Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9a16
         (147 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7RA63 Cluster: Arabidopsis thaliana At1g71270/F3I17_8;...    31   4.9  
UniRef50_Q55AP3 Cluster: G-protein-coupled receptor (GPCR) famil...    31   6.5  
UniRef50_Q54XQ0 Cluster: Putative uncharacterized protein; n=1; ...    31   6.5  

>UniRef50_Q7RA63 Cluster: Arabidopsis thaliana At1g71270/F3I17_8;
           n=3; Plasmodium (Vinckeia)|Rep: Arabidopsis thaliana
           At1g71270/F3I17_8 - Plasmodium yoelii yoelii
          Length = 1050

 Score = 31.1 bits (67), Expect = 4.9
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
 Frame = -1

Query: 147 FFFSFDIHFIEVMFEISNSVINANT--VRFIYNFYRLSFIRKNNSVNK 10
           F  +F+   I V+  +SN+  N N   +  I N+Y +  I KNN +N+
Sbjct: 839 FISNFENMIINVLLNLSNNFQNINDKLLFLINNYYHIITILKNNKINE 886


>UniRef50_Q55AP3 Cluster: G-protein-coupled receptor (GPCR) family
           protein; n=3; Dictyostelium discoideum|Rep:
           G-protein-coupled receptor (GPCR) family protein -
           Dictyostelium discoideum AX4
          Length = 819

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 15/45 (33%), Positives = 27/45 (60%)
 Frame = -1

Query: 147 FFFSFDIHFIEVMFEISNSVINANTVRFIYNFYRLSFIRKNNSVN 13
           F FSF + + +++ +I+N++IN + V +    Y  SF R N + N
Sbjct: 256 FPFSFKLEWSQLLIDITNTIINGSWVDYDI-IYITSFSRLNGTTN 299


>UniRef50_Q54XQ0 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 194

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 17/45 (37%), Positives = 25/45 (55%)
 Frame = -1

Query: 147 FFFSFDIHFIEVMFEISNSVINANTVRFIYNFYRLSFIRKNNSVN 13
           +F SF ++FI     I+N+  N NTV   Y+ Y   + R NN+ N
Sbjct: 18  WFHSFFLYFISFWMGINNNKNNNNTVETGYHSYH-PYSRNNNNNN 61


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,003,811
Number of Sequences: 1657284
Number of extensions: 1224145
Number of successful extensions: 3337
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3333
length of database: 575,637,011
effective HSP length: 29
effective length of database: 527,575,775
effective search space used: 10023939725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)