NV G + +V F++ L C + Y +++ GVP R R IA R
Sbjct: 127 NVPGLMKKGHSVLENFLKILDECNYSYDYKVVNANDYGVPQKRKRLVIIASR 178
>UniRef50_A1W7Y6 Cluster: DNA-cytosine methyltransferase; n=13;
Bacteria|Rep: DNA-cytosine methyltransferase -
Acidovorax sp. (strain JS42)
Length = 366
Score = 39.1 bits (87), Expect = 0.12
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 7/170 (4%)
Frame = +3
Query: 108 LELYSGIGGMHCAWNESTIKG-KVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIEI 284
++L+ G GG+ + ++G VVA ID++ Y+ N + ++I +T E+
Sbjct: 26 VDLFCGAGGLTHGF---VLEGLPVVAGIDLDPACRFPYEAN-NQARFVERDISKVTASEL 81
Query: 285 EKYKID---TVLMS-PPCQPFTRNGKN--LDENDPRTNSFLYFIDILDKLNTLQYILMEN 446
+ D T+L PCQPF+ + LD D + LY L K I MEN
Sbjct: 82 KALFGDADLTILAGCAPCQPFSTYAQRYELDGKDGKWG-LLYEFARLAKGAKPDVITMEN 140
Query: 447 VKGFECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRN 596
V V + FV+ L G+ ++ GVP R R +A ++
Sbjct: 141 VPTVAKHEVFHDFVDTLKRLGYNVWFDVVDSSRYGVPQMRRRMVLLASKH 190
>UniRef50_A1DLL2 Cluster: C-5 cytosine methyltransferase DmtA; n=6;
Trichocomaceae|Rep: C-5 cytosine methyltransferase DmtA
- Neosartorya fischeri (strain ATCC 1020 / DSM 3700 /
NRRL 181)(Aspergillus fischerianus (strain ATCC 1020 /
DSM 3700 / NRRL 181))
Length = 632
Score = 39.1 bits (87), Expect = 0.12
Identities = 37/159 (23%), Positives = 65/159 (40%), Gaps = 2/159 (1%)
Frame = +3
Query: 117 YSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIEIEKYK 296
+ G GG+ C +++ + K A D + A Y+ NF + +I + E K
Sbjct: 330 FCGAGGVSCGASKAGLHIKW--AFDKSENAITTYRLNFATAVCEACDIFCFLTNKPEDLK 387
Query: 297 IDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKGF--ECST 470
+D SPPCQ F+ ND ++ ++ + K + + ME G
Sbjct: 388 VDVSHGSPPCQTFSPAHTINSVNDDDNSACIFSCADMIKRSRPRVHTMEETSGLFDRHKE 447
Query: 471 VRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIA 587
+ ++ G+ + +L+ + GVP SR R IA
Sbjct: 448 TFHRVIQDFIEIGYSVRWRILNCMDYGVPQSRRRLIIIA 486
>UniRef50_Q1MHY5 Cluster: Putative modification methylase; n=1;
Rhizobium leguminosarum bv. viciae 3841|Rep: Putative
modification methylase - Rhizobium leguminosarum bv.
viciae (strain 3841)
Length = 666
Score = 38.7 bits (86), Expect = 0.15
Identities = 37/166 (22%), Positives = 71/166 (42%), Gaps = 3/166 (1%)
Frame = +3
Query: 105 ILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIEI 284
++EL +G GG+ ++ + D + VA + N P + +I+ +
Sbjct: 295 VVELCAGAGGISLGLEDAGYHPLALFEFDKHAVAT--LRLNRPLWNVVEGDIRQVDFTAY 352
Query: 285 EKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKG-FE 461
+D ++ PPCQ ++ +GK L ++DPR + L + ++ ++ ENV G
Sbjct: 353 RSVGVDLLVGGPPCQGYSIDGKGLGKDDPR-DLLLECARAVREMLPRAFV-FENVVGLLN 410
Query: 462 CSTVRNL--FVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKR 593
+L F+++L G+ Q + GV R R + R
Sbjct: 411 ARHADHLGNFLKQLKKSGYAVQIVRMEAEDYGVAQERTRMLFVGLR 456
>UniRef50_Q027W7 Cluster: DNA-cytosine methyltransferase; n=1;
Solibacter usitatus Ellin6076|Rep: DNA-cytosine
methyltransferase - Solibacter usitatus (strain
Ellin6076)
Length = 419
Score = 38.7 bits (86), Expect = 0.15
Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 12/128 (9%)
Frame = +3
Query: 237 TLLFTKNIQSLTPIEIEKYKIDTV--------LMSPPCQPFTRNGKNLDENDPRTNSFLY 392
T+ ++I+S P+ I + + T+ + PPC F+ GKN +
Sbjct: 86 TISCRESIRSKGPVAIRREALGTLARGDDFGMIGGPPCPDFSVGGKNRGFAGNKGQLTQL 145
Query: 393 FIDILDKLNTLQYILMENVKGFECSTVRNLFVE----KLTYCGFVYQEFMLSPVSVGVPN 560
FI+ + +L + L+ENVKG + F++ KL G+ +L+ + +GVP
Sbjct: 146 FIERICELEP-SFFLIENVKGLISTRAHREFLDRELWKLEEKGYAVDLRVLNALDLGVPQ 204
Query: 561 SRLRYYCI 584
R R + +
Sbjct: 205 DRERVFIV 212
>UniRef50_A6E290 Cluster: Putative uncharacterized protein; n=1;
Roseovarius sp. TM1035|Rep: Putative uncharacterized
protein - Roseovarius sp. TM1035
Length = 341
Score = 38.7 bits (86), Expect = 0.15
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 2/103 (1%)
Frame = +3
Query: 294 KIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKGF--ECS 467
K D ++ PPCQ + + NDPR + F+ I L + +++ENV G S
Sbjct: 52 KTDLLIAGPPCQGHSNLNNHTRRNDPRNDLFVATAAIAVALEA-KAVVIENVPGVVRSHS 110
Query: 468 TVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRN 596
V L L G+ + +L +G +R RY+ IA ++
Sbjct: 111 DVVELARRLLASEGYAVADRVLRMDDLGGWQTRARYFMIAVKD 153
>UniRef50_Q65GH2 Cluster: Putative uncharacterized protein; n=2;
Bacillus licheniformis ATCC 14580|Rep: Putative
uncharacterized protein - Bacillus licheniformis (strain
DSM 13 / ATCC 14580)
Length = 256
Score = 38.3 bits (85), Expect = 0.20
Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Frame = +3
Query: 384 FLYFIDILDKLNTLQYILMENVKGFECSTVRN---LFVEKLTYCGFVYQEFMLSPVSVGV 554
F +++D +++L ++ ENVKG + L +E+ G+ Q F+L+ ++G
Sbjct: 129 FFHYLDAVERLRPKIFVA-ENVKGMVSGNAKGYVKLVIERTKEIGYDVQLFLLNAATMGA 187
Query: 555 PNSRLRYYCIAKRNN 599
P R R + I +R +
Sbjct: 188 PQRRERVFFICRRKD 202
>UniRef50_A7GF25 Cluster: DNA (Cytosine-5-)-methyltransferase; n=1;
Clostridium botulinum F str. Langeland|Rep: DNA
(Cytosine-5-)-methyltransferase - Clostridium botulinum
(strain Langeland / NCTC 10281 / Type F)
Length = 547
Score = 38.3 bits (85), Expect = 0.20
Identities = 29/120 (24%), Positives = 57/120 (47%), Gaps = 2/120 (1%)
Frame = +3
Query: 99 HRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQ-SLTP 275
++I++L++G GG+ + E T K ++VA ++ N A Y N + ++
Sbjct: 2 YKIVDLFAGAGGLSLGF-EMTEKFEIVAFVENNKNAAKTYLKNHSNIKNYEDILKLDFND 60
Query: 276 IEIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFL-YFIDILDKLNTLQYILMENVK 452
I ID V+ PPCQ F+ + + +N + +++ + + ++ MENVK
Sbjct: 61 ILSSNPNIDVVIGGPPCQGFSNANRQRRKLINGSNELVKKYVEAIRVIKPSVFV-MENVK 119
>UniRef50_A4U323 Cluster: Modification methylase MthTI; n=1;
Magnetospirillum gryphiswaldense|Rep: Modification
methylase MthTI - Magnetospirillum gryphiswaldense
Length = 356
Score = 38.3 bits (85), Expect = 0.20
Identities = 32/122 (26%), Positives = 53/122 (43%), Gaps = 4/122 (3%)
Frame = +3
Query: 246 FTKNIQSLTPIEIEKYKIDTVLMSP-PCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNT 422
F + +S+T + Y T+++ PCQPF++ G L D R + F + +
Sbjct: 63 FPVDTRSITETGVTDYGSPTIMLGGFPCQPFSKAGNQLGGQDARGQMGVVFAEKIMAAKP 122
