Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9a19
(664 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P06576 Cluster: ATP synthase subunit beta, mitochondria... 120 3e-26
UniRef50_P00830 Cluster: ATP synthase subunit beta, mitochondria... 119 5e-26
UniRef50_Q9C5A9 Cluster: ATP synthase subunit beta-3, mitochondr... 116 7e-25
UniRef50_Q5FRC5 Cluster: ATP synthase subunit beta; n=266; cellu... 114 2e-24
UniRef50_Q5NQY9 Cluster: ATP synthase subunit beta; n=169; cellu... 112 8e-24
UniRef50_Q92LK8 Cluster: ATP synthase subunit beta; n=32; cellul... 106 4e-22
UniRef50_O50341 Cluster: ATP synthase subunit beta; n=23; cellul... 106 5e-22
UniRef50_A1ZPD5 Cluster: ATP synthase F1, beta subunit; n=4; Bac... 101 2e-20
UniRef50_P13356 Cluster: ATP synthase subunit beta; n=5; Bactero... 99 5e-20
UniRef50_Q9MTQ2 Cluster: ATP synthase subunit beta; n=2; Amphidi... 96 8e-19
UniRef50_Q6KIC3 Cluster: ATP synthase beta chain; n=1; Mycoplasm... 83 4e-15
UniRef50_Q98QX4 Cluster: ATP SYNTHASE BETA CHAIN; n=1; Mycoplasm... 83 6e-15
UniRef50_Q62EB7 Cluster: ATP synthase F1, beta subunit; n=27; Ba... 78 2e-13
UniRef50_Q4IW70 Cluster: ATP synthase F1, beta subunit; n=1; Azo... 77 4e-13
UniRef50_A5IFJ3 Cluster: ATP synthase F1, beta chain; n=3; Legio... 73 5e-12
UniRef50_Q98PM3 Cluster: ATP SYNTHASE BETA CHAIN; n=9; Mycoplasm... 70 4e-11
UniRef50_Q98QB6 Cluster: ATP synthase subunit beta 2; n=5; Mycop... 62 2e-08
UniRef50_O54249 Cluster: Flagellum-specific ATP synthase; n=8; A... 42 0.010
UniRef50_O07025 Cluster: Flagellum-specific ATP synthase; n=24; ... 42 0.018
UniRef50_Q52371 Cluster: Type III secretion ATP synthase hrcN; n... 40 0.053
UniRef50_A0Z379 Cluster: ATPase FliI/YscN; n=1; marine gamma pro... 40 0.071
UniRef50_O83417 Cluster: Flagellum-specific ATP synthase; n=42; ... 39 0.093
UniRef50_Q2I6N8 Cluster: ATP synthase beta chain; n=2; Gonyaulax... 39 0.12
UniRef50_Q4PJ51 Cluster: Predicted F0F1-type ATP synthase beta s... 38 0.22
UniRef50_A4HP93 Cluster: Putative uncharacterized protein; n=2; ... 36 1.1
UniRef50_Q2CGJ3 Cluster: Flagellum-specific ATP synthase; n=1; O... 35 1.5
UniRef50_A5FHZ4 Cluster: Putative uncharacterized protein precur... 35 1.5
UniRef50_UPI0000EB4335 Cluster: UPI0000EB4335 related cluster; n... 35 2.0
UniRef50_Q9EZ19 Cluster: SpaL/InvC; n=4; Enterobacteriaceae|Rep:... 34 2.7
UniRef50_UPI0000F341A8 Cluster: UPI0000F341A8 related cluster; n... 34 3.5
UniRef50_Q63K04 Cluster: Kumamolisin; n=33; Burkholderia|Rep: Ku... 34 3.5
UniRef50_Q1CVR3 Cluster: Putative uncharacterized protein; n=1; ... 34 3.5
UniRef50_Q67G29 Cluster: Cyclase; n=1; Streptomyces griseoruber|... 33 4.6
UniRef50_Q12T73 Cluster: ATPase FliI/YscN; n=1; Shewanella denit... 33 4.6
UniRef50_O88737 Cluster: Protein bassoon; n=13; Euteleostomi|Rep... 33 4.6
UniRef50_A7HIT8 Cluster: Putative uncharacterized protein; n=2; ... 33 6.1
UniRef50_UPI0000E48CBD Cluster: PREDICTED: hypothetical protein;... 33 8.1
UniRef50_Q3J9F4 Cluster: Sodium-transporting two-sector ATPase; ... 33 8.1
UniRef50_Q2IQ94 Cluster: Sodium-transporting two-sector ATPase; ... 33 8.1
UniRef50_Q02CE4 Cluster: Tannase and feruloyl esterase precursor... 33 8.1
UniRef50_A7RXQ2 Cluster: Predicted protein; n=1; Nematostella ve... 33 8.1
>UniRef50_P06576 Cluster: ATP synthase subunit beta, mitochondrial
precursor; n=3027; cellular organisms|Rep: ATP synthase
subunit beta, mitochondrial precursor - Homo sapiens
(Human)
Length = 529
Score = 120 bits (289), Expect = 3e-26
Identities = 67/113 (59%), Positives = 81/113 (71%), Gaps = 14/113 (12%)
Frame = +3
