Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9b03
         (759 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    27   0.14 
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    27   0.19 
DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    27   0.19 
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    27   0.19 
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    27   0.19 
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    27   0.19 
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   2.4  
S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating...    23   4.1  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    23   4.1  
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    22   5.4  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    22   5.4  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   9.5  
AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    21   9.5  
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    21   9.5  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    21   9.5  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   9.5  

>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 27.5 bits (58), Expect = 0.14
 Identities = 10/29 (34%), Positives = 20/29 (68%)
 Frame = +3

Query: 144 AWNESTIKGKVVAAIDINTVANDVYKYNF 230
           A  E + + K+++++  NT+ N+ YKYN+
Sbjct: 70  AERERSREPKIISSLSNNTIHNNNYKYNY 98


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 27.1 bits (57), Expect = 0.19
 Identities = 9/26 (34%), Positives = 19/26 (73%)
 Frame = +3

Query: 153 ESTIKGKVVAAIDINTVANDVYKYNF 230
           E + + K+++++  NT+ N+ YKYN+
Sbjct: 73  ERSREPKIISSLSNNTIHNNNYKYNY 98


>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 27.1 bits (57), Expect = 0.19
 Identities = 9/26 (34%), Positives = 19/26 (73%)
 Frame = +3

Query: 153 ESTIKGKVVAAIDINTVANDVYKYNF 230
           E + + K+++++  NT+ N+ YKYN+
Sbjct: 74  ERSREPKIISSLSNNTIHNNNYKYNY 99


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 27.1 bits (57), Expect = 0.19
 Identities = 9/26 (34%), Positives = 19/26 (73%)
 Frame = +3

Query: 153 ESTIKGKVVAAIDINTVANDVYKYNF 230
           E + + K+++++  NT+ N+ YKYN+
Sbjct: 74  ERSREPKIISSLSNNTIHNNNYKYNY 99


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 27.1 bits (57), Expect = 0.19
 Identities = 9/26 (34%), Positives = 19/26 (73%)
 Frame = +3

Query: 153 ESTIKGKVVAAIDINTVANDVYKYNF 230
           E + + K+++++  NT+ N+ YKYN+
Sbjct: 74  ERSREPKIISSLSNNTIHNNNYKYNY 99


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 27.1 bits (57), Expect = 0.19
 Identities = 9/26 (34%), Positives = 19/26 (73%)
 Frame = +3

Query: 153 ESTIKGKVVAAIDINTVANDVYKYNF 230
           E + + K+++++  NT+ N+ YKYN+
Sbjct: 74  ERSREPKIISSLSNNTIHNNNYKYNY 99


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 330 PFTRNGKNLDENDP 371
           PF R  +NLDEN P
Sbjct: 554 PFERTFRNLDENRP 567


>S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating
           peptide protein.
          Length = 50

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -1

Query: 291 TFLFLSVLKIVYFW*IIVSQESCTCK 214
           TF FLSV+ I  ++        C CK
Sbjct: 8   TFFFLSVILITSYFVTPTMSIKCNCK 33


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 126 IGGMHCAWNESTIKGKVVAAIDIN 197
           IGG++  W E  I G  ++ I +N
Sbjct: 246 IGGLNFQWGEEGIFGMSLSPIAVN 269


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 631 ISSSFLLKFHVLFLLAIQ 578
           +S S L+  HV FLL ++
Sbjct: 278 LSISILISLHVFFLLVVE 295


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 631 ISSSFLLKFHVLFLLAIQ 578
           +S S L+  HV FLL ++
Sbjct: 278 LSISILISLHVFFLLVVE 295


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -2

Query: 194 YIYSGYNFPFDCAFIPGTMHATNTA 120
           Y   G +FPF+ AFI      +N++
Sbjct: 297 YYDYGADFPFNFAFIKNVSRDSNSS 321


>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 126 YRCKVLIFCVPFF 88
           Y C+ L+  VPFF
Sbjct: 445 YNCRSLVASVPFF 457


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 126 YRCKVLIFCVPFF 88
           Y C+ L+  VPFF
Sbjct: 413 YNCRSLVASVPFF 425


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -3

Query: 652 KVFGRHVISSSFLLKFHVLFL 590
           K FG++  S+SF+L  + +FL
Sbjct: 5   KYFGKNFPSTSFILINYFIFL 25


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -2

Query: 194 YIYSGYNFPFDCAFIPGTMHATNTA 120
           Y   G +FPF+ AFI      +N++
Sbjct: 297 YYDYGADFPFNFAFIKNVSRDSNSS 321


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,932
Number of Sequences: 438
Number of extensions: 4579
Number of successful extensions: 26
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23875740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)