Query: 423 LQYILMENVKGFECS-TVRNLFVEKLTYCG--FVYQEFMLSPVSVGVPNSRLRYYCIAKR 593
+I ENV F +++ L G +V +L+ GVP SR R + I R
Sbjct: 123 PAFI-CENVAPFLTKPEFADVYGAMLAVWGDAYVVTPTLLNACHYGVPQSRERAFIIGYR 181
Query: 594 NN 599
+
Sbjct: 182 RD 183
>UniRef50_A6SAR0 Cluster: Cytosine-specific methyltransferase; n=2;
Sclerotiniaceae|Rep: Cytosine-specific methyltransferase
- Botryotinia fuckeliana B05.10
Length = 1126
Score = 38.3 bits (85), Expect = 0.20
Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 3/101 (2%)
Frame = +3
Query: 294 KIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKGFECSTV 473
K+D + +SPPCQ F+ +ND + L+ + + K+ + + +E G
Sbjct: 803 KVDILHLSPPCQYFSPAHTVEGKNDEMNTASLFAVAAVIKVAKPRVVTLEQTFGILYPRF 862
Query: 474 RNLF---VEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIA 587
R F + T CGF + ++ G+P R R IA
Sbjct: 863 RGYFSSLICMFTSCGFSLRWAIVPLAQWGLPQRRFRLIIIA 903
>UniRef50_P31974 Cluster: Modification methylase AluI; n=1;
Cellulosimicrobium cellulans|Rep: Modification methylase
AluI - Cellulosimicrobium cellulans (Arthrobacter
luteus)
Length = 521
Score = 38.3 bits (85), Expect = 0.20
Identities = 31/123 (25%), Positives = 59/123 (47%), Gaps = 4/123 (3%)
Frame = +3
Query: 96 EHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLL--FTKNIQSL 269
++ ++L++GIGG H A + G A++I+ A VY+ N+ + L T +
Sbjct: 7 KYSFVDLFAGIGGFHAAL--AATGGVCEYAVEIDREAAAVYERNWNKPALGDITDDAND- 63
Query: 270 TPIEIEKYK--IDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILME 443
+ + Y ID + PCQPF+++G + R F I+++ +++E
Sbjct: 64 EGVTLRGYDGPIDVLTGGFPCQPFSKSGAQHGMAETRGTLFWNIARIIEEREP-TVLILE 122
Query: 444 NVK 452
NV+
Sbjct: 123 NVR 125
>UniRef50_Q2W863 Cluster: Cytosine-specific methyltransferase; n=5;
root|Rep: Cytosine-specific methyltransferase -
Magnetospirillum magneticum (strain AMB-1 / ATCC 700264)
Length = 620
Score = 37.9 bits (84), Expect = 0.27
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Frame = +3
Query: 228 FPETLLFTK-----NIQSLTPIE--IEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSF 386
FP T+L + N+ +T I+ + KID ++ PCQ F+ G +D R N
Sbjct: 54 FPSTVLAHRYPAIPNLGDMTAIDGLAWRGKIDVLVGGTPCQAFSVAGLRKSLDDARGNLA 113
Query: 387 LYFIDILDKLNTLQYILMENVKGFECSTVRNLF 485
L F+++ D ++ +++ ENV G ST N F
Sbjct: 114 LTFVELADAIDP-AWVIWENVPGV-LSTRDNAF 144
>UniRef50_Q6SZ18 Cluster: Chromosome partitioning protein parB; n=6;
Firmicutes|Rep: Chromosome partitioning protein parB -
Streptococcus pyogenes
Length = 388
Score = 37.9 bits (84), Expect = 0.27
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 6/119 (5%)
Frame = +3
Query: 246 FTKNIQSLTPIEIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDIL---DKL 416
++ +I L P +I K I T PCQ + GK R+ F +D+L +
Sbjct: 52 YSDDITKLKPNDIPKADIWTA--GSPCQNVSIAGKRAGLRAERSGLFFTLVDLLKSQSEE 109
Query: 417 NTLQYILMENVKGFECSTVRNLFVE---KLTYCGFVYQEFMLSPVSVGVPNSRLRYYCI 584
+ +++++ENVKG S F++ +L G+ + + + GVP +R R Y I
Sbjct: 110 DKPEWLILENVKGLLSSRRGVDFLDYLLELDEAGYDLEWQVFNSKDYGVPQNRERVYTI 168
>UniRef50_A4E6H8 Cluster: Cytosine-specific methyltransferase; n=3;
Listeria monocytogenes|Rep: Cytosine-specific
methyltransferase - Listeria monocytogenes HPB2262
Length = 332
Score = 37.9 bits (84), Expect = 0.27
Identities = 41/184 (22%), Positives = 79/184 (42%), Gaps = 7/184 (3%)
Frame = +3
Query: 84 EEKMEHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQ 263
E K +ILEL+ GIG A + K + ++I A Y F +
Sbjct: 4 EAKWMVQILELFGGIGAPRKALENLGVDIKSLDYVEILPFAVQAYNNIFSNDYV------ 57
Query: 264 SLTPIEIEKYK--IDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNT--LQY 431
P ++ K+ +D ++ PCQ +++NG N + N R+ + ++I+ T +
Sbjct: 58 ---PQDVTKWNMSVDLLIHGSPCQDWSKNGLN-NINTGRSILYERTLEIIKSELTPRPKK 113
Query: 432 ILMENVKGFECSTVR---NLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNNT 602
++ ENV R + ++E + G+ +L+ G+P +R R + ++ N
Sbjct: 114 VVWENVPNLLSDRHRMHFDHYLESMELFGYTNHFKILNARDYGIPQNRERVFVVSVLGNN 173
Query: 603 WNFK 614
F+
Sbjct: 174 KEFQ 177
>UniRef50_Q5CUG1 Cluster: Putative uncharacterized protein; n=3;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium parvum Iowa II
Length = 2691
Score = 37.9 bits (84), Expect = 0.27
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
Frame = -3
Query: 496 NFSTNKFRTVEHSNPLTFSIKIY*RVFNLSNISMKYKNELVLGSFSSKFFPLRVKGWQGG 317
N S + +T +H T + N SNI + + + + +FSS FFP+ + + G
Sbjct: 95 NESVLEVKTAKHGLTKTIENSEIILIDNFSNIPIDRQRIIAIVNFSSGFFPVSIDRFNSG 154
Query: 316 DMRTVSILYFSISIGVKDC---IFLVNNSVSGKLYL 218
+ + + S G C IF+VN+S K Y+
Sbjct: 155 YSIEIGNIITTESKGATPCENGIFVVNSSFIQKFYI 190
>UniRef50_Q8RNY6 Cluster: M5 cytosine DNA methyltransferase; n=3;
Bacteria|Rep: M5 cytosine DNA methyltransferase -
Escherichia coli
Length = 396
Score = 37.5 bits (83), Expect = 0.36
Identities = 30/124 (24%), Positives = 61/124 (49%), Gaps = 8/124 (6%)
Frame = +3
Query: 108 LELYSGIGGMHCAWNESTIKGKVVAAID---INTVANDVYKY----NFPETLLFTKNIQS 266
++L+SG GG+ + + + I+ + T +N+V+K + + F+K
Sbjct: 152 IDLFSGAGGLGLGFKWAGWTPLLANDIEEKYLQTYSNNVHKEVLCGSISDNETFSKIADK 211
Query: 267 LTPIEIEKY-KIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILME 443
++ + + K +L PPCQ F+ G +DPR + F+++ +L+++ +I E
Sbjct: 212 ISGFKKLYFDKQLWILGGPPCQGFSTAGNARTMDDPRNSLFMHYKSLLNEIKPNGFI-FE 270
Query: 444 NVKG 455
NV G
Sbjct: 271 NVAG 274
>UniRef50_Q4BWQ8 Cluster: C-5 cytosine-specific DNA methylase; n=2;
Bacteria|Rep: C-5 cytosine-specific DNA methylase -
Crocosphaera watsonii
Length = 417
Score = 37.5 bits (83), Expect = 0.36
Identities = 41/172 (23%), Positives = 72/172 (41%), Gaps = 6/172 (3%)
Frame = +3
Query: 102 RILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLF---TKNIQSLT 272
++L L+SG GG+ ++ + + + +I A N P+ +F N+++
Sbjct: 81 KVLSLFSGGGGLDLGFDHAGFQH--YQSYEIIRDAAVTIMQNRPQWNVFYGDDGNVKNKN 138
Query: 273 PIEIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVK 452
K +ID + PPCQPF+ G D R + F FI + + ++ ENVK
Sbjct: 139 -WSFLKNQIDVIHGGPPCQPFSIAGHQNGGEDDR-DLFPEFIRAILAIEPTAFV-AENVK 195
Query: 453 GFECSTVRNLFVEKL---TYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNN 599
+ +K+ + F LS S GVP R R + + + +
Sbjct: 196 ALRNKKFKGYLNQKIIAPLSQNYKILIFELSAASFGVPQKRDRIFIVGLKKD 247
