BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9a13
(413 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1118 + 27756288-27756337,27756505-27756619,27756883-277570... 96 1e-20
01_06_0663 - 30991390-30992340 76 1e-14
05_07_0134 - 27911920-27912762 62 1e-10
02_04_0261 + 21363787-21363891,21364185-21364286,21365854-213659... 60 5e-10
06_01_1052 + 8312752-8312862,8312969-8313041,8313285-8313362,831... 46 1e-05
01_05_0431 - 22084474-22084635,22084740-22084844,22084931-220850... 35 0.022
06_03_0219 - 18227559-18227858,18227864-18228340 35 0.030
02_01_0384 - 2781362-2782299,2782320-2782428 33 0.090
06_01_0080 + 644021-645463 31 0.48
07_03_1086 + 23858419-23859423,23859527-23859610 29 1.5
11_06_0689 - 26294961-26294976,26295271-26295414,26295506-262959... 29 1.9
02_04_0463 + 23135732-23136888,23138956-23139333,23139506-23139530 28 2.6
06_03_0912 + 25896152-25896451,25896528-25897296,25897492-258976... 28 3.4
11_06_0215 - 21332429-21333037,21333605-21333649 27 4.5
10_08_0633 + 19446075-19446488,19446607-19446975,19447961-194480... 27 4.5
08_02_0707 - 20212190-20214592 27 4.5
01_01_1099 - 8700627-8700710,8701148-8701200,8701287-8701344,870... 27 4.5
05_04_0038 + 17403620-17403769,17403975-17404038,17404807-174048... 27 5.9
04_04_1575 + 34548774-34549109,34549979-34550185 27 5.9
03_02_0712 - 10600147-10600196,10600257-10600378,10600993-106014... 27 5.9
02_05_0308 - 27754340-27754634,27755591-27755696,27755781-277558... 27 5.9
02_01_0447 - 3220489-3220560,3221287-3221420,3221500-3221731,322... 27 5.9
09_04_0539 - 18416184-18416830,18417983-18419057 27 7.8
07_01_1120 - 10338265-10338624,10338739-10338873,10339411-10340451 27 7.8
04_04_0179 - 23342764-23342973,23343185-23343340,23343535-233435... 27 7.8
03_06_0711 - 35682293-35682952 27 7.8
>06_03_1118 +
27756288-27756337,27756505-27756619,27756883-27757033,
27757219-27757301,27757424-27757519,27757615-27757757,
27757858-27757942,27758158-27758237,27758335-27758422
Length = 296
Score = 95.9 bits (228), Expect = 1e-20
Identities = 59/149 (39%), Positives = 86/149 (57%), Gaps = 12/149 (8%)
Frame = +1
Query: 1 VVVSILTSNKVVLDVYLGKDGVVAHAK-KGS-LLIDSSTIDPNVPKQIFP----IALEKG 162
VV+++L S+ VLDVY G++G++A+ G L IDSST+DP ++I L++
Sbjct: 45 VVITMLPSSAHVLDVYNGRNGLLANGGCLGPWLYIDSSTVDPQTSRKISMDISRCTLKEK 104
Query: 163 LGFT------DAPVSGGVMGAQNATLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSG 324
+ DAPVSGGV A+ L FM GG +E + + PLL MG K +CG G+G
Sbjct: 105 KAYAEKPMMLDAPVSGGVPAAEAGKLTFMVGGSEEAYLAAKPLLLSMGKKTIYCGGAGNG 164
Query: 325 QVAKLTNNMLMGITGMATAECMNMGIKMG 411
VAK+ NNM M I+ + +E +G +G
Sbjct: 165 SVAKICNNMAMAISMLGVSEAFALGQNLG 193
>01_06_0663 - 30991390-30992340
Length = 316
Score = 76.2 bits (179), Expect = 1e-14
Identities = 46/117 (39%), Positives = 60/117 (51%)
Frame = +1
Query: 61 GVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGAQNATLAFMAGG 240
G +A G LL+D +T DP + +I A K DAPVSGG GA++ATL+ AGG
Sbjct: 99 GALAGLAPGGLLVDMTTSDPTLAAEIAEAAAAKSCAAVDAPVSGGDRGARSATLSIFAGG 158
Query: 241 RKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGITGMATAECMNMGIKMG 411
R PL K+MG + G G+GQ AKL N + + T + E M K G
Sbjct: 159 DAAVVARLAPLFKLMG-NALYMGGPGAGQRAKLGNQIAIASTMVGLVEGMVYAHKAG 214
>05_07_0134 - 27911920-27912762
Length = 280
Score = 62.5 bits (145), Expect = 1e-10
