Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9b03
         (759 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    24   1.5  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   3.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.5  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   6.1  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +1

Query: 442 KMLKGLNVLLFEIYLLKS*LTVD 510
           K +K L +LLFE  LL S  T+D
Sbjct: 646 KAVKDLVILLFETALLSSGFTLD 668


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = -1

Query: 360 HPNFFHCE*KAGKVVT*ELCQFYTFLFLSVLKIVYFW 250
           HP +F    +   + T + C F    +LSV  I+ ++
Sbjct: 303 HPTYFGKTGRKTVLKTNKYCNFIILFYLSVFVILVYY 339


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
 Frame = -2

Query: 305 CVNFIL---FYFYRC*RLYIFGE**CLRKVVLVNVICDGVYIYSGYNFPFDCAFIPGTMH 135
           CV  IL   +YFY     Y F     L  V L+ ++C  +Y +   +  F CAFI  TMH
Sbjct: 230 CVLIILLCIYYFY-----YAF----ILFTVHLLLLVC--IYYFYYMHLLFCCAFIIFTMH 278


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = -2

Query: 167 FDCAFIPGTMHATNTAVKF*YSVFHFFLH 81
           F  + I   ++ T +AV   ++++H F+H
Sbjct: 36  FKLSKIRSFLNITASAVLLPFAIYHIFMH 64


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,577
Number of Sequences: 336
Number of extensions: 4526
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)