Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9a14
         (580 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    24   0.81 
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    23   1.9  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    23   1.9  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   3.3  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    22   3.3  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   7.6  

>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 24.2 bits (50), Expect = 0.81
 Identities = 11/43 (25%), Positives = 22/43 (51%)
 Frame = -3

Query: 542 KITLKIQIRHKFYVLRCENHLAPDRFGQHGLLHTGDEFFFSLD 414
           K  +KI +  +F++   E+  AP+ + +H +   GD     +D
Sbjct: 487 KPDVKIFLPFRFHIYTPEDLFAPNTYNRHLVAPNGDHVISLID 529


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +1

Query: 67  YVTAFHEFRDYGSLVNCID*SGIFLIFVSY 156
           + T  H+     SLV  I    IFL+FVSY
Sbjct: 166 FKTLTHDEPRKSSLVQLILTQAIFLMFVSY 195


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +1

Query: 67  YVTAFHEFRDYGSLVNCID*SGIFLIFVSY 156
           + T  H+     SLV  I    IFL+FVSY
Sbjct: 92  FKTLTHDEPRKSSLVQLILTQAIFLMFVSY 121


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 55  DFQNYVTAFHEFRD 96
           D QNY T   EFR+
Sbjct: 157 DIQNYATLIKEFRE 170


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory
          receptor candidate 35 protein.
          Length = 251

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +1

Query: 40 TNLSEDFQNYVTAF 81
          T L  DF+NYVT F
Sbjct: 40 TYLVSDFENYVTFF 53


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -3

Query: 395 VSKTIGPHAIQP 360
           V KT GPH  QP
Sbjct: 202 VIKTSGPHKFQP 213


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,776
Number of Sequences: 336
Number of extensions: 2674
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14412858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)