Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9a16
         (147 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024799-4|AAK72318.1|  536|Caenorhabditis elegans Hypothetical ...    29   0.59 
U88311-4|AAB42344.1|  537|Caenorhabditis elegans Udp-glucuronosy...    27   2.4  
Z81124-5|CAB03374.1|  328|Caenorhabditis elegans Hypothetical pr...    25   7.3  
Z50742-2|CAA90616.1|  491|Caenorhabditis elegans Hypothetical pr...    25   7.3  
Z68114-1|CAA92152.1|  451|Caenorhabditis elegans Hypothetical pr...    25   9.7  

>AC024799-4|AAK72318.1|  536|Caenorhabditis elegans Hypothetical
           protein Y49C4A.8a protein.
          Length = 536

 Score = 28.7 bits (61), Expect = 0.59
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = -1

Query: 132 DIHFIEVMFEISNSVINANTVRFIYNFYRLSFIRKNNSVN 13
           DI+ +  +F I  S I   T+RF+Y F R  FI   +  N
Sbjct: 497 DIYTLFALFYIFVSTIIIVTIRFVYKFTRKHFILVKSKEN 536


>U88311-4|AAB42344.1|  537|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein28 protein.
          Length = 537

 Score = 26.6 bits (56), Expect = 2.4
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -1

Query: 135 FDIHFIEVMFEISNSVINANTVRFIYNFYRLSF 37
           FDI+ +  +F IS   I A ++RFIY   R  F
Sbjct: 496 FDIYALFALFYISVGTIIAISIRFIYQKARKYF 528


>Z81124-5|CAB03374.1|  328|Caenorhabditis elegans Hypothetical
           protein T21B4.7 protein.
          Length = 328

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -1

Query: 120 IEVMFEISNSVINANTVRFIYNFYRLSFIRKN 25
           I ++FE  +S+I  N  RF  N YR+ +I  N
Sbjct: 120 IILLFENRSSMILENKFRFSINLYRVIWIFLN 151


>Z50742-2|CAA90616.1|  491|Caenorhabditis elegans Hypothetical
          protein K09A11.2 protein.
          Length = 491

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -2

Query: 77 IQFVLFIIFIDFHLFVKIT 21
          + FV+FIIF  FH + K++
Sbjct: 6  LAFVIFIIFYVFHFYWKVS 24


>Z68114-1|CAA92152.1|  451|Caenorhabditis elegans Hypothetical
           protein F17A2.1 protein.
          Length = 451

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -1

Query: 114 VMFEIS-NSVINANTVRFIYNFYRLSFIRKNNSVNKLYG 1
           VM++ S   +I   TVR +   Y++  I KN  ++ L+G
Sbjct: 275 VMYKGSLQKIIAVQTVRHVDYQYQIYIINKNKPIDILFG 313


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,641,946
Number of Sequences: 27780
Number of extensions: 31655
Number of successful extensions: 91
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 91
length of database: 12,740,198
effective HSP length: 29
effective length of database: 11,934,578
effective search space used: 226756982
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)