>UniRef50_A6WVF7 Cluster: Cytosine-specific methyltransferase; n=1;
Ochrobactrum anthropi ATCC 49188|Rep: Cytosine-specific
methyltransferase - Ochrobactrum anthropi (strain ATCC
49188 / DSM 6882 / NCTC 12168)
Length = 283
Score = 37.5 bits (83), Expect = 0.36
Identities = 29/118 (24%), Positives = 56/118 (47%), Gaps = 2/118 (1%)
Frame = +3
Query: 102 RILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIE 281
R+L+L+SGIGG E T + VA +I V ++PE + +++ LT +
Sbjct: 5 RVLDLFSGIGGFSLGL-ERTGGFETVAFCEIEEFPRRVLAKHWPEVPCY-HDVRELTAAK 62
Query: 282 I--EKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENV 449
+ + ID + PCQ + G R+ + + ++ +L +++++ENV
Sbjct: 63 LASDGIAIDVICGGFPCQDISTAGHGAGLEGERSGLWSEYARLIGELRP-KFVIVENV 119
>UniRef50_P34878 Cluster: Modification methylase ScrFIB; n=1;
Lactococcus lactis subsp. cremoris|Rep: Modification
methylase ScrFIB - Lactococcus lactis subsp. cremoris
(Streptococcus cremoris)
Length = 360
Score = 37.5 bits (83), Expect = 0.36
Identities = 39/163 (23%), Positives = 72/163 (44%), Gaps = 8/163 (4%)
Frame = +3
Query: 255 NIQSLTPIEIEKYKIDTVLMSPPCQPFTRNG--KNLDENDPRTNSFLYFIDILDKLNTLQ 428
+I+S+ P ++ + D S PCQ + G L + +S L+ + + +
Sbjct: 106 DIRSIDPKKLPDF--DFFTYSFPCQDISVAGYQNGLVADSGTRSSLLWECCKIIEHKKPK 163
Query: 429 YILMENVKGFECSTVR---NLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIA--KR 593
Y++MENVK + N F+ L G+ +L+ G+P +R R +CI+
Sbjct: 164 YLMMENVKNLVGKNHKVNFNKFLLYLESLGYTNYWDILNARDFGIPQNRERVFCISILNP 223
Query: 594 NNTWNFKRKDELITCLPKTFAKPHCLKDIIENN-VPDDYLVPD 719
N + F +K L + + K ++NN V D+ ++ D
Sbjct: 224 NEDFTFPQKQNLTLSMNDLLEENVSEKFYLKNNQVSDEPILQD 266
>UniRef50_Q8CWG2 Cluster: Cytosine-specific methyltransferase; n=20;
Bacteria|Rep: Cytosine-specific methyltransferase -
Bifidobacterium longum
Length = 323
Score = 37.1 bits (82), Expect = 0.47
Identities = 55/228 (24%), Positives = 98/228 (42%), Gaps = 18/228 (7%)
Frame = +3
Query: 96 EHRILELYSGIGGMHCAWNEST-IKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLT 272
E RI +L++GIGG+ ++ VV + + N + Y+ N+ + +I +
Sbjct: 3 EIRIADLFAGIGGIRMGMVQALGDAAHVVYSSEWNKYSVQTYEANWHDENPVAGDITKVD 62
Query: 273 PIEIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSF------LYFIDI--LDKLNTLQ 428
++ ID +L PCQPF+ G + ++ R F F D+ + K +
Sbjct: 63 EHDVPD--IDLLLAGFPCQPFSIAGVSKKQSMGRPTGFEDKTQGTLFFDVARIIKAKQPK 120
Query: 429 YILMENVK-------GFECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIA 587
L+ENVK G T+ ++ E L Y + + L + VP R R Y +
Sbjct: 121 AFLLENVKNLLSHDRGRTFKTIYSVLTEDLGY----HVTYKLIDAAGFVPQHRERTYIVG 176
Query: 588 -KRNNTWNFKRKDELITCLPKTFAKPHCLKDII-ENNVPDDYLVPDKM 725
+ N + F D++ K A + ++ + VPD Y++ DK+
Sbjct: 177 FREENGFTF---DDV-----KPIAHGNVGSILLPASQVPDKYVLSDKL 216
>UniRef50_Q607Y5 Cluster: Cytosine-specific methyltransferase; n=4;
Bacteria|Rep: Cytosine-specific methyltransferase -
Methylococcus capsulatus
Length = 345
Score = 37.1 bits (82), Expect = 0.47
Identities = 38/168 (22%), Positives = 67/168 (39%), Gaps = 12/168 (7%)
Frame = +3
Query: 105 ILELYSGIGGMHCAWNES-TIKGK--------VVAAIDINTVANDVYKYNFPETLLFTKN 257
++ L+SG GGM + GK V+ A +IN A Y+ N +
Sbjct: 44 VISLFSGCGGMDLGFRGGFEFLGKRYAKLPFNVIWANEINEAACQTYRRNLGSHIHHGDI 103
Query: 258 IQSLTPIEIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYIL 437
Q + + E D V+ PCQ + NGK N R+ + ++++ ++ ++
Sbjct: 104 WQMMDSLPPEA---DVVIGGFPCQDISVNGKGAGINGQRSGLYRAMVEVVRRVRPKVFV- 159
Query: 438 MENVKGF---ECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLR 572
ENVKG + ++ + G+ + GVP +R R
Sbjct: 160 AENVKGLLMRHHADALKTVLDDFSALGYSVTHQLYLAADYGVPQTRER 207
>UniRef50_UPI00015C4900 Cluster: glutathionylspermidine synthase
family protein; n=1; Campylobacter concisus 13826|Rep:
glutathionylspermidine synthase family protein -
Campylobacter concisus 13826
Length = 203
Score = 36.7 bits (81), Expect = 0.62
Identities = 33/123 (26%), Positives = 52/123 (42%), Gaps = 4/123 (3%)
Frame = +3
Query: 102 RILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIE 281
+IL L++GIGG W ++ + G V A++ + Y +P + +
Sbjct: 2 KILNLFAGIGGNRLLW-DNVLPGVKVTAVEFDPEIAKAYAKRYPNDNVIVGDAWDYAAKN 60
Query: 282 IEKYKIDTVLMSPPCQPFTR-NGKNLDEND--PRTNSF-LYFIDILDKLNTLQYILMENV 449
+ D + SPPCQ +R N N ND R F LY + + K ++ENV
Sbjct: 61 YLDF--DFIWASPPCQTHSRLNIANNIRNDRTKRLPDFRLYELIVYLKYFCKNTFVVENV 118
Query: 450 KGF 458
F
Sbjct: 119 VPF 121
>UniRef50_Q4UN69 Cluster: Cytosine-specific methyltransferase; n=2;
Bacteria|Rep: Cytosine-specific methyltransferase -
Rickettsia felis (Rickettsia azadi)
Length = 105
Score = 36.7 bits (81), Expect = 0.62
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Frame = +3
Query: 99 HRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPI 278
++ ++L+ GIGG A ++ V + DI+ + YK NF + K +T I
Sbjct: 2 YKFIDLFCGIGGFRKALEAKGLE--CVFSSDIDKDVQEAYKRNFGD-----KPYGDITEI 54
Query: 279 EIEKY-KIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDI 404
K K D + PCQ F+ +GK L +D F I I
Sbjct: 55 SENKIPKHDILCAGFPCQSFSISGKRLGIDDINGRLFYEIIRI 97
>UniRef50_Q9RQS3 Cluster: Cytosine-specific methyltransferase; n=2;
Mycoplasma mycoides subsp. capri|Rep: Cytosine-specific
methyltransferase - Mycoplasma mycoides subsp. capri
Length = 390
Score = 36.7 bits (81), Expect = 0.62
Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 6/135 (4%)
Frame = +3
Query: 249 TKNIQSLTPIEIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKL---N 419
T NI+ L + ID + S PCQ ++ G N+ + LY ++ + KL N
Sbjct: 132 TTNIKELNTLP---KNIDILTYSFPCQDISQQGVRRGINEYTRSGLLYEVERILKLNRDN 188
Query: 420 TLQYILMENVKGFECSTVR---NLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAK 590
+ +L+ENVK N ++ L G+ +++ G +R R +CI+
Sbjct: 189 LPKVLLLENVKALTNKLFLKDFNKWLNALENLGYKSIWKVVNSTDYGSCQNRERVFCISY 248
Query: 591 RNNTWNFKRKDELIT 635
+ NF LIT
Sbjct: 249 LDKQKNFTFPKPLIT 263
>UniRef50_A2BPL0 Cluster: Cytosine-specific methyltransferase; n=5;
cellular organisms|Rep: Cytosine-specific
methyltransferase - Prochlorococcus marinus (strain
AS9601)
Length = 698
Score = 36.7 bits (81), Expect = 0.62
Identities = 40/190 (21%), Positives = 83/190 (43%), Gaps = 19/190 (10%)
Frame = +3
Query: 87 EKMEHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFP----ETLLFTK 254