Identities = 37/120 (30%), Positives = 64/120 (53%)
Frame = +1
Query: 31 VVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGAQ 210
VVLD GV+A + G +L+D ++ P++ +++ A G D+PVSGG +GA+
Sbjct: 59 VVLDA---ASGVLAGLRPGGVLVDCTSSSPSLAREVAAAARAAGCYAVDSPVSGGDVGAR 115
Query: 211 NATLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGITGMATAECM 390
+ LA +AGG + PL +G + + G GSGQ +K+ N + + + +E +
Sbjct: 116 DGALALLAGGDEAVVSWLAPLFAHLG-RPTYMGPPGSGQSSKIANQIAVAGAVVGASEAL 174
>02_04_0261 +
21363787-21363891,21364185-21364286,21365854-21365964,
21366233-21366334,21366901-21367016,21367180-21367258,
21367347-21367517,21367617-21367712
Length = 293
Score = 60.5 bits (140), Expect = 5e-10
Identities = 31/86 (36%), Positives = 47/86 (54%)
Frame = +1
Query: 154 EKGLGFTDAPVSGGVMGAQNATLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVA 333
+KG F +APVSG A++ L +A G K ++ +P V+G K F G+IG+G
Sbjct: 110 QKGGAFVEAPVSGSKKPAEDGQLVILAAGDKVLYDDMVPAFDVLGKKSFFLGEIGNGAKM 169
Query: 334 KLTNNMLMGITGMATAECMNMGIKMG 411
KL NM+MG A +E +++ G
Sbjct: 170 KLVVNMIMGSMMNALSEGLSLADNSG 195
>06_01_1052 +
8312752-8312862,8312969-8313041,8313285-8313362,
8313443-8313523,8313706-8313779,8313865-8313919,
8314031-8314079,8314222-8314359,8314455-8314536,
8315131-8315209,8315357-8315400,8315479-8315673,
8316110-8316185,8317427-8317507,8317623-8317703,
8318128-8318204,8318402-8318499,8318672-8318809,
8319397-8319478,8319564-8319642,8319885-8319931,
8320014-8320228,8320330-8320450,8320529-8320648,
8320731-8320849,8320964-8321036,8321112-8321231,
8321538-8321606,8321756-8321926,8322004-8322051,
8322192-8322333,8323244-8323341,8323684-8323828,
8323928-8324013,8324112-8324222,8324456-8324530,
8324836-8324901,8325036-8325224,8325315-8325425,
8326616-8326696,8327192-8327371
Length = 1385
Score = 46.0 bits (104), Expect = 1e-05
Identities = 40/139 (28%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Frame = +1
Query: 4 VVSILTSNKVVLD-VYLGKDGVVAHAKKGSLLIDSSTIDPN-VPKQIFPIALE-KGLGFT 174
++ I+ +N+V + V G G V+ G+ +I SST+ P V K + E + +
Sbjct: 382 ILVIMVANEVQAENVLYGNAGAVSVMAAGTSIILSSTVSPGFVIKLKERLEAECRDIKLV 441
Query: 175 DAPVSGGVMGAQNATLAFMAGGRKEDFERSLPLLKVMGAKQFHC-GQIGSGQVAKLTNNM 351
DAPVSGGV A TL +K + S+ + + K + G G+ K+ N +
Sbjct: 442 DAPVSGGVKRAAEGTLT--TNMQKLVHDCSIFYVTALSEKLYVIKGGCGAASSVKMVNQL 499
Query: 352 LMGITGMATAECMNMGIKM 408
L G+ + AE M G ++
Sbjct: 500 LAGVHIASAAEAMAFGARL 518
>01_05_0431 -
22084474-22084635,22084740-22084844,22084931-22085003,
22085109-22085179,22085429-22085548,22085631-22085715,
22085812-22085867,22085978-22086053,22086546-22086611,
22086843-22087060
Length = 343
Score = 35.1 bits (77), Expect = 0.022
Identities = 30/139 (21%), Positives = 55/139 (39%), Gaps = 2/139 (1%)
Frame = +1
Query: 1 VVVSILTSNKVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTD- 177
V ++L + ++V G +G G +D ST+D K I G F +
Sbjct: 109 VTFAMLADPESAVEVACGANGAAQGMAPGKGYVDVSTVDAATSKLIGKHITSTGASFLER 168
Query: 178 APVSGGVMGAQNATLAFMA-GGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNML 354
S +G F + + ++ + + +F G +G G KL NM+
Sbjct: 169 CDFSSCTVGPMLTRYLFSRLQFQAQKSQQKMGCSSFLPQSRFFLGDVGKGADMKLVVNMV 228
Query: 355 MGITGMATAECMNMGIKMG 411
MG ++ +E + + K+G
Sbjct: 229 MGSMMVSFSEGLLLSEKVG 247
>06_03_0219 - 18227559-18227858,18227864-18228340
Length = 258