Query: 366 LDRVTLAEHFRDEEGQDLLLFIDNIFRFTQAGSEV-----RTRSSYQFEGRGGR------ 512
L +T+AE+FRD+EGQD+LLFIDNIFRFTQAGSEV R S+ ++
Sbjct: 284 LTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQ 343
Query: 513 ---FTVKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYP 662
T K ++++A+YVPADDLTDPAPATTFAHLDATTVLS AIAELG+YP
Sbjct: 344 ERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYP 396
Score = 39.1 bits (87), Expect = 0.093
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +1
Query: 304 TRASLVYGQKDEPHGARARVALTG 375
++ +LVYGQ +EP GARARVALTG
Sbjct: 263 SKVALVYGQMNEPPGARARVALTG 286
>UniRef50_P00830 Cluster: ATP synthase subunit beta, mitochondrial
precursor; n=14; cellular organisms|Rep: ATP synthase
subunit beta, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 511
Score = 119 bits (287), Expect = 5e-26
Identities = 67/113 (59%), Positives = 80/113 (70%), Gaps = 14/113 (12%)
Frame = +3
Query: 366 LDRVTLAEHFRDEEGQDLLLFIDNIFRFTQAGSEV-----RTRSSYQFEGRGGR------ 512
L +T+AE+FRDEEGQD+LLFIDNIFRFTQAGSEV R S+ ++
Sbjct: 267 LTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQ 326
Query: 513 ---FTVKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYP 662
T K ++++AVYVPADDLTDPAPATTFAHLDATTVLS I+ELG+YP
Sbjct: 327 ERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYP 379
Score = 39.9 bits (89), Expect = 0.053
Identities = 18/27 (66%), Positives = 23/27 (85%)
Frame = +1
Query: 295 ELETRASLVYGQKDEPHGARARVALTG 375
E E++ +LV+GQ +EP GARARVALTG
Sbjct: 243 EGESKVALVFGQMNEPPGARARVALTG 269
>UniRef50_Q9C5A9 Cluster: ATP synthase subunit beta-3, mitochondrial
precursor; n=1793; root|Rep: ATP synthase subunit
beta-3, mitochondrial precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 559
Score = 116 bits (278), Expect = 7e-25
Identities = 65/114 (57%), Positives = 79/114 (69%), Gaps = 14/114 (12%)
Frame = +3
Query: 363 GLDRVTLAEHFRDEEGQDLLLFIDNIFRFTQAGSEV-----RTRSSYQFEGRGGR----- 512
GL +T+AE+FRD EGQD+LLFIDNIFRFTQA SEV R S+ ++
Sbjct: 313 GLTGLTVAEYFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLASDLGAL 372
Query: 513 ----FTVKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYP 662
T K ++++A+YVPADDLTDPAPATTFAHLDATTVLS I+ELG+YP
Sbjct: 373 QERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRQISELGIYP 426
Score = 40.7 bits (91), Expect = 0.031
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = +1
Query: 289 EYELETRASLVYGQKDEPHGARARVALTG 375
E + E++ +LVYGQ +EP GARARV LTG
Sbjct: 288 EKQSESKCALVYGQMNEPPGARARVGLTG 316
>UniRef50_Q5FRC5 Cluster: ATP synthase subunit beta; n=266; cellular
organisms|Rep: ATP synthase subunit beta - Gluconobacter
oxydans (Gluconobacter suboxydans)
Length = 487
Score = 114 bits (274), Expect = 2e-24
Identities = 65/113 (57%), Positives = 81/113 (71%), Gaps = 14/113 (12%)
Frame = +3
Query: 366 LDRVTLAEHFRDEEGQDLLLFIDNIFRFTQAGSEV-----RTRSSYQFEGR-----GG-- 509
L ++LAE+FRDEEGQD+L F+DNIFRFTQAGSEV R S+ ++ G
Sbjct: 244 LTGLSLAEYFRDEEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGALQ 303
Query: 510 -RFT-VKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYP 662
R T K ++++AVYVPADDLTDPAPA TFAHLDATTVL+ +IAE+G+YP
Sbjct: 304 ERITSTKKGSITSVQAVYVPADDLTDPAPAATFAHLDATTVLNRSIAEMGIYP 356
Score = 37.9 bits (84), Expect = 0.22
Identities = 16/24 (66%), Positives = 21/24 (87%)
Frame = +1
Query: 304 TRASLVYGQKDEPHGARARVALTG 375
++ +LVYGQ +EP GAR+RVALTG
Sbjct: 223 SKVALVYGQMNEPPGARSRVALTG 246
>UniRef50_Q5NQY9 Cluster: ATP synthase subunit beta; n=169; cellular
organisms|Rep: ATP synthase subunit beta - Zymomonas
mobilis
Length = 484
Score = 112 bits (269), Expect = 8e-24
Identities = 62/113 (54%), Positives = 82/113 (72%), Gaps = 14/113 (12%)