+K + ++L+SG GG+ + + V+ A DI + ++++F E L +
Sbjct: 48 KKEPYFAVDLFSGAGGLSLGLHRANFD--VILACDIRNDSIMTHRHHFGGCSYECDLSKR 105
Query: 255 NIQSLTPIEIEKY-KIDTVLMSPPCQPFTRN-----------GKNLDENDPRTNSFLYFI 398
+ + ++ K +I + PPCQPF+RN ++ + N+ R + FI
Sbjct: 106 KVINEISEQLNKCGEISLIAGGPPCQPFSRNIKWRKHNEEVSAQHQELNEDRRELWESFI 165
Query: 399 DILDKLNTLQYILMENVKGFECSTVRNLF---VEKLTYCGFVYQEFMLSPVSVGVPNSRL 569
I++++ + LMENV + + ++ + + G+ ++ GVP R
Sbjct: 166 SIVEQVKPKAF-LMENVTDIAQTGEQEIYRSIINRAEKAGYRINPKLIYAWQYGVPQLRP 224
Query: 570 RYYCIAKRNN 599
R + + N
Sbjct: 225 RLFISGTKIN 234
>UniRef50_A6R638 Cluster: Cytosine-specific methyltransferase; n=1;
Ajellomyces capsulatus NAm1|Rep: Cytosine-specific
methyltransferase - Ajellomyces capsulatus NAm1
Length = 699
Score = 36.7 bits (81), Expect = 0.62
Identities = 29/135 (21%), Positives = 53/135 (39%), Gaps = 2/135 (1%)
Frame = +3
Query: 189 DINTVANDVYKYNFPETLLFTKNIQSLTPIEIEKYKIDTVLMSPPCQPFTRNGKNLDEND 368
D + A D ++ NF + +T ++ + +D + SPPCQ F+ D
Sbjct: 351 DHSVSAMDSFRLNFETAIGYTSDVADFLANSHTEIMVDILHFSPPCQTFSPAKTVAAAMD 410
Query: 369 PRTNSFLYFIDILDKLNTLQYILMENVKGFECSTVRNLF--VEKLTYCGFVYQEFMLSPV 542
+ ++ L + + + ME G + LF + G+ + +L+
Sbjct: 411 DDNEACIFCTRGLLEATKPRVVTMEETAGLQQRHEEFLFATIHSFVELGYSVRWKLLNCR 470
Query: 543 SVGVPNSRLRYYCIA 587
GVP SR R +A
Sbjct: 471 DYGVPQSRQRLVILA 485
>UniRef50_Q97IY5 Cluster: Cytosine-specific methyltransferase; n=1;
Clostridium acetobutylicum|Rep: Cytosine-specific
methyltransferase - Clostridium acetobutylicum
Length = 415
Score = 36.3 bits (80), Expect = 0.82
Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 8/114 (7%)
Frame = +3
Query: 279 EIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTL----QYILMEN 446
+I KID + PCQ F+ G+ +D R N F+ I ++ L+++ + + +EN
Sbjct: 113 QILSSKIDVLNGGFPCQAFSIAGEQKGFDDHRGNLFISIIKLIRLLDSVHGKPRVLFLEN 172
Query: 447 VKGF---ECSTVRNLFVEKLTYCGFVYQEFMLSPVSVG-VPNSRLRYYCIAKRN 596
VK + + KL G++ +E +L+ + +P +R R Y + N
Sbjct: 173 VKNLMSHDGGRTYKVIKSKLEKEGYIIKEKVLNTMDFSHLPQNRERIYIVGFLN 226
>UniRef50_Q60171 Cluster: M5C-multispecific methyltransferase (EC
2.1.1.37) (DNA (Cytosine-5-)- methyltransferase); n=1;
Geobacillus stearothermophilus|Rep: M5C-multispecific
methyltransferase (EC 2.1.1.37) (DNA (Cytosine-5-)-
methyltransferase) - Bacillus stearothermophilus
(Geobacillus stearothermophilus)
Length = 534
Score = 36.3 bits (80), Expect = 0.82
Identities = 37/166 (22%), Positives = 69/166 (41%), Gaps = 3/166 (1%)
Frame = +3
Query: 105 ILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIEI 284
+ EL++G G M + +V A D + A Y++N + ++ +I ++ P +I
Sbjct: 16 VAELFAGGGLMAVGLRAAGYN--LVWANDFDKSACAAYRHNLGDHIVHG-DITAIDPADI 72
Query: 285 EKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKGFEC 464
D + PPCQ ++ G E R ++ I++ +I ENVKG
Sbjct: 73 PD--TDVIAGGPPCQDYSVAGTGAGEEGERGKLVWAYLRIIEAKRPKAFI-FENVKGLIT 129
Query: 465 STVRNLF---VEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKR 593
R F +++ G+ +++ GV R R + + R
Sbjct: 130 KKHRPTFDALLKQFKIIGYNVSWKLINAWDYGVAQKRERVFIVGIR 175
>UniRef50_A5NRD5 Cluster: Cytosine-specific methyltransferase; n=1;
Methylobacterium sp. 4-46|Rep: Cytosine-specific
methyltransferase - Methylobacterium sp. 4-46
Length = 423
Score = 36.3 bits (80), Expect = 0.82
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +3
Query: 294 KIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKG 455
KID + PPCQ F+ G+ DPR +++ +D + + +L+ENV+G
Sbjct: 86 KIDLLAGGPPCQGFSSAGRR-HPGDPRNQLVERYLEFVDAIRP-KMVLIENVRG 137
>UniRef50_A5IYC0 Cluster: Cytosine-specific methyltransferase; n=3;
Mycoplasma|Rep: Cytosine-specific methyltransferase -
Mycoplasma agalactiae
Length = 372
Score = 36.3 bits (80), Expect = 0.82
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 8/123 (6%)
Frame = +3
Query: 255 NIQSLTPIEIEKYKIDTVLMSPPCQPFT----RNGKNLDENDPRTNSFLYFIDILDKL-N 419
+I L P I+K KID + S PCQ + K ++ + ++N IL++
Sbjct: 75 DINCLDPAIIKKLKIDLITYSFPCQGLSIANMGRAKGINNEESKSNLVWQIYRILNESPY 134
Query: 420 TLQYILMENVKGFECSTVRNLF---VEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAK 590
+Y+LMENV + ++ + KL+ G+ +L+ + G R R + ++
Sbjct: 135 KPKYLLMENVPNLLSNKFKDEYEHWKNKLSELGYKTFTIILNSIDCGSIQHRRRVFAVSV 194
Query: 591 RNN 599
N
Sbjct: 195 LKN 197
>UniRef50_A7NVV8 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=7; Eukaryota|Rep: Chromosome chr5
scaffold_2, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 691
Score = 36.3 bits (80), Expect = 0.82
Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 14/120 (11%)
Frame = +3
Query: 105 ILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYK---YNFPET--LLFTKNIQSL 269
+L L+SGIGG ++ I K V +++I+ ++ K +N +T L+ +IQ L
Sbjct: 566 MLSLFSGIGGAELTLHQLGIHLKGVVSVEISETKRNILKKWWHNTGQTGELVQIDDIQKL 625
Query: 270 TPIE----IEKY-KIDTVLMSPPCQPFTRNGKNLDENDPRT----NSFLYFIDILDKLNT 422
+ IEK+ D V+ PC +RN K + + D T + F F+ +L ++ +
Sbjct: 626 ASSKLESLIEKFGGFDFVICQNPCTYSSRNSKMVADGDSLTGFDFSLFCEFVRVLHRVRS 685
>UniRef50_Q8Q059 Cluster: DNA-cytosine methyltransferase; n=3;
Euryarchaeota|Rep: DNA-cytosine methyltransferase -
Methanosarcina mazei (Methanosarcina frisia)
Length = 423
Score = 36.3 bits (80), Expect = 0.82
Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 7/112 (6%)
Frame = +3
Query: 282 IEKYKIDTVLMSPPCQPFTRNGKNLD----ENDPRTNSFLYFIDILDKLNTLQYILMENV 449
I+ +D V+ PPCQ ++ G+ ++DPR + ++I L + + ENV
Sbjct: 111 IDSDSVDVVIGGPPCQAYSVAGRGRKPKEMKDDPRNYLYRHYISFLKSFEP-KIFVFENV 169
Query: 450 KGFECSTVRNLFV---EKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRN 596
G + + +F E+L G+ + ML+ V R R I +N
Sbjct: 170 PGIKSAINGIIFSNLHEELEKLGYKTEAHMLNAKDFSVLQERNRIIFIGWKN 221
>UniRef50_Q027X8 Cluster: DNA-cytosine methyltransferase; n=3;
Bacteria|Rep: DNA-cytosine methyltransferase -
Solibacter usitatus (strain Ellin6076)
Length = 423
Score = 35.9 bits (79), Expect = 1.1
Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 4/89 (4%)
Frame = +3
Query: 318 PPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKGFECSTVRNLFVE-- 491
PPC F+ GKN +++++ K + L ENVKG + F E
Sbjct: 118 PPCPDFSVGGKNRGREGDNGKLSATYVELISKQKP-DFFLFENVKGLWQTKAHRAFYEEL 176
