Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9a15
         (746 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY059456-1|AAL13362.1|  228|Drosophila melanogaster LD37206p pro...   165   4e-41
AE014134-1904|ABC65892.1|  228|Drosophila melanogaster CG6144-PB...   165   4e-41
AE014134-1903|AAF52964.3|  228|Drosophila melanogaster CG6144-PA...   165   4e-41
AE013599-3420|AAF46867.1|  615|Drosophila melanogaster CG17807-P...    44   2e-04
AY069858-1|AAL40003.1|  615|Drosophila melanogaster SD10403p pro...    44   3e-04
L13305-1|AAC37169.1|  799|Drosophila melanogaster integrin beta ...    31   1.3  
AE014134-1282|AAF52519.2|  450|Drosophila melanogaster CG13787-P...    31   2.2  
AE014134-3326|AAF53952.1|  799|Drosophila melanogaster CG1762-PA...    30   2.9  

>AY059456-1|AAL13362.1|  228|Drosophila melanogaster LD37206p
           protein.
          Length = 228

 Score =  165 bits (402), Expect = 4e-41
 Identities = 78/133 (58%), Positives = 94/133 (70%), Gaps = 3/133 (2%)
 Frame = +1

Query: 244 VIKAEPTAYYISKFITEAEEQLILSNIYAAPKPKWTQLSNRRLQNWGGVPHNKGMIAETI 423
           V K  PT  YI  FIT  EEQ ILS+I   PKP+WTQL NRRL N+GGVPH  GMIAE I
Sbjct: 8   VRKCPPTVMYIPNFITSEEEQRILSHIERTPKPRWTQLLNRRLVNYGGVPHPNGMIAEEI 67

Query: 424 PTWLDLYLERIHKLNVMCGRRPNHVLVNEYTPGQGIMPHLDGNLFYPTITTISVGSHIVL 603
           P WL  Y+++++ L V   +  NHVLVNEY PGQGI+PH DG LF+P I+TIS G+H VL
Sbjct: 68  PEWLQTYVDKVNNLGVFESQNANHVLVNEYLPGQGILPHTDGPLFHPIISTISTGAHTVL 127

Query: 604 KFLK---PTTDNE 633
           +F+K    TT+ E
Sbjct: 128 EFVKREDTTTETE 140



 Score = 43.6 bits (98), Expect = 3e-04
 Identities = 19/30 (63%), Positives = 24/30 (80%)
 Frame = +2

Query: 656 FSFLLEPRSLLILQDKLFSXYLHSIEELNE 745
           F  LLEPRSLLIL+D L++ YLH+I E +E
Sbjct: 151 FKLLLEPRSLLILKDTLYTDYLHAISETSE 180


>AE014134-1904|ABC65892.1|  228|Drosophila melanogaster CG6144-PB,
           isoform B protein.
          Length = 228

 Score =  165 bits (402), Expect = 4e-41
 Identities = 78/133 (58%), Positives = 94/133 (70%), Gaps = 3/133 (2%)
 Frame = +1

Query: 244 VIKAEPTAYYISKFITEAEEQLILSNIYAAPKPKWTQLSNRRLQNWGGVPHNKGMIAETI 423
           V K  PT  YI  FIT  EEQ ILS+I   PKP+WTQL NRRL N+GGVPH  GMIAE I
Sbjct: 8   VRKCPPTVMYIPNFITSEEEQRILSHIERTPKPRWTQLLNRRLVNYGGVPHPNGMIAEEI 67

Query: 424 PTWLDLYLERIHKLNVMCGRRPNHVLVNEYTPGQGIMPHLDGNLFYPTITTISVGSHIVL 603
           P WL  Y+++++ L V   +  NHVLVNEY PGQGI+PH DG LF+P I+TIS G+H VL
Sbjct: 68  PEWLQTYVDKVNNLGVFESQNANHVLVNEYLPGQGILPHTDGPLFHPIISTISTGAHTVL 127

Query: 604 KFLK---PTTDNE 633
           +F+K    TT+ E
Sbjct: 128 EFVKREDTTTETE 140



 Score = 43.6 bits (98), Expect = 3e-04
 Identities = 19/30 (63%), Positives = 24/30 (80%)
 Frame = +2

Query: 656 FSFLLEPRSLLILQDKLFSXYLHSIEELNE 745
           F  LLEPRSLLIL+D L++ YLH+I E +E
Sbjct: 151 FKLLLEPRSLLILKDTLYTDYLHAISETSE 180


>AE014134-1903|AAF52964.3|  228|Drosophila melanogaster CG6144-PA,
           isoform A protein.
          Length = 228

 Score =  165 bits (402), Expect = 4e-41
 Identities = 78/133 (58%), Positives = 94/133 (70%), Gaps = 3/133 (2%)
 Frame = +1

Query: 244 VIKAEPTAYYISKFITEAEEQLILSNIYAAPKPKWTQLSNRRLQNWGGVPHNKGMIAETI 423
           V K  PT  YI  FIT  EEQ ILS+I   PKP+WTQL NRRL N+GGVPH  GMIAE I
Sbjct: 8   VRKCPPTVMYIPNFITSEEEQRILSHIERTPKPRWTQLLNRRLVNYGGVPHPNGMIAEEI 67