Score = 34.7 bits (76), Expect = 0.030
Identities = 26/74 (35%), Positives = 35/74 (47%)
Frame = -1
Query: 374 AIPVMPINMLLVSLATCPEPICPQWNCLAPITLRRGRDLSKSSLRPPAMKARVAF*APMT 195
++PV+PI+ L V+L + P P C A T+RR S PP R+A P
Sbjct: 56 SLPVVPIH-LPVALLSLPRCRPPPAACAAS-TVRRPAAPSPPPASPPPPPPRLALRFPRR 113
Query: 194 PPDTGASVNPSPFS 153
PP+ PS FS
Sbjct: 114 PPELPPRRRPSRFS 127
>02_01_0384 - 2781362-2782299,2782320-2782428
Length = 348
Score = 33.1 bits (72), Expect = 0.090
Identities = 23/74 (31%), Positives = 30/74 (40%)
Frame = -1
Query: 338 SLATCPEPICPQWNCLAPITLRRGRDLSKSSLRPPAMKARVAF*APMTPPDTGASVNPSP 159
S A P P++ +T R LS ++ PA +R P +PP GAS P
Sbjct: 180 SSAIPPPATAPRFPPPRAMTARTALALSPTTSASPASPSRTRLAPPRSPPAGGASGAPRR 239
Query: 158 FSRAIGKICLGTFG 117
S A C G G
Sbjct: 240 SSSAASPSCAGVEG 253
>06_01_0080 + 644021-645463
Length = 480
Score = 30.7 bits (66), Expect = 0.48
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 7/102 (6%)
Frame = +1
Query: 64 VVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGAQNATLAFMAGGR 243
+ AH ++G +ID ++ E+GL + VSGG GA+N + M GG
Sbjct: 90 LAAHLEQGDCIIDGGNEWYENTERREKAMEERGLLYLGMGVSGGEEGARNGP-SLMPGGS 148
Query: 244 KEDFERSLP-LLKV------MGAKQFHCGQIGSGQVAKLTNN 348
E ++ LLKV G + G+ GSG K+ +N
Sbjct: 149 FEAYKYIEDILLKVAAQVPDSGPCVTYIGKGGSGNFVKMVHN 190
>07_03_1086 + 23858419-23859423,23859527-23859610
Length = 362
Score = 29.1 bits (62), Expect = 1.5
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = +3
Query: 57 RWRCGSCEKRIASDRFEYNRSECSQTDLPYSPRERAGIHR 176
R R SC SEC DL ++P AGIHR
Sbjct: 10 RRRSTSCYSDSGDSSCSEPFSECGSDDLSFTPAAAAGIHR 49
>11_06_0689 -
26294961-26294976,26295271-26295414,26295506-26295909,
26296112-26296261,26296334-26296497,26296526-26296836,
26296948-26297084,26297276-26297416,26297821-26297867,
26297977-26298072,26298168-26298249,26298332-26298472,
26298607-26298702,26298809-26298877,26298959-26299030,
26299201-26299368,26299577-26299711,26299792-26299958,
26301213-26301369
Length = 898
Score = 28.7 bits (61), Expect = 1.9
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 204 THDSSRYRCICESQPFL*GYREDLFGNIRIYC 109
+H +S Y + E L +DL GNIR+YC
Sbjct: 370 SHAASGYHKVLEENRKLYNQIQDLRGNIRVYC 401
>02_04_0463 + 23135732-23136888,23138956-23139333,23139506-23139530
Length = 519
Score = 28.3 bits (60), Expect = 2.6
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = -1
Query: 305 QWNCLAPITLRRG-RDLSKSSLRPPAMKARVAF*APMTPPDTGASVNPSPFSRA 147
+W+ AP+ G R+ + L PP A P PP A PSPF A
Sbjct: 236 RWSRAAPLPPHNGERERPRLVLDPPKRDASAT---PTPPPAEAARSRPSPFGAA 286
>06_03_0912 + 25896152-25896451,25896528-25897296,25897492-25897658,
25898932-25901013,25901155-25901730,25904503-25905648,
25907056-25908693
Length = 2225
Score = 27.9 bits (59), Expect = 3.4
Identities = 19/89 (21%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Frame = -3
Query: 261 PFEVFFTTSGHEGQGSVLSTHDSSRYRCI--CESQPFL*GYREDLFGNIRIYCTRIDQKR 88
P++ + H GQG+ + H+ + + I +S+ + G R+ L + T +D+
Sbjct: 1161 PYDQYTEGCSHSGQGTAIPPHEHAMQKSIPRLKSKLHIEGSRDQLRQWTELLSTHLDELT 1220
Query: 87 SFFRMSHNAIFAQVH---VEHDFIAGQYG 10
+ +N+ + + EHD + YG
Sbjct: 1221 ITDPLFYNSKYLEEESTVSEHDSLESIYG 1249
>11_06_0215 - 21332429-21333037,21333605-21333649
Length = 217
Score = 27.5 bits (58), Expect = 4.5
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = -1