Query: 492 --KLTYCGFVYQEFMLSPVSVGVPNSRLR 572
KL +V E +++ + P R R
Sbjct: 177 KTKLHKARYVTTERLINTLDYAAPQDRAR 205
>UniRef50_A5FE12 Cluster: Putative uncharacterized protein; n=1;
Flavobacterium johnsoniae UW101|Rep: Putative
uncharacterized protein - Flavobacterium johnsoniae
UW101
Length = 216
Score = 35.9 bits (79), Expect = 1.1
Identities = 22/85 (25%), Positives = 40/85 (47%)
Frame = +3
Query: 102 RILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIE 281
++L LY+GIGG W + T V A++++ VY +FP+ + + +
Sbjct: 2 KVLNLYAGIGGNRKNWTDVT-----VTAVELDPQLAAVYAEHFPQDTVVVGDAHQY--LI 54
Query: 282 IEKYKIDTVLMSPPCQPFTRNGKNL 356
+ D + SPPCQ + +N+
Sbjct: 55 DHHNEFDFIWSSPPCQSHSSFRQNI 79
>UniRef50_Q4Y014 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 305
Score = 35.9 bits (79), Expect = 1.1
Identities = 20/56 (35%), Positives = 32/56 (57%)
Frame = +3
Query: 195 NTVANDVYKYNFPETLLFTKNIQSLTPIEIEKYKIDTVLMSPPCQPFTRNGKNLDE 362
N +N + N + +L T +I +LT +++K +L+S PCQP+TR KN E
Sbjct: 135 NPNSNFMSDLNNKDYILQT-DINNLTAEFFDRFKFYILLISNPCQPYTRLNKNFKE 189
>UniRef50_Q2U949 Cluster: Predicted protein; n=1; Aspergillus
oryzae|Rep: Predicted protein - Aspergillus oryzae
Length = 586
Score = 35.9 bits (79), Expect = 1.1
Identities = 35/159 (22%), Positives = 59/159 (37%), Gaps = 2/159 (1%)
Frame = +3
Query: 117 YSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIEIEKYK 296
+ G GG+ C + + K A D + A Y+ NF +I S E +
Sbjct: 322 FCGAGGVSCGARRAGLYNKW--AFDNSEHATSTYRLNFEHAYCELSDIFSFLTSNDEFLR 379
Query: 297 IDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKGF--ECST 470
+D SPPCQ ++ ND ++ ++ L + + ME G
Sbjct: 380 VDVSHSSPPCQTWSSAHTIEGANDDANSACVFSSADLIRRAKPRVHTMEETNGLLDRHRD 439
Query: 471 VRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIA 587
+ + G+ + +L + GVP +R R IA
Sbjct: 440 TLHRVINDFIEIGYSVRWGILRLLEYGVPQTRKRLLVIA 478
>UniRef50_O42731 Cluster: Cytosine-specific methyltransferase; n=2;
Ascobolus immersus|Rep: Cytosine-specific
methyltransferase - Ascobolus immersus
Length = 1356
Score = 35.9 bits (79), Expect = 1.1
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = +3
Query: 285 EKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKGFEC 464
+K ++D + PPCQ F+ + ND + + F+ +D +++L+ENVKG
Sbjct: 868 KKGEVDFIYGGPPCQGFSGVNRYKKGNDIKNSLVATFLSYVDHYKP-RFVLLENVKGLIT 926
Query: 465 STVRN 479
+ + N
Sbjct: 927 TKLGN 931
>UniRef50_Q1ZE17 Cluster: DNA-methyltransferase; n=1; Psychromonas
sp. CNPT3|Rep: DNA-methyltransferase - Psychromonas sp.
CNPT3
Length = 380
Score = 35.5 bits (78), Expect = 1.4
Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 10/121 (8%)
Frame = +3
Query: 297 IDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQY----ILMENVKGF-- 458
ID + PCQ F+ G +D R N F ID+++ L + Y + +ENVK
Sbjct: 88 IDVLTAGFPCQAFSIAGSRKGFDDHRGNLFYSIIDLVNDLGKVAYKPRILFLENVKNLRS 147
Query: 459 -ECSTVRNLFVEKLTYCGFVYQEFMLSPVS-VGVPNSRLRYY--CIAKRNNTWNFKRKDE 626
+ + ++ G++ ++ L+ + +P +R R + C K+++ F ++
Sbjct: 148 HDQGRTYQVIKSEIENAGYIVKDATLNTKTYTTLPQNRERMFIVCFLKQSDADKFTLFEQ 207
Query: 627 L 629
L
Sbjct: 208 L 208
>UniRef50_A1JNI9 Cluster: Cytosine-specific methyltransferase; n=1;
Yersinia enterocolitica subsp. enterocolitica 8081|Rep:
Cytosine-specific methyltransferase - Yersinia
enterocolitica serotype O:8 / biotype 1B (strain 8081)
Length = 452
Score = 35.5 bits (78), Expect = 1.4
Identities = 18/58 (31%), Positives = 33/58 (56%)
Frame = +3
Query: 294 KIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKGFECS 467
+ID V+ PPCQ F+ G+ + DPR ++ ++ + +Y+++ENV G + S
Sbjct: 83 EIDLVVGGPPCQGFSSAGRR-NPLDPRNQLAYDYLKVVSLVKP-KYLILENVVGIQYS 138
>UniRef50_Q8IIK0 Cluster: Oligosacharyl transferase STT3 subunit,
putative; n=3; Plasmodium|Rep: Oligosacharyl transferase
STT3 subunit, putative - Plasmodium falciparum (isolate
3D7)
Length = 866
Score = 35.5 bits (78), Expect = 1.4
Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 3/98 (3%)
Frame = +3
Query: 321 PCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQ---YILMENVKGFECSTVRNLFVE 491
P P N + DEN NS +IL++ NT++ + E KG +C+ N++V+
Sbjct: 556 PNIPSNGNVLDKDENVSSLNSMRRHENILEEFNTIKNDIKYMGEYKKGIKCNNNTNIYVK 615
Query: 492 KLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNNTW 605
KL + + + SV + L Y + ++TW
Sbjct: 616 KLNFNKLERRNNISILTSVSIVLMLLYYVILIILHSTW 653
>UniRef50_A2ENS5 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1602
Score = 35.5 bits (78), Expect = 1.4
Identities = 39/131 (29%), Positives = 56/131 (42%), Gaps = 2/131 (1%)
Frame = +3
Query: 312 MSPPCQPFTRNGKNLDENDPRTNSFL-YFIDILDKLNTLQYILMENVKGFECSTVRNLFV 488
+SP RN L EN + + + Y ID+ +LN +Y++ +K FE + LFV
Sbjct: 373 LSPLLDEDIRN--KLKENKDKADELITYLIDLSRELNMNEYMINYAMKIFEEYGLMELFV 430
Query: 489 EKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNNTWNFKRKDELITCLPKTFAKPH- 665
K+ Q F + N + Y I N N D+ I LP FA P+
Sbjct: 431 TKIVENDPKQQFFFV--------NEKFFDYVIKFSKNIANV---DDFILSLPSKFANPNK 479
Query: 666 CLKDIIENNVP 698
L+ ENN P
Sbjct: 480 ILEYSYENNKP 490
>UniRef50_Q2U3E6 Cluster: Predicted protein; n=1; Aspergillus
oryzae|Rep: Predicted protein - Aspergillus oryzae
Length = 325
Score = 35.5 bits (78), Expect = 1.4
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = -3
Query: 496 NFSTNKFRTVEHSNPLTFSIKIY*R-VFNLSNISMKYKNELVLGSFSSKFFPLRVKGWQG 320
NFST+K+ +EH + KI R N S+I + + L + + + ++ WQG
Sbjct: 103 NFSTSKYNLIEHKPDAPITQKILVRAASNASSIKLMMEKLKDLITITKEVILATIRDWQG 162
Query: 319 GDMRTVSILY 290
D T+ I+Y
Sbjct: 163 AD--TIKIIY 170
>UniRef50_A6RJV4 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 861
Score = 35.5 bits (78), Expect = 1.4
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = +3
Query: 117 YSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETL--LFTKNIQSLTPIEIEK 290
Y G GGM +T KV D N A + ++ NFP L N + P ++
Sbjct: 552 YCGAGGM--TRGAATAGLKVKWGFDFNAHAGETWQKNFPGATFHLLPVNEFAALPDPRKR 609
Query: 291 YKIDTVLMSPPCQPFT 338
ID + +SPPCQ F+
Sbjct: 610 LWIDILHLSPPCQVFS 625
>UniRef50_Q1YE76 Cluster: Possible cytosine-specific DNA methylase;
n=1; Aurantimonas sp. SI85-9A1|Rep: Possible
cytosine-specific DNA methylase - Aurantimonas sp.