Frame = +3
Query: 366 LDRVTLAEHFRDEEGQDLLLFIDNIFRFTQAGSEV-----RTRSSYQFE-------GR-G 506
L +T+AE+FRD+EGQD+L F+DNIFRFTQAG+EV R S+ ++ G+
Sbjct: 240 LSGLTMAEYFRDQEGQDVLFFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGQLQ 299
Query: 507 GRFT-VKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYP 662
R T K ++++A+YVPADDLTDPAPA +FAHLDATTVLS AI+E+G+YP
Sbjct: 300 ERITSTKKGSITSVQAIYVPADDLTDPAPAASFAHLDATTVLSRAISEMGIYP 352
Score = 37.5 bits (83), Expect = 0.28
Identities = 16/24 (66%), Positives = 21/24 (87%)
Frame = +1
Query: 304 TRASLVYGQKDEPHGARARVALTG 375
++ +LVYGQ +EP GARARVAL+G
Sbjct: 219 SKVALVYGQMNEPPGARARVALSG 242
>UniRef50_Q92LK8 Cluster: ATP synthase subunit beta; n=32; cellular
organisms|Rep: ATP synthase subunit beta - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 504
Score = 106 bits (255), Expect = 4e-22
Identities = 61/113 (53%), Positives = 80/113 (70%), Gaps = 14/113 (12%)
Frame = +3
Query: 366 LDRVTLAEHFRDEEGQDLLLFIDNIFRFTQAGSEV-----RTRSSYQFEGR----GGRFT 518
L +T+AE FRDE GQD+L F+DNIFRFTQAGSEV R S+ ++ G+
Sbjct: 261 LTGLTVAEQFRDE-GQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQMQ 319
Query: 519 VKLSLRS-----NLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYP 662
+++ + +++A+YVPADDLTDPAPAT+FAHLDATTVLS +IAE G+YP
Sbjct: 320 ERITTTTKGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYP 372
Score = 40.7 bits (91), Expect = 0.031
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = +1
Query: 304 TRASLVYGQKDEPHGARARVALTG 375
++A+LVYGQ +EP GARARVALTG
Sbjct: 240 SKAALVYGQMNEPPGARARVALTG 263
>UniRef50_O50341 Cluster: ATP synthase subunit beta; n=23; cellular
organisms|Rep: ATP synthase subunit beta -
Fervidobacterium islandicum
Length = 472
Score = 106 bits (254), Expect = 5e-22
Identities = 69/149 (46%), Positives = 87/149 (58%), Gaps = 14/149 (9%)
Frame = +3
Query: 258 NQEFLEVIFAGVRAGDPGVPGIRPEG*APRGACPGGLDRVTLAEHFRDEEGQDLLLFIDN 437
N +LE+ AGV V G E P L +T+AE+FRD EG+D+LLFIDN
Sbjct: 193 NDLYLEMTEAGVLNNTVLVFGQMNE--PPGARFRVALTALTIAEYFRDVEGRDVLLFIDN 250
Query: 438 IFRFTQAGSEVR--------------TRSSYQFEGRGGRFTVKLSLRSNLKAVYVPADDL 575
IFRF QAGSEV T S+ E + + K ++++A+YVPADD+
Sbjct: 251 IFRFVQAGSEVSALLGRMPSAVGYQPTLSTDMGELQERITSTKKGSITSVQAIYVPADDI 310
Query: 576 TDPAPATTFAHLDATTVLSPAIAELGVYP 662
TDPAPATTF HLDAT VLS +A LG+YP
Sbjct: 311 TDPAPATTFTHLDATIVLSRQLAALGLYP 339
>UniRef50_A1ZPD5 Cluster: ATP synthase F1, beta subunit; n=4;
Bacteroidetes|Rep: ATP synthase F1, beta subunit -
Microscilla marina ATCC 23134
Length = 505
Score = 101 bits (242), Expect = 2e-20
Identities = 61/117 (52%), Positives = 77/117 (65%), Gaps = 18/117 (15%)
Frame = +3
Query: 366 LDRVTLAEHFRDEEG----QDLLLFIDNIFRFTQAGSEV-----RTRSSYQFEGRGG--- 509
L +++AE+FRD +G D+L FIDNIFRFTQAGSEV R S+ ++
Sbjct: 253 LSGLSIAEYFRDGDGTGKGNDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEM 312
Query: 510 -----RFT-VKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYP 662
R T K ++++A+YVPADDLTDPAPATTFAHLDATTVLS +A LG+YP
Sbjct: 313 GVMQERITSTKRGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRKLASLGIYP 369
Score = 37.9 bits (84), Expect = 0.22
Identities = 16/25 (64%), Positives = 22/25 (88%)
Frame = +1
Query: 301 ETRASLVYGQKDEPHGARARVALTG 375
E++A+ V+GQ +EP GARARVAL+G
Sbjct: 231 ESKATFVFGQMNEPPGARARVALSG 255
>UniRef50_P13356 Cluster: ATP synthase subunit beta; n=5;
Bacteroides|Rep: ATP synthase subunit beta - Bacteroides
fragilis
Length = 505
Score = 99 bits (238), Expect = 5e-20
Identities = 62/117 (52%), Positives = 74/117 (63%), Gaps = 18/117 (15%)
Frame = +3
Query: 366 LDRVTLAEHFRD----EEGQDLLLFIDNIFRFTQAGSEV-----RTRSSYQFE------- 497