Query: 424 PTWLDLYLERIHKLNVMCGRRPNHVLVNEYTPGQGIMPHLDGNLFYPTITTISVGSHIVL 603
           P WL  Y+++++ L V   +  NHVLVNEY PGQGI+PH DG LF+P I+TIS G+H VL
Sbjct: 68  PEWLQTYVDKVNNLGVFESQNANHVLVNEYLPGQGILPHTDGPLFHPIISTISTGAHTVL 127

Query: 604 KFLK---PTTDNE 633
           +F+K    TT+ E
Sbjct: 128 EFVKREDTTTETE 140



 Score = 43.6 bits (98), Expect = 3e-04
 Identities = 19/30 (63%), Positives = 24/30 (80%)
 Frame = +2

Query: 656 FSFLLEPRSLLILQDKLFSXYLHSIEELNE 745
           F  LLEPRSLLIL+D L++ YLH+I E +E
Sbjct: 151 FKLLLEPRSLLILKDTLYTDYLHAISETSE 180


>AE013599-3420|AAF46867.1|  615|Drosophila melanogaster CG17807-PA
           protein.
          Length = 615

 Score = 44.0 bits (99), Expect = 2e-04
 Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 12/126 (9%)
 Frame = +1

Query: 268 YYISKFITEAEEQLILSNIYAAPKPKWT--QLSNRRLQNWG--------GVPHNKGMIAE 417
           + I+ F+TE EE  +L  I    +       L +R ++++G         V  +K +  +
Sbjct: 138 HIIADFVTEEEESTLLRAIGEDGRTSEVTGSLKHRNVKHFGFEFLYGTNNVDPSKPL-EQ 196

Query: 418 TIPTWLDLYLERIHKL-NVMCGRRPNHVLVNEYTPGQGIMPHLD-GNLFYPTITTISVGS 591
           +IP+  D+   R++   +      P+ + VNEY PG GI PH+D  + F   I ++S+ S
Sbjct: 197 SIPSACDILWPRLNSFASTWDWSSPDQLTVNEYEPGHGIPPHVDTHSAFLDPILSLSLQS 256

Query: 592 HIVLKF 609
            +V+ F
Sbjct: 257 DVVMDF 262


>AY069858-1|AAL40003.1|  615|Drosophila melanogaster SD10403p
           protein.
          Length = 615

 Score = 43.6 bits (98), Expect = 3e-04
 Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 12/126 (9%)
 Frame = +1

Query: 268 YYISKFITEAEEQLILSNIYAAPKPK--WTQLSNRRLQNWG--------GVPHNKGMIAE 417
           + I+ F+TE EE  +L  I    +       L +R ++++G         V  +K +  +
Sbjct: 138 HIIADFVTEEEESTLLRAIGEDGRTSEGTGSLKHRNVKHFGFEFLYGTNNVDPSKPL-EQ 196

Query: 418 TIPTWLDLYLERIHKL-NVMCGRRPNHVLVNEYTPGQGIMPHLD-GNLFYPTITTISVGS 591
           +IP+  D+   R++   +      P+ + VNEY PG GI PH+D  + F   I ++S+ S
Sbjct: 197 SIPSACDILWPRLNSFASTWDWSSPDQLTVNEYEPGHGIPPHVDTHSAFLDPILSLSLQS 256

Query: 592 HIVLKF 609
            +V+ F
Sbjct: 257 DVVMDF 262


>L13305-1|AAC37169.1|  799|Drosophila melanogaster integrin beta
           subunit protein.
          Length = 799

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
 Frame = -1

Query: 671 LTKKKXIGCISTFSLSVVGFKNFKTM----CEPTDIVVMVG 561
           L  K  I C S F+  V+   NF T+    CEP D V +VG
Sbjct: 688 LVNKHGIQCDSFFAYQVIDHSNFLTIQAVDCEPPDYVALVG 728


>AE014134-1282|AAF52519.2|  450|Drosophila melanogaster CG13787-PA
           protein.
          Length = 450

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = -3

Query: 285 EFTNVICSRFSLYY-YVIFNICYICHHYSLVFICTCSP*FL*F 160
           ++  ++ S F +    ++FN+ Y+C  YSL+   T SP F+ F
Sbjct: 135 DYRRILLSSFLISLGMLLFNVIYLCVSYSLLVSATISPSFVTF 177


>AE014134-3326|AAF53952.1|  799|Drosophila melanogaster CG1762-PA
           protein.
          Length = 799

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
 Frame = -1

Query: 671 LTKKKXIGCISTFSLSVVGFKNFKTM----CEPTDIVVMVG 561
           L  K  I C S F   V+   NF T+    CEP D V +VG
Sbjct: 688 LVNKHGIQCDSFFVYQVIDHSNFLTIQAVDCEPPDYVALVG 728


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,522,916
Number of Sequences: 53049
Number of extensions: 661338
Number of successful extensions: 1334
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1304
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1334
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3396574665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)