SI85-9A1
Length = 541
Score = 35.1 bits (77), Expect = 1.9
Identities = 42/166 (25%), Positives = 73/166 (43%), Gaps = 4/166 (2%)
Frame = +3
Query: 102 RILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIE 281
R ++LY+GIGG + + +VVA+ + A D + N L +++ L +
Sbjct: 2 RAIDLYAGIGGWSLGLRLAGV--EVVASYEWWQAAVDTHNGNHGGDLK-PVDVRQLHLHD 58
Query: 282 IEKYKIDTVLMSPPCQPFT-RNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKGF 458
+ ID V+ SPPC F+ N + D + F++++D L ++ +ENV
Sbjct: 59 LPP-NIDLVVGSPPCTEFSYSNRGGGGDLDEGLKDLVRFMEVIDHLRP-KFWALENVPRV 116
Query: 459 ECSTVRNLFVEKLTYCGFVYQEFMLSPVS---VGVPNSRLRYYCIA 587
R + + F + E + ++ G P SR R CIA
Sbjct: 117 AQVLERGMADARHPLYRFRHLEMQIKIINFSDYGTPQSRRR--CIA 160
>UniRef50_Q184L3 Cluster: Putative uncharacterized protein; n=3;
Clostridium difficile|Rep: Putative uncharacterized
protein - Clostridium difficile (strain 630)
Length = 448
Score = 35.1 bits (77), Expect = 1.9
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +3
Query: 444 NVKGFECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNNTWNFK-RK 620
N KGF + + NL V++ YCGF++++ S ++ + +YY N N + RK
Sbjct: 224 NNKGFGFNLIMNLMVDQCGYCGFMFEKMYYSQITARITRCG-QYYKSVDYNAYENMEDRK 282
Query: 621 DE 626
+E
Sbjct: 283 EE 284
>UniRef50_A6LAB6 Cluster: Cytosine-specific methyltransferase; n=1;
Parabacteroides distasonis ATCC 8503|Rep:
Cytosine-specific methyltransferase - Parabacteroides
distasonis (strain ATCC 8503 / DSM 20701 / NCTC11152)
Length = 427
Score = 35.1 bits (77), Expect = 1.9
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = +3
Query: 114 LYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQS-LTPIEIEK 290
L+SG+GG A + + + +IN V +++FP+++ + ++ TP +
Sbjct: 6 LFSGVGGFDLA--AEWMGWENLFHCEINEWCQKVLRFHFPKSIQYDDITRTDFTPW---R 60
Query: 291 YKIDTVLMSPPCQPFTRNGKNLDENDPR 374
K+D + PCQPF+ GK D R
Sbjct: 61 GKVDVLTGGFPCQPFSTAGKRRGAEDDR 88
>UniRef50_Q8LPU5 Cluster: DNA (cytosine-5)-methyltransferase 3;
n=21; Magnoliophyta|Rep: DNA
(cytosine-5)-methyltransferase 3 - Zea mays (Maize)
Length = 915
Score = 35.1 bits (77), Expect = 1.9
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = +3
Query: 63 VNVSSTMEEKMEHRILELYSGIGGMH---CAWNE-STIKGKVVAAIDINTVANDVYKYNF 230
+ SS M E+ +L+LYSG GGM C S +K + A+D+N+ A KYN
Sbjct: 334 LETSSNMPERTA-TLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDLNSFACQSLKYNH 392
Query: 231 PET 239
P+T
Sbjct: 393 PQT 395
>UniRef50_Q47A77 Cluster: Cytosine-specific methyltransferase; n=1;
Dechloromonas aromatica RCB|Rep: Cytosine-specific
methyltransferase - Dechloromonas aromatica (strain RCB)
Length = 571
Score = 34.7 bits (76), Expect = 2.5
Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 2/127 (1%)
Frame = +3
Query: 75 STMEE-KMEHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFT 251
+TM+ K + R ++LYSGIGG + I +VVA+ + AN N + L
Sbjct: 26 NTMKSTKAKPRAIDLYSGIGGWSLGLEMAGI--EVVASYEWWDKANRTNHKN-NQHLATE 82
Query: 252 KNIQSLTPIEIEKYKIDTVLMSPPCQPFT-RNGKNLDENDPRTNSFLYFIDILDKLNTLQ 428
+I+ L ++ K ID V+ SPPC F+ N + + F+ ++D + +
Sbjct: 83 IDIRQLRLEDLPK-NIDIVVGSPPCTQFSFANRGGSGDIEDGLKDIAKFLAVVDYVRP-K 140
Query: 429 YILMENV 449
+ MENV
Sbjct: 141 HWAMENV 147
>UniRef50_Q1DHS5 Cluster: Putative uncharacterized protein; n=2;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 626
Score = 34.7 bits (76), Expect = 2.5
Identities = 39/179 (21%), Positives = 74/179 (41%), Gaps = 4/179 (2%)
Frame = +3
Query: 60 FVNVSSTMEEKMEHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPET 239
F++++ + E + ++ + + G GG+ ++ + V D A D Y+ NF
Sbjct: 315 FIDLTGSNERRTKYTFGDGFCGAGGVSRGALQAGLH--VRWGFDKCPKAMDTYRLNFRTA 372
Query: 240 LLFTKNIQSLTPIEIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFI--DILDK 413
+ T + E + +D + SPPCQ F+ K + + + N F ++L +
Sbjct: 373 VGETCEVVHFLTNETKDIMVDIMHFSPPCQTFS-PAKTVAASTDQANEACIFSARELLLR 431
Query: 414 LNTLQYILMENVKGFECSTVRNLFVEKLTY--CGFVYQEFMLSPVSVGVPNSRLRYYCI 584
+ + ME G + L+ T+ G+ + +LS GVP R R I
Sbjct: 432 VKP-RIATMEETSGLQERHKEFLYATIHTFVDLGYSIRWKLLSCEDYGVPQQRKRLVMI 489
>UniRef50_Q58600 Cluster: Probable modification methylase MJ1200;
n=4; Methanococcales|Rep: Probable modification
methylase MJ1200 - Methanococcus jannaschii
Length = 366
Score = 34.7 bits (76), Expect = 2.5
Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 12/125 (9%)
Frame = +3
Query: 240 LLFTKNIQSLTPIEIEKY----KIDTVLMSPPCQPFTRNGKNLDEN-------DPRTNSF 386
++ +I+ + IEIEK+ K+D ++ PPC+ +T ++N D
Sbjct: 101 VVINDDIREIHAIEIEKFIKNKKVDVIIGGPPCEGYTGANPKREKNPYDRLYKDETGRLV 160
Query: 387 LYFIDILDKLNTLQYILMENVKGFECSTVRNLFVEKLTYCGFVYQEF-MLSPVSVGVPNS 563
L +I I+ L + +MENV G + VR +++ G+ F L G P+
Sbjct: 161 LEYIRIVGDLQP-KIFVMENVPGIK--EVRGAIIKEFREIGYEDVYFNTLRAEDYGNPSV 217
Query: 564 RLRYY 578
R R +
Sbjct: 218 RRRVF 222
>UniRef50_Q8EL95 Cluster: Putative modification methylase OB3336;
n=1; Oceanobacillus iheyensis|Rep: Putative modification
methylase OB3336 - Oceanobacillus iheyensis
Length = 460
Score = 34.7 bits (76), Expect = 2.5
Identities = 45/202 (22%), Positives = 88/202 (43%), Gaps = 21/202 (10%)
Frame = +3
Query: 72 SSTMEEKMEHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNF-----PE 236
S+T +K +++L+SG GG+ + + + I+++ A+DV +N
Sbjct: 6 SATSTDKKLPEVVDLFSGCGGLALGFQLAGF--NIRKGIELDRDASDVASFNLHWRQGKH 63
Query: 237 TLLFTKNIQSLTPIE----IEKYKIDTVLMSPPCQPFTRNG----KNL-----DENDPRT 377
+I L+ E +++ V+ PPCQ +++ G K+L END R
Sbjct: 64 DRHLNNDITLLSANEFYNDLDRKNDLIVIGGPPCQAYSKIGRAKLKSLGEERRQENDARG 123
Query: 378 NSFLYFIDILDKLNTLQYILMENVK---GFECSTVRNLFVEKLTYCGFVYQEFMLSPVSV 548
+ F+D ++ I+MENV + + + + L G+ +L+
Sbjct: 124 KLYENFLDYALHVDA-NVIVMENVPEAVNYGGVNIPDTVCDILINKGYDAIWTVLNAADF 182
Query: 549 GVPNSRLRYYCIAKRNNTWNFK 614
GVP +R+R + +A + + K
Sbjct: 183 GVPQTRVRLFVMAIKKDIGKIK 204
>UniRef50_Q9ACM3 Cluster: Cytosine-specific methyltransferase; n=6;
Bacilli|Rep: Cytosine-specific methyltransferase -
Streptococcus thermophilus
Length = 421
Score = 34.3 bits (75), Expect = 3.3
Identities = 27/123 (21%), Positives = 56/123 (45%), Gaps = 8/123 (6%)
Frame = +3
Query: 105 ILELYSGIGGMHCAWNEST---IKGKVVAAIDINTVAND---VYKYNFPETLLFTKNIQS 266
+LEL++G+GG S K + + + + D VY Y+FP++ +I
Sbjct: 3 VLELFAGVGGFRIGLENSDKNFFKTRWSNQWEPSRKSQDAFEVYNYHFPDSENIGYSISD 62
Query: 267 LTPIEIEKYKIDTVLMSPPCQPFT--RNGKNLDENDPRTNSFLYFIDILDKLNTLQYILM 440
++ + D ++ PCQ ++ R+ KN + + + I ++ +Y+++
Sbjct: 63 ISDEKFASMDADMIVGGFPCQDYSVARSKKNEQGIEGKKGVLFWEIIRATRIIKPKYLIL 122
Query: 441 ENV 449
ENV
Sbjct: 123 ENV 125
>UniRef50_Q17YS9 Cluster: Cytosine-specific methyltransferase; n=1;
Helicobacter acinonychis str. Sheeba|Rep:
Cytosine-specific methyltransferase - Helicobacter