L +T+AE FRD +D+L FIDNIFRFTQAGSEV R S+ ++
Sbjct: 256 LSGLTVAESFRDMGAKSGARDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEM 315
Query: 498 -GRGGRFT-VKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYP 662
R T K ++++AVYVPADDLTDPAPATTF HLDATTVLS I ELG+YP
Sbjct: 316 GAMQERITSTKTGSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYP 372
Score = 35.1 bits (77), Expect = 1.5
Identities = 15/25 (60%), Positives = 22/25 (88%)
Frame = +1
Query: 301 ETRASLVYGQKDEPHGARARVALTG 375
+++A+LV+GQ +EP GARA VAL+G
Sbjct: 234 KSQATLVFGQMNEPPGARASVALSG 258
>UniRef50_Q9MTQ2 Cluster: ATP synthase subunit beta; n=2;
Amphidinium|Rep: ATP synthase subunit beta - Amphidinium
operculatum (Dinoflagellate)
Length = 548
Score = 95.9 bits (228), Expect = 8e-19
Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 14/110 (12%)
Frame = +3
Query: 375 VTLAEHFRDEEGQDLLLFIDNIFRFTQAGSEVRTRSSYQFEGRGGRFTVKLSLRS----- 539
+T+AE+FRD GQDLL+F+DNIFRF QAGSE+ T G + T+ + +
Sbjct: 320 LTMAEYFRDVNGQDLLVFMDNIFRFVQAGSELSTLLGRMPSAVGYQPTLATEMGTLQERI 379
Query: 540 ---------NLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYP 662
+++AVYVPADD+TDPAP F HLDA TVLS +A G+YP
Sbjct: 380 VPTLFGSITSIQAVYVPADDITDPAPVAIFTHLDAITVLSRGLAAKGIYP 429
>UniRef50_Q6KIC3 Cluster: ATP synthase beta chain; n=1; Mycoplasma
mobile|Rep: ATP synthase beta chain - Mycoplasma mobile
Length = 784
Score = 83.4 bits (197), Expect = 4e-15
Identities = 45/114 (39%), Positives = 71/114 (62%), Gaps = 14/114 (12%)
Frame = +3
Query: 363 GLDRVTLAEHFRDEEGQDLLLFIDNIFRFTQAGSEV-----RTRSSYQFE----GRGGRF 515
G+ V +AE+FR+ G+ +LLF+DNIFR+ QAGSE+ +T S+ ++ G+
Sbjct: 523 GISGVKVAEYFRNNLGKSVLLFMDNIFRYVQAGSEISSLLEKTPSAVGYQPTLFSEMGQL 582
Query: 516 TVKLSLR-----SNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYP 662
+++ ++++A+Y+PADD TDPA FAH D+T +LS +A GVYP
Sbjct: 583 QERINSTKDGDITSIQAMYIPADDFTDPAAVAAFAHFDSTIILSRQLAAEGVYP 636
>UniRef50_Q98QX4 Cluster: ATP SYNTHASE BETA CHAIN; n=1; Mycoplasma
pulmonis|Rep: ATP SYNTHASE BETA CHAIN - Mycoplasma
pulmonis
Length = 698
Score = 83.0 bits (196), Expect = 6e-15
Identities = 46/114 (40%), Positives = 71/114 (62%), Gaps = 14/114 (12%)
Frame = +3
Query: 363 GLDRVTLAEHFRDEEGQDLLLFIDNIFRFTQAGSEV-----RTRSSYQFE----GRGGRF 515
G V +AE+FR+ G+++LLF+DNIFR+ QAGSEV +T S+ ++ G+
Sbjct: 435 GFTGVKVAEYFRNNLGKNVLLFMDNIFRYMQAGSEVSSLLEKTPSAVGYQPMLVSEIGKL 494
Query: 516 TVKLSLR-----SNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYP 662
+++ ++++A+Y+PADD TDPA FAH DAT +LS +A G+YP
Sbjct: 495 QERINSNNDGDITSIQAMYIPADDFTDPAAVAAFAHFDATIILSRQLAAEGLYP 548
>UniRef50_Q62EB7 Cluster: ATP synthase F1, beta subunit; n=27;
Bacteria|Rep: ATP synthase F1, beta subunit -
Burkholderia mallei (Pseudomonas mallei)
Length = 534
Score = 77.8 bits (183), Expect = 2e-13
Identities = 48/113 (42%), Positives = 67/113 (59%), Gaps = 14/113 (12%)
Frame = +3
Query: 366 LDRVTLAEHFRDEEGQDLLLFIDNIFRFTQAGSEVR-------TRSSYQ------FEGRG 506
L + +AE+FRDE Q++LL +DN+FRF QAG+EV +R YQ
Sbjct: 257 LTALAIAEYFRDERAQNVLLLMDNVFRFVQAGAEVSGLLGRLPSRVGYQPTLASEVAALQ 316
Query: 507 GRF-TVKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYP 662
R +V+ + + ++AVYVPADD TDPA AH+D+ VLS A+A G+YP
Sbjct: 317 ERIASVEGAAVTAIEAVYVPADDFTDPAVTAIAAHVDSMVVLSRAMAAEGMYP 369
>UniRef50_Q4IW70 Cluster: ATP synthase F1, beta subunit; n=1;
Azotobacter vinelandii AvOP|Rep: ATP synthase F1, beta
subunit - Azotobacter vinelandii AvOP
Length = 473
Score = 77.0 bits (181), Expect = 4e-13
Identities = 47/113 (41%), Positives = 65/113 (57%), Gaps = 14/113 (12%)
Frame = +3
Query: 366 LDRVTLAEHFRDEEGQDLLLFIDNIFRFTQAGSEV-----RTRSSYQFEGRGGRFTVKLS 530
