Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9a19
         (664 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   3.7  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    23   6.5  
AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     23   8.6  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   8.6  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -2

Query: 426 TTVSPGPPRLGSAQPRSPGQGHP 358
           T   P PPR G   P+ PG   P
Sbjct: 205 TPTQPQPPRPGGMYPQPPGVPMP 227


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = -3

Query: 332 FWPYTRDARVSSSYSGEDYFEELLIIAAHIYIFK 231
           +WP T D    +S       EEL  IAAH+ I K
Sbjct: 418 YWPETDDVDSGASDFDRVTPEELQEIAAHMAIRK 451


>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 302 RPGRPWYTARRMSP 343
           RPGRPW++   + P
Sbjct: 78  RPGRPWWSVPGIPP 91


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +3

Query: 300 GDPGVPGIRPEG*APRGACPGG 365
           G+PGVPG+R     P    P G
Sbjct: 317 GEPGVPGLRGNDGIPGLEGPSG 338


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 530,771
Number of Sequences: 2352
Number of extensions: 9196
Number of successful extensions: 41
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)