acinonychis (strain Sheeba)
Length = 377
Score = 34.3 bits (75), Expect = 3.3
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Frame = +3
Query: 294 KIDTVLMSPPCQPFTRNGKNLDEN----DPRTNSFLYFIDILDKLNTLQYILMENVKGFE 461
KID + PPCQ ++ G+ D++ D R F F+ I+D ++ ENV G
Sbjct: 69 KIDVIFGGPPCQAYSLAGRAQDKHSMKYDYRNYLFESFVKIVDYYQPKCFV-FENVPGML 127
Query: 462 CSTVRNLFVEKLTYCGFV 515
+ + FV+ Y F+
Sbjct: 128 SAKPGDQFVKDRIYEAFL 145
>UniRef50_A3EHV1 Cluster: Site-specific DNA methylase; n=2;
Vibrio|Rep: Site-specific DNA methylase - Vibrio
cholerae V51
Length = 505
Score = 34.3 bits (75), Expect = 3.3
Identities = 28/119 (23%), Positives = 54/119 (45%), Gaps = 1/119 (0%)
Frame = +3
Query: 105 ILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIE- 281
+++ ++G GG E + V AI+ + A D++K N PET + +++ + P+E
Sbjct: 8 VVDNFAGGGGASTGM-ELGLNRHVDIAINHDPEAIDMHKMNHPETKHYCESVWDVDPVEA 66
Query: 282 IEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKGF 458
+ SP C+ F++ K D + L ++ I++ENV+ F
Sbjct: 67 CAGRPVGLAWFSPDCKHFSK-AKGNRPVDKNIRGLAWVAIRWAALVPVRIIMLENVEEF 124
>UniRef50_A0Q1D6 Cluster: Ribonucleoside-diphosphate reductase, beta
subunit; n=6; Clostridium|Rep:
Ribonucleoside-diphosphate reductase, beta subunit -
Clostridium novyi (strain NT)
Length = 342
Score = 34.3 bits (75), Expect = 3.3
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = -2
Query: 230 KVVLVNVICDGVYIYSGYNFPFDCAFIPGTMHATNTAVKF 111
+ ++ N I +G+Y YSG++F + A G M AT+T K+
Sbjct: 173 RTIMANYILEGIYFYSGFSFFYTLA-RQGKMTATSTIFKY 211
>UniRef50_Q858D4 Cluster: Cytosine methylase; n=3; root|Rep:
Cytosine methylase - Enterobacteria phage epsilon15
Length = 389
Score = 34.3 bits (75), Expect = 3.3
Identities = 24/91 (26%), Positives = 41/91 (45%)
Frame = +3
Query: 315 SPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKGFECSTVRNLFVEK 494
S PCQPF+ GK D R + + +F ++ + Q++ E V +T +L
Sbjct: 79 SCPCQPFSAAGKGDGFADER-HLWPHFFHLISERRP-QHVFGEQVAAGNANTWFDLVQAD 136
Query: 495 LTYCGFVYQEFMLSPVSVGVPNSRLRYYCIA 587
L G+ + + +G P+ R R Y +A
Sbjct: 137 LEGVGYTFGLVPFTSAGIGAPHIRERAYWVA 167
>UniRef50_A7EA36 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 405
Score = 34.3 bits (75), Expect = 3.3
Identities = 15/47 (31%), Positives = 29/47 (61%)
Frame = +3
Query: 108 LELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLF 248
L+++SG GG+ ++ES + G I+++T A K NFP+ +++
Sbjct: 268 LDIFSGAGGLSQGFHESGVVG-TKYVIELDTAAAKTLKRNFPDAIVY 313
>UniRef50_Q81XV4 Cluster: Prophage LambdaBa01, C-5 cytosine-specific
DNA methylase family protein; n=2; Bacillus cereus
group|Rep: Prophage LambdaBa01, C-5 cytosine-specific
DNA methylase family protein - Bacillus anthracis
Length = 259
Score = 33.9 bits (74), Expect = 4.4
Identities = 40/170 (23%), Positives = 70/170 (41%), Gaps = 4/170 (2%)
Frame = +3
Query: 102 RILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNI----QSL 269
++L+L SGI G+ A + + I A +I V + N+P +F QSL
Sbjct: 10 KMLDLCSGIAGISMAADWAGID--TAAFCEIEEFNQKVLRKNYPNIPIFPDLYKLMKQSL 67
Query: 270 TPIEIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENV 449
++ I + PCQ + GK D R + ++ +L ++ ENV
Sbjct: 68 IDGGVDVDSIGVISAGYPCQGESLVGKRRGAEDERW-LWPEVFRLIKELRPTWFV-GENV 125
Query: 450 KGFECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIAKRNN 599
G + + + L + + F+ VSVG P+ R R + + N+
Sbjct: 126 AGHVTMGLDTVLSD-LEEENYSTRTFVFPAVSVGAPHQRYRTFIVGHSND 174
>UniRef50_A3VWG7 Cluster: Cytosine-specific methyltransferase; n=1;
Roseovarius sp. 217|Rep: Cytosine-specific
methyltransferase - Roseovarius sp. 217
Length = 387
Score = 33.9 bits (74), Expect = 4.4
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +3
Query: 297 IDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKGFECSTVR 476
+D V PPCQPF+ G++ D R + F I + +L +I ENVKG S+
Sbjct: 72 VDLVTGGPPCQPFSMGGRHRAFLDGR-DMFPQAIRAVRELRPRAFI-FENVKGLTRSSFA 129
Query: 477 N 479
N
Sbjct: 130 N 130
>UniRef50_A1ZIH7 Cluster: Cytosine-specific methyltransferase; n=6;
Microscilla marina ATCC 23134|Rep: Cytosine-specific
methyltransferase - Microscilla marina ATCC 23134
Length = 391
Score = 33.9 bits (74), Expect = 4.4
Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Frame = +3
Query: 102 RILELYSGIGGMHCAWNESTIKGKV-VAAIDINTVANDVYKYNFPETLLFTKNIQSLTPI 278
R L+SG+GG A G V V ++ N + ++ +P+T + ++I+ T
Sbjct: 2 RHASLFSGMGGFDLAAERM---GWVNVFTVENNPFCQTILRHYWPDTTHY-EDIRQ-TDF 56
Query: 279 EIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQ--YILMENVK 452
+ID + PCQPF++ GK ND R +L+ ++L + ++ ++L ENV
Sbjct: 57 TPHYGQIDLLTGGFPCQPFSQAGKRKGINDKR---YLW-PEMLRAIREIRPTWVLGENVA 112
Query: 453 G 455
G
Sbjct: 113 G 113
>UniRef50_A2Y1R5 Cluster: Cytosine-specific methyltransferase; n=5;
Oryza sativa|Rep: Cytosine-specific methyltransferase -
Oryza sativa subsp. indica (Rice)
Length = 1407
Score = 33.9 bits (74), Expect = 4.4
Identities = 25/113 (22%), Positives = 50/113 (44%), Gaps = 7/113 (6%)
Frame = +3
Query: 267 LTPIEIEKYKIDTVLMSPPCQPFTRNGKNLDENDP----RTNSFLYFIDILDKLNTLQYI 434
L P + +D V PPCQ + +N + P + + F+D++ L +Y+
Sbjct: 1010 LRPSKFPLGDVDVVCGGPPCQGISGYNRNREFEAPFKCEKNKQIIVFMDVVQFLKP-KYV 1068
Query: 435 LMENVKG---FECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCI 584
MENV F +T+ + +L + + +++ G+P R+R + +
Sbjct: 1069 YMENVLDILKFADATLARYALSRLVAMHYQARLGIMAAGCYGLPQFRMRVFLL 1121
>UniRef50_Q0CCX0 Cluster: Predicted protein; n=1; Aspergillus
terreus NIH2624|Rep: Predicted protein - Aspergillus
terreus (strain NIH 2624)
Length = 160
Score = 33.9 bits (74), Expect = 4.4
Identities = 18/76 (23%), Positives = 34/76 (44%)
Frame = +3
Query: 111 ELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIEIEK 290
+ + G GG C ++ + + A+D + A + +FP T + + +
Sbjct: 66 DAFCGAGGGSCGARKAGVHNEW--AVDFSNHALETDGRHFPTTDWWQAEVNRFRSLNYNY 123
Query: 291 YKIDTVLMSPPCQPFT 338
++D + SPPCQP T
Sbjct: 124 LRVDILHRSPPCQPST 139
>UniRef50_A7E505 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 789
Score = 33.9 bits (74), Expect = 4.4
Identities = 40/179 (22%), Positives = 69/179 (38%), Gaps = 5/179 (2%)
Frame = +3
Query: 66 NVSSTMEEKMEHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFP--ET 239
NV + ++ + Y G GGM + +K K D+N A ++ NFP E
Sbjct: 462 NVDNPSSSSSKYTYGDGYCGAGGMTVGAAAAGLKVKW--GFDLNPHAGLTWQNNFPLAEF 519
Query: 240 LLFTKNIQSLTPIEIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLN 419
L N + P + +D + +SPPCQ F+ ND + L+ + +
Sbjct: 520 HLLPVNEFAALPDPRKNLWVDILHLSPPCQVFSPAHTVPGRNDEMNYASLFGVRCAIEKA 579
Query: 420 TLQYILMENVKGF---ECSTVRNLFVEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIA 587
+ + +E G + N V T G+ ++ G+P+ R R +A
Sbjct: 580 RPRIVTLEQTFGILHPQNKDAFNGLVTCFTDLGYNVSWQVVEFQGYGLPSKRKRLIILA 638