L +++AE+FRDE Q++LL +DN+FRF QAG+EV R S ++ L
Sbjct: 227 LTALSIAEYFRDERRQNVLLLMDNVFRFVQAGAEVSGLLGRLPSRVGYQPTLADEVAALQ 286
Query: 531 LR---------SNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYP 662
R + ++AVYVPADD TDPA AH+D+ VLS A+A G+YP
Sbjct: 287 ERIVSVGGVAVTAIEAVYVPADDFTDPAVTALAAHVDSMVVLSRAMAAQGMYP 339
>UniRef50_A5IFJ3 Cluster: ATP synthase F1, beta chain; n=3;
Legionella pneumophila|Rep: ATP synthase F1, beta chain
- Legionella pneumophila (strain Corby)
Length = 474
Score = 73.3 bits (172), Expect = 5e-12
Identities = 45/114 (39%), Positives = 64/114 (56%), Gaps = 14/114 (12%)
Frame = +3
Query: 363 GLDRVTLAEHFRDEEGQDLLLFIDNIFRFTQAGSEV-----RTRSSYQFEGRGGRFTVKL 527
GL +T AE+ RD G ++L +DNI+RF QAGSE+ R +S ++ +L
Sbjct: 240 GLSALTYAEYLRDTLGHEVLFLVDNIYRFVQAGSEISGLLGRMPASVGYQPTLMTEIAEL 299
Query: 528 SLR---------SNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYP 662
R ++++AVYVPADD++DPA HLD+ VLS A A G+YP
Sbjct: 300 EERMTSTAKGAVTSVQAVYVPADDMSDPAVTGIITHLDSIIVLSRAQAGKGIYP 353
>UniRef50_Q98PM3 Cluster: ATP SYNTHASE BETA CHAIN; n=9;
Mycoplasmataceae|Rep: ATP SYNTHASE BETA CHAIN -
Mycoplasma pulmonis
Length = 468
Score = 70.1 bits (164), Expect = 4e-11
Identities = 43/110 (39%), Positives = 63/110 (57%), Gaps = 14/110 (12%)
Frame = +3
Query: 375 VTLAEHFRDEEGQDLLLFIDNIFRFTQAGSEVRTRSSYQFEGRGGRFTV---------KL 527
+T AE+ RD E +++LLFIDNI+RF QA SEV + G + T+ +L
Sbjct: 231 ITAAEYLRDREKENVLLFIDNIYRFVQASSEVSATLGKKPSLGGYQPTLDTEVSFVHDRL 290
Query: 528 SLRSN-----LKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYP 662
L +N + V++P DDLTDP+ + F+HLD++ VLS A +YP
Sbjct: 291 FLNANGSITTFETVFLPMDDLTDPSAVSIFSHLDSSMVLSRDQAAKNIYP 340
>UniRef50_Q98QB6 Cluster: ATP synthase subunit beta 2; n=5;
Mycoplasma|Rep: ATP synthase subunit beta 2 - Mycoplasma
pulmonis
Length = 468
Score = 61.7 bits (143), Expect = 2e-08
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 14/110 (12%)
Frame = +3
Query: 375 VTLAEHFRDEEGQDLLLFIDNIFRFTQAGSEVRTRSSYQFEGRGGRFTVKLSLRS----- 539
+T AE+ RD E +D+L F+DNI+R+ QAG E+ + G + T+ + S
Sbjct: 223 ITAAEYARDSEQKDVLFFVDNIYRYLQAGRELSFSLGKKPSEAGYQATLVSDISSVQERL 282
Query: 540 ---------NLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYP 662
+ + V++P DDL DPA HLD++ VLS I G++P
Sbjct: 283 ANSKHGSITSFQTVFLPMDDLNDPASVAILNHLDSSLVLSREIFAEGLFP 332
>UniRef50_O54249 Cluster: Flagellum-specific ATP synthase; n=8;
Alphaproteobacteria|Rep: Flagellum-specific ATP synthase
- Rhizobium meliloti (Sinorhizobium meliloti)
Length = 467
Score = 42.3 bits (95), Expect = 0.010
Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 16/115 (13%)
Frame = +3
Query: 366 LDRVTLAEHFRDEEGQDLLLFIDNIFRFTQAGSEVRTRSSYQFEGRGGRFTVKLSLRSNL 545
L VT+AEH+RD +G ++LL +D++ RF A EV T + RG +V L L
Sbjct: 248 LTAVTIAEHYRD-KGDNVLLIVDSVTRFAHAIREVATAAGEPPIARGYPASVFTELPRLL 306
Query: 546 K----------------AVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYP 662
+ ++ V D+ DP + LD VL ++AE G YP
Sbjct: 307 ERAGPGAEGAGTITAIISILVDGDNHNDPVADSARGILDGHIVLDRSLAEEGRYP 361
>UniRef50_O07025 Cluster: Flagellum-specific ATP synthase; n=24;
Epsilonproteobacteria|Rep: Flagellum-specific ATP
synthase - Helicobacter pylori (Campylobacter pylori)
Length = 434
Score = 41.5 bits (93), Expect = 0.018
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 16/117 (13%)
Frame = +3
Query: 360 GGLDRVTLAEHFRDEEGQDLLLFIDNIFRFTQAGSEVR-------TRSSY---------Q 491
G +++AE+F+++ G D+L +D++ RF A E+ T Y Q
Sbjct: 230 GAFCAMSVAEYFKNQ-GLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGYPPSALSLLPQ 288
Query: 492 FEGRGGRFTVKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYP 662
R G+ K S+ + +V V DDL+DP T + LD VLS + + G+YP
