Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9a15
         (746 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73422-1|CAA97764.1|  160|Caenorhabditis elegans Hypothetical pr...   116   1e-26
Z37139-6|CAB63431.2|  591|Caenorhabditis elegans Hypothetical pr...    33   0.21 
Z83229-3|CAB05740.3|  369|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z78418-2|CAB01695.1|  817|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>Z73422-1|CAA97764.1|  160|Caenorhabditis elegans Hypothetical
           protein B0564.2 protein.
          Length = 160

 Score =  116 bits (280), Expect = 1e-26
 Identities = 64/153 (41%), Positives = 91/153 (59%), Gaps = 2/153 (1%)
 Frame = +1

Query: 226 NIEDHIVIKAEPTAYYISKFITEAEEQLILSNIYAAPKPKWTQLSNRRLQNWGGVPHNKG 405
           NI+  IV  A  T  YI  +I E EE L  S I  AP+PKW  L+NRRLQN+GGV     
Sbjct: 10  NIKKFIVKSAPATMIYIPNWIDEEEENLYKSCIENAPQPKWRVLANRRLQNYGGVVGKTA 69

Query: 406 MI-AETIPTWLDLYLERIHKLNVMCGRRP-NHVLVNEYTPGQGIMPHLDGNLFYPTITTI 579
           +I  +  P  L   + +I+ L +   + P NHVLVNEY  GQGIMPH DG  F+  +TT+
Sbjct: 70  LIPTDDFPVELKYLMTKINDLGIF--KNPVNHVLVNEYEAGQGIMPHTDGPAFHRIVTTV 127

Query: 580 SVGSHIVLKFLKPTTDNEKVEMQPMXFFFVRTK 678
           ++GSH +L    P   +++V ++ +  F +++K
Sbjct: 128 TLGSHCLLDMYDPV--DQEVNLRYLFTFIIQSK 158


>Z37139-6|CAB63431.2|  591|Caenorhabditis elegans Hypothetical
           protein C14B1.10 protein.
          Length = 591

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
 Frame = +1

Query: 412 AETIPTWLDLYLERIHKLNVMCGRRPNHVLVNEYTPGQGIMPHLD-GNLFYPTITTISVG 588
           A+ IP  ++  ++R+     +   RP+ V  N Y  G GI  H D  + F   I +IS+ 
Sbjct: 194 ADPIPPVINSLIDRLISDKYIT-ERPDQVTANVYESGHGIPSHYDTHSAFDDPIVSISLL 252

Query: 589 SHIVLKF 609
           S +V++F
Sbjct: 253 SDVVMEF 259


>Z83229-3|CAB05740.3|  369|Caenorhabditis elegans Hypothetical
           protein F54F11.3 protein.
          Length = 369

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 17/43 (39%), Positives = 21/43 (48%)
 Frame = -1

Query: 410 IIPLLCGTPPQFCNLRFDSCVHLGFGAAYMFDSISCSSASVMN 282
           I+P L G+   + N  F S V LGF A      I  SS S+ N
Sbjct: 303 IVPTLLGSVNAWRNFTFSSGVCLGFKAQVRLKIIKVSSVSIGN 345


>Z78418-2|CAB01695.1|  817|Caenorhabditis elegans Hypothetical
           protein F25D7.3 protein.
          Length = 817

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 334 PKPKWTQLSNRRLQNWGGVPHNKGMI 411
           P P+  Q+ +  +QN GG+PH   +I
Sbjct: 753 PPPQHFQMDHSGMQNGGGIPHQHQLI 778


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,771,155
Number of Sequences: 27780
Number of extensions: 363174
Number of successful extensions: 773
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 772
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)