>UniRef50_UPI000023E2A8 Cluster: hypothetical protein FG08648.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG08648.1 - Gibberella zeae PH-1
Length = 602
Score = 33.5 bits (73), Expect = 5.8
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 171 KVVAAIDINTVANDVYKYNFPETLLFTKNI-QSLTPIEIEKYKIDTVLMSPPCQPFT 338
K+ AID + Y+ NFP+T LF + + + + ++D + SPPCQ F+
Sbjct: 276 KIQYAIDKAPEVWETYETNFPDTELFRMPLDEFIAEPNVGHKRVDILHFSPPCQFFS 332
>UniRef50_Q7P2L5 Cluster: Hypothetical Exported Protein; n=3;
Fusobacterium nucleatum|Rep: Hypothetical Exported
Protein - Fusobacterium nucleatum subsp. vincentii ATCC
49256
Length = 317
Score = 33.5 bits (73), Expect = 5.8
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 555 PNSRLRYYCIAKRNNTWNFKRKDELITCLPKTFAKPHC 668
PN +++YY + + +FK KD +ITC K C
Sbjct: 229 PNGKIQYYVVVAGDEIKDFKVKDRIITCYDNGKVKQDC 266
>UniRef50_A6V4A0 Cluster: Modification methylase DdeI; n=1;
Pseudomonas aeruginosa PA7|Rep: Modification methylase
DdeI - Pseudomonas aeruginosa PA7
Length = 518
Score = 33.5 bits (73), Expect = 5.8
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +3
Query: 294 KIDTVLMSPPCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENVKGFE 461
KI + PPCQ F+ G+ E DPR F +++++ + +L ENV G +
Sbjct: 156 KIQVLAGGPPCQGFSFAGRR-QEADPRNKLFEKYVEMVRAIQPAALVL-ENVPGMK 209
>UniRef50_A7QR08 Cluster: Chromosome undetermined scaffold_147, whole
genome shotgun sequence; n=4; Vitis vinifera|Rep:
Chromosome undetermined scaffold_147, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 1447
Score = 33.5 bits (73), Expect = 5.8
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +3
Query: 108 LELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIEIE 287
L++++G GG+ +S AI+ A D +K N PE+ +F N + +E
Sbjct: 1016 LDIFAGCGGLSEGLQQSGSVSVTKWAIEYEEPAGDAFKLNHPESSMFINNCNVILRAVME 1075
Query: 288 K 290
K
Sbjct: 1076 K 1076
>UniRef50_Q73L96 Cluster: Sigma-54 dependent transcriptional
regulator/response regulator; n=6; Spirochaetaceae|Rep:
Sigma-54 dependent transcriptional regulator/response
regulator - Treponema denticola
Length = 473
Score = 33.1 bits (72), Expect = 7.7
Identities = 24/99 (24%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Frame = +3
Query: 159 TIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIEIEKYKIDT-VLMSPPCQPF 335
++ +++AA + + V ++ K NF E L F N+ + + + K D +L++ + F
Sbjct: 274 SVDTRIIAATNRDLV-EEIKKGNFREDLYFRLNVVHIHVPPLRERKEDIPLLVAAFIKDF 332
Query: 336 TR-NGKNLDENDPRTNSFLYFIDILDKLNTLQYILMENV 449
NGK +D +PR + +Y + + LQ + V
Sbjct: 333 AEENGKKIDSMEPRARAAIYNYEWPGNIRQLQNCIQSAV 371
>UniRef50_O24895 Cluster: Cytosine-specific methyltransferase; n=5;
Proteobacteria|Rep: Cytosine-specific methyltransferase
- Helicobacter pylori (Campylobacter pylori)
Length = 823
Score = 33.1 bits (72), Expect = 7.7
Identities = 22/92 (23%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Frame = +3
Query: 186 IDINTVANDVYKYNFPETLLFTKNIQSLTPIEIEKYKIDTVLMSPPCQPFT-RNGKNLDE 362
+D + ++ D+ K E +L K I+ + + ++D V+ +PPCQ + N K ++
Sbjct: 52 LDESYISGDIKKPETKEKIL--KQIEFYSK-KFGNDRVDLVVATPPCQGMSVANHKKKND 108
Query: 363 NDPRTNSFLYFIDILDKLNTLQYILMENVKGF 458
R + + ID++ ++ ++ ++ENV F
Sbjct: 109 EIKRNSLVVESIDLIKQIKP-RFFILENVPSF 139
>UniRef50_Q1GFZ2 Cluster: Prophage LambdaSo; type II DNA
modification methyltransferase; putative; n=1;
Silicibacter sp. TM1040|Rep: Prophage LambdaSo; type II
DNA modification methyltransferase; putative -
Silicibacter sp. (strain TM1040)
Length = 697
Score = 33.1 bits (72), Expect = 7.7
Identities = 32/124 (25%), Positives = 62/124 (50%), Gaps = 6/124 (4%)
Frame = +3
Query: 105 ILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIE- 281
I++ ++G GG E + AI+ + A +++ N PE L ++N+ + P+E
Sbjct: 21 IVDSFAGGGGASTGI-ELALDRSPDIAINHDPAALALHEANHPEALHLSENVYRIDPLEH 79
Query: 282 IEKYKIDTVLMSPPCQPFT--RNGKNLDENDPRTNSFLY--FIDILDKL-NTLQYILMEN 446
+ I + SP C+ F+ + GK + N R +++ +I+ + K + +LMEN
Sbjct: 80 LSGKHIGLMWFSPDCKHFSKAKGGKPVARN-IRDLAWIIPGWIERIQKSGGKVDVVLMEN 138
Query: 447 VKGF 458
V+ F
Sbjct: 139 VEEF 142
>UniRef50_A6Q436 Cluster: Putative uncharacterized protein; n=1;
Nitratiruptor sp. SB155-2|Rep: Putative uncharacterized
protein - Nitratiruptor sp. (strain SB155-2)
Length = 387
Score = 33.1 bits (72), Expect = 7.7
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Frame = +3
Query: 90 KMEHRILELYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQS- 266
K + R+L+ +S GG ++ KG V +DI++ A + K NF + K +++
Sbjct: 211 KQKERMLDCFSNSGGF--GLYAASKKGADVEIVDISSQALALAKSNFRLNGVVGKFVEAN 268
Query: 267 ----LTPIEIEKYKIDTVLMSPPCQPFTRNGK 350
L + +K K DTV++ PP +R+ K
Sbjct: 269 VFDYLRELRKKKAKFDTVVLDPPSFAKSRHQK 300
>UniRef50_A5N2E9 Cluster: Phage-related protein; n=1; Clostridium
kluyveri DSM 555|Rep: Phage-related protein -
Clostridium kluyveri DSM 555
Length = 302
Score = 33.1 bits (72), Expect = 7.7
Identities = 41/166 (24%), Positives = 72/166 (43%), Gaps = 8/166 (4%)
Frame = +3
Query: 114 LYSGIGGMHCAWNESTIKGKVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIEIEKY 293
L++GIGG+ A + K V + V + ++P+ + K+++S+T + +
Sbjct: 19 LFTGIGGIDLAAEWAGFK--TVGQCEFADYPTRVLEKHWPDVERW-KDVRSITVESVRER 75
Query: 294 KID--TVLMSP-PCQPFTRNGKNLDENDPRTNSFLYFIDILDKLNTL--QYILMENVKGF 458
I TVL + PCQP + G+ ND R + + +++ L ++ L ENV G
Sbjct: 76 GIQEVTVLSAGFPCQPHSVAGERKASNDERD----LWPETAERIRILKPRWFLGENVPGI 131
Query: 459 ECSTVRNLF---VEKLTYCGFVYQEFMLSPVSVGVPNSRLRYYCIA 587
S F + L G+ VG P+ R R + +A
Sbjct: 132 LSSENGRFFGGILRDLAKMGYSVGWCCYGANRVGAPHKRERIFIVA 177
>UniRef50_Q6FLD9 Cluster: Similar to sp|P53917 Saccharomyces
cerevisiae YNL127w; n=1; Candida glabrata|Rep: Similar
to sp|P53917 Saccharomyces cerevisiae YNL127w - Candida
glabrata (Yeast) (Torulopsis glabrata)
Length = 932
Score = 33.1 bits (72), Expect = 7.7
Identities = 19/65 (29%), Positives = 34/65 (52%)
Frame = +3
Query: 210 DVYKYNFPETLLFTKNIQSLTPIEIEKYKIDTVLMSPPCQPFTRNGKNLDENDPRTNSFL 389
D+YKY+ + KN +++P++ E + D V P C+ T NL + ++NS
Sbjct: 435 DLYKYHGLRKIENRKNKWTISPLQYEAFTSDIVTRYPSCKLPT---TNLPKEFDKSNSLS 491
Query: 390 YFIDI 404
F++I
Sbjct: 492 QFLEI 496
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 733,082,053
Number of Sequences: 1657284
Number of extensions: 14914532
Number of successful extensions: 37425
Number of sequences better than 10.0: 250
Number of HSP's better than 10.0 without gapping: 35915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37320
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62969581935
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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