Sbjct: 289 LMERAGKEENKGSITAFF-SVLVEGDDLSDPIADQTRSILDGHIVLSRELTDYGIYP 344
>UniRef50_Q52371 Cluster: Type III secretion ATP synthase hrcN;
n=18; Pseudomonas|Rep: Type III secretion ATP synthase
hrcN - Pseudomonas syringae pv. syringae
Length = 449
Score = 39.9 bits (89), Expect = 0.053
Identities = 35/109 (32%), Positives = 48/109 (44%), Gaps = 15/109 (13%)
Frame = +3
Query: 381 LAEHFRDEEGQDLLLFIDNIFRFTQAGSEVRTRSSYQFEGRGG----------RFTVKLS 530
+AE FR GQ +LL +D++ RF +A E+ S GRGG R +
Sbjct: 249 IAEAFR-ARGQKVLLLLDSLTRFARAQREIGIASGEPL-GRGGLPPSVYTLLPRLVERAG 306
Query: 531 LRSN-----LKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYP 662
+ N L V + D + DP + LD VLS +AE G YP
Sbjct: 307 MSENGSITALYTVLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYP 355
>UniRef50_A0Z379 Cluster: ATPase FliI/YscN; n=1; marine gamma
proteobacterium HTCC2080|Rep: ATPase FliI/YscN - marine
gamma proteobacterium HTCC2080
Length = 477
Score = 39.5 bits (88), Expect = 0.071
Identities = 36/109 (33%), Positives = 53/109 (48%), Gaps = 15/109 (13%)
Frame = +3
Query: 381 LAEHFRDEEGQDLLLFIDNIFRFTQAGSEVRTRSSYQFEGRGGRFTVKLSLRSNL----- 545
+AE++R +G ++LL +D++ RF QA E+ + RG +V SL NL
Sbjct: 250 IAEYYR-AQGLNVLLLVDSLTRFAQAQREIGLAAGEPPVSRGYTPSV-FSLMPNLIERAG 307
Query: 546 -------KAVYV---PADDLTDPAPATTFAHLDATTVLSPAIAELGVYP 662
AVY DDL DP + A LD VLS +A+ G++P
Sbjct: 308 NLGSGSITAVYTVLTEGDDLQDPIADSARAILDGHVVLSRKMADSGLFP 356
>UniRef50_O83417 Cluster: Flagellum-specific ATP synthase; n=42;
Bacteria|Rep: Flagellum-specific ATP synthase -
Treponema pallidum
Length = 447
Score = 39.1 bits (87), Expect = 0.093
Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 14/122 (11%)
Frame = +3
Query: 339 APRGACPGGLDRVTLAEHFRDEEGQDLLLFIDNIFRFTQAGSEVRTRSSYQFEGRG---G 509
+P G +AE+FRD +G+ +LL D++ RF +A E+ S RG G
Sbjct: 227 SPLARVRGAYTATAIAEYFRD-QGKQVLLLFDSLTRFAKAQREIGLASGELPATRGYTPG 285
Query: 510 RFTV--KLSLRS------NLKAVY---VPADDLTDPAPATTFAHLDATTVLSPAIAELGV 656
F KL R+ ++ A Y V DDL +P +D VLS A+A+
Sbjct: 286 VFETLPKLLERAGSFSMGSVTAFYTVLVDGDDLDEPISDAVRGIVDGHIVLSRALAQRNH 345
Query: 657 YP 662
YP
Sbjct: 346 YP 347
>UniRef50_Q2I6N8 Cluster: ATP synthase beta chain; n=2; Gonyaulax
polyedra|Rep: ATP synthase beta chain - Gonyaulax
polyedra (Dinoflagellate)
Length = 253
Score = 38.7 bits (86), Expect = 0.12
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = +3
Query: 582 PAPATTFAHLDATTVLSPAIAELGVYP 662
PAP F HLDA TVLS +A G+YP
Sbjct: 63 PAPVVIFGHLDAVTVLSRVLAAKGIYP 89
>UniRef50_Q4PJ51 Cluster: Predicted F0F1-type ATP synthase beta
subunit; n=1; uncultured bacterium eBACred22E04|Rep:
Predicted F0F1-type ATP synthase beta subunit -
uncultured bacterium eBACred22E04
Length = 198
Score = 37.9 bits (84), Expect = 0.22
Identities = 19/42 (45%), Positives = 24/42 (57%)
Frame = +3
Query: 537 SNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYP 662
++++ VYV D T P T HLDAT VLS A LG+ P
Sbjct: 60 TSIQTVYVSTDARTHPIATRTSTHLDATVVLSRNNAGLGISP 101
>UniRef50_A4HP93 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania braziliensis
Length = 2623
Score = 35.5 bits (78), Expect = 1.1
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +3
Query: 429 IDNIFRFTQAGSEVRTRSSYQFEGRGGRFTVKLSLRSNLKAVYVPADDLTDPAPATTFAH 608
+D + T AG + TRSS+ G G RFT +SL ++++ + P + D A
Sbjct: 436 LDPVVEATVAGKGLCTRSSHLSGGAGTRFTAVVSLLDSVRSSWTPLPGMADSDDAAALTA 495
Query: 609 L 611
L
Sbjct: 496 L 496
>UniRef50_Q2CGJ3 Cluster: Flagellum-specific ATP synthase; n=1;
Oceanicola granulosus HTCC2516|Rep: Flagellum-specific
ATP synthase - Oceanicola granulosus HTCC2516
Length = 438
Score = 35.1 bits (77), Expect = 1.5
Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 16/112 (14%)
Frame = +3
Query: 375 VTLAEHFRDEEGQDLLLFIDNIFRFTQAGSEVRTRSSYQFEGRGGRFTV-----KLSLRS 539
+ +AEHFRD G+ +LL +D+I RF A E+ RG TV +L R+
Sbjct: 225 MAVAEHFRD-RGKQVLLLLDSITRFATAQREIGLSGGEPPTSRGYPPTVFAELPRLLERA 283
Query: 540 N-----------LKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYP 662
L V V D+ +P + D +L IAE G YP
Sbjct: 284 GPGCDGQGDITALFTVLVEGSDMEEPVADSVRGITDGHVILDRRIAERGRYP 335
>UniRef50_A5FHZ4 Cluster: Putative uncharacterized protein
precursor; n=1; Flavobacterium johnsoniae UW101|Rep:
Putative uncharacterized protein precursor -
Flavobacterium johnsoniae UW101
Length = 356
Score = 35.1 bits (77), Expect = 1.5
Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 2/35 (5%)
Frame = +3
Query: 564 ADDLTDPAPATTFAHLDATTVLSPA--IAELGVYP 662
++++T P P TTF+ +TT+ PA +AEL VYP
Sbjct: 254 SENVTPPTPGTTFSWTPSTTLSKPAFNLAELAVYP 288
>UniRef50_UPI0000EB4335 Cluster: UPI0000EB4335 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB4335 UniRef100
entry - Canis familiaris
Length = 377
Score = 34.7 bits (76), Expect = 2.0
Identities = 18/37 (48%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = -1
Query: 376 TRSRPPGHAPRGAHPSGRIPGTP--GSPARTPAKITS 272
TR PP HAPRG+ P PG P GS R P + S
Sbjct: 269 TRQPPPVHAPRGSLPRAPSPGLPPQGSLPRAPPRAPS 305
>UniRef50_Q9EZ19 Cluster: SpaL/InvC; n=4; Enterobacteriaceae|Rep:
SpaL/InvC - Sodalis glossinidius
Length = 437
Score = 34.3 bits (75), Expect = 2.7
Identities = 16/39 (41%), Positives = 27/39 (69%)
Frame = +3
Query: 354 CPGGLDRVTLAEHFRDEEGQDLLLFIDNIFRFTQAGSEV 470
C L T+AE+FRD +G+ ++LF+D++ RF +A +V
Sbjct: 230 CNAALVATTVAEYFRD-QGRRVVLFLDSLTRFARALRDV 267
>UniRef50_UPI0000F341A8 Cluster: UPI0000F341A8 related cluster; n=1;
Bos taurus|Rep: UPI0000F341A8 UniRef100 entry - Bos
Taurus
Length = 445
Score = 33.9 bits (74), Expect = 3.5
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -1
Query: 376 TRSRPPGHAPRGAHPSGRIPGTPGSPARTPAK 281
+R R G APR HPS + PG + ARTP++
Sbjct: 197 SRMRMGGRAPRPPHPSAQPPGPARTHARTPSR 228
>UniRef50_Q63K04 Cluster: Kumamolisin; n=33; Burkholderia|Rep:
Kumamolisin - Burkholderia pseudomallei (Pseudomonas
pseudomallei)
Length = 529
Score = 33.9 bits (74), Expect = 3.5
Identities = 46/157 (29%), Positives = 66/157 (42%), Gaps = 20/157 (12%)
Frame = +3
Query: 252 RNNQEFLEVIFAGVRAGDPGVPGIRPEG*APR-GACPGGLDRVTLAEHFRDEEG------ 410
R ++ L+ + G+ +GDPGV + E A R GA P D V E F + G
Sbjct: 37 RQQEQHLDSLLQGLASGDPGVKPVSREAFAQRFGAHP---DDVMKVEAFAQQRGLAVARV 93
Query: 411 ---QDLLLFIDNIFRFTQA-GSEVRT---RSSYQFEGRGGRFTVKLSLRSNLKAVYVPAD 569
+ L++ I +F A G ++ RS Q+ GR G T+ L + AV + D
Sbjct: 94 DPVESLVVLSGTIAQFEAAFGVKLERFEHRSIGQYRGRTGDITLPDELHGIVTAV-LGLD 152
Query: 570 DLTDPAP----ATTF--AHLDATTVLSPAIAELGVYP 662
D P TF A A T P +A L +P
Sbjct: 153 DRPQARPHFRLRPTFLPARAPAVTYTPPQLAALYDFP 189
>UniRef50_Q1CVR3 Cluster: Putative uncharacterized protein; n=1;
Myxococcus xanthus DK 1622|Rep: Putative uncharacterized
protein - Myxococcus xanthus (strain DK 1622)
Length = 335
Score = 33.9 bits (74), Expect = 3.5
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -2
Query: 417 SPGPPRLGSAQPRSPGQGHPGTRPVGL 337
+P PR G A PRSP HPG +P L
Sbjct: 171 APRRPRRGPAHPRSPAGAHPGRQPPAL 197
>UniRef50_Q67G29 Cluster: Cyclase; n=1; Streptomyces
griseoruber|Rep: Cyclase - Streptomyces griseoruber
Length = 321
Score = 33.5 bits (73), Expect = 4.6
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -1
Query: 361 PGHAPRGAHPSGRIPGTPGSPARTPAK 281
PGHA R R+ G PG+PAR+PA+
Sbjct: 249 PGHAVRPDGLGARLSGGPGAPARSPAR 275
>UniRef50_Q12T73 Cluster: ATPase FliI/YscN; n=1; Shewanella
denitrificans OS217|Rep: ATPase FliI/YscN - Shewanella
denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)
Length = 436
Score = 33.5 bits (73), Expect = 4.6
Identities = 22/54 (40%), Positives = 28/54 (51%)
Frame = +3
Query: 501 RGGRFTVKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYP 662
R G F + S+ + L +V V DD DP T A LD VL A+AE G +P
Sbjct: 293 RCGAFRHRASITA-LFSVLVETDDFDDPIVDTLRAVLDGHIVLDRALAEQGHFP 345
>UniRef50_O88737 Cluster: Protein bassoon; n=13; Euteleostomi|Rep:
Protein bassoon - Mus musculus (Mouse)
Length = 3942
Score = 33.5 bits (73), Expect = 4.6
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = -1
Query: 361 PGHAPRGAHPSGRIPGTPGSPARTP 287
PG P GA P R GTPG+PA P
Sbjct: 3880 PGPGPAGAKPGARPGGTPGAPAGQP 3904
>UniRef50_A7HIT8 Cluster: Putative uncharacterized protein; n=2;
Anaeromyxobacter|Rep: Putative uncharacterized protein -
Anaeromyxobacter sp. Fw109-5
Length = 597
Score = 33.1 bits (72), Expect = 6.1
Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Frame = +2
Query: 269 PRSNLRR---STSWRPGRPWYTARRMSPTGRVPGWP 367
PR + RR +++ R GRP ARR +P+GR PG P
Sbjct: 11 PRGDQRRRLSASARRSGRPVGVARRRAPSGRSPGMP 46
>UniRef50_UPI0000E48CBD Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 2606
Score = 32.7 bits (71), Expect = 8.1
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Frame = +3
Query: 432 DNIFRFTQAGSE---VRTRSSYQFEGRGGRFTVKLSLRSNLKAVYVPADDL 575
DNI ++T +G+ R SY+F+ RG FTV + S++ +V++ + L
Sbjct: 197 DNINQYTNSGTNSCMTANRVSYEFDFRGPSFTVDTACSSSMYSVHLACEAL 247
>UniRef50_Q3J9F4 Cluster: Sodium-transporting two-sector ATPase;
n=5; cellular organisms|Rep: Sodium-transporting
two-sector ATPase - Nitrosococcus oceani (strain ATCC
19707 / NCIMB 11848)
Length = 479
Score = 32.7 bits (71), Expect = 8.1
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +3
Query: 501 RGGRFTVKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYP 662
R GR + + + V +P+DD+T P P T + VLS + G+YP
Sbjct: 288 RAGRIKNRRGSITMVPVVSMPSDDITHPIPDLTGYITEGQIVLSRELHHQGIYP 341
>UniRef50_Q2IQ94 Cluster: Sodium-transporting two-sector ATPase;
n=3; Bacteria|Rep: Sodium-transporting two-sector ATPase
- Anaeromyxobacter dehalogenans (strain 2CP-C)
Length = 475
Score = 32.7 bits (71), Expect = 8.1
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +3
Query: 501 RGGRFTVKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYP 662
R GR + + L + +P DDLT P P T + VLS + GVYP
Sbjct: 295 RAGRVRGRPGSLTQLPVLTMPDDDLTHPIPDLTGYITEGQIVLSRDLDRRGVYP 348
>UniRef50_Q02CE4 Cluster: Tannase and feruloyl esterase precursor;
n=1; Solibacter usitatus Ellin6076|Rep: Tannase and
feruloyl esterase precursor - Solibacter usitatus
(strain Ellin6076)
Length = 629
Score = 32.7 bits (71), Expect = 8.1
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3
Query: 306 PGVPGIRPEG*APRGACPGG 365
PG+PG P+G AP GA PGG
Sbjct: 177 PGIPGRGPQGAAPAGAGPGG 196
>UniRef50_A7RXQ2 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 937
Score = 32.7 bits (71), Expect = 8.1
Identities = 14/27 (51%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = -1
Query: 364 PPGHAPRG-AHPSGRIPGTPGSPARTP 287
PPGH P G HP G + G P P R P
Sbjct: 39 PPGHGPPGRGHPPGFMGGPPRGPPRQP 65
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 517,111,627
Number of Sequences: 1657284
Number of extensions: 9446309
Number of successful extensions: 39046
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 34302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38943
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50413227838
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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