Query: 359 PINMLLVSLATCPEPICPQ--WNCLAPITLRRGRDLSKSSLRPPAMKAR 219
PIN+ T P P CP + ++ +R RD+ S R P K+R
Sbjct: 76 PINIAKEDSDTLPSPTCPDNFSPGTSRVSKKRPRDVKSPSKRQPKPKSR 124
>10_08_0633 +
19446075-19446488,19446607-19446975,19447961-19448054,
19448137-19448174,19448770-19448916,19449580-19449679,
19449786-19450744,19451143-19451295
Length = 757
Score = 27.5 bits (58), Expect = 4.5
Identities = 19/66 (28%), Positives = 29/66 (43%)
Frame = +1
Query: 43 VYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGAQNATL 222
V +G DG+V G L D + +VP I P + L +T GV +A +
Sbjct: 295 VCVGGDGIVNEVLNGLLCRDDQNVAVSVPIGIIPAGSDNSLVWTVL----GVKDPISAAM 350
Query: 223 AFMAGG 240
+ + GG
Sbjct: 351 SIVRGG 356
>08_02_0707 - 20212190-20214592
Length = 800
Score = 27.5 bits (58), Expect = 4.5
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 411 SHFNAHVHALSCSHSGDAHQHVIGQFSH 328
SH ++H H+ S SHS +H HV G H
Sbjct: 497 SHSHSHSHSHSHSHS-HSHSHVHGHEDH 523
>01_01_1099 -
8700627-8700710,8701148-8701200,8701287-8701344,
8701886-8702032,8702386-8702448,8702559-8702630,
8703154-8703234,8703312-8703362,8703519-8703615,
8704154-8704384,8704882-8705142,8705231-8705394,
8705547-8705586,8707223-8707323
Length = 500
Score = 27.5 bits (58), Expect = 4.5
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = -1
Query: 410 PILMPMFMHSAVAIPVMPINMLLVSL 333
PILMP+ + S + +P +PIN+LL ++
Sbjct: 161 PILMPIDL-SLIDVPRLPINLLLTTV 185
>05_04_0038 +
17403620-17403769,17403975-17404038,17404807-17404865,
17404981-17405056,17405196-17405267,17405411-17405498,
17405617-17405872,17405972-17406087,17406757-17406977,
17407074-17407102,17407192-17407291,17407405-17407492,
17407640-17407874
Length = 517
Score = 27.1 bits (57), Expect = 5.9
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +2
Query: 200 WVLRTLPWPSWPEVVKKT--SKGPFLSSK*WELSSSTAD 310
W+L L + +PE +KK S+ PF S+ EL ++ D
Sbjct: 294 WILHPLVFGDYPETIKKVVGSRLPFFSNHESELVTNAFD 332
>04_04_1575 + 34548774-34549109,34549979-34550185
Length = 180
Score = 27.1 bits (57), Expect = 5.9
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 39 RRVPGQRWRCGSCEKRIASDRFEYNRSECSQTDLP 143
RR+ R RCG+ + I FE +E Q+DLP
Sbjct: 56 RRIASARVRCGAAVRFIGQSEFE---AEVLQSDLP 87
>03_02_0712 -
10600147-10600196,10600257-10600378,10600993-10601489,
10601663-10601851,10601936-10602099,10602193-10602446,
10602535-10602691,10602830-10602995,10603121-10603227,
10603305-10603478,10603594-10603689,10603781-10603862,
10603948-10604058,10604253-10604309,10604638-10604709,
10604799-10605041,10605195-10605341,10605381-10605616,
10605745-10605865
Length = 1014
Score = 27.1 bits (57), Expect = 5.9
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -3
Query: 201 HDSSRYRCICESQPFL*GYREDLFGNIRIYC 109
H +S Y + E L +DL G+IR+YC
Sbjct: 365 HAASGYHIVLEENRKLYNQVQDLKGSIRVYC 395
>02_05_0308 -
27754340-27754634,27755591-27755696,27755781-27755855,
27756039-27757410
Length = 615
Score = 27.1 bits (57), Expect = 5.9
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = -1
Query: 194 PPDTGASVNPSPFSRAIGKICLG-TFGSIVLESIRSDPFFA*ATTPSLPRYTSSTTLLLV 18
PP T S P+P R I + L ++ S RS A PSLP + + L L+
Sbjct: 7 PPPTPTSAAPAPCPRQIAAVVLNHPSSALTPASTRSLSASLLAVAPSLPTPVADSVLKLL 66
>02_01_0447 -
3220489-3220560,3221287-3221420,3221500-3221731,
3221817-3222015,3222101-3222181,3222260-3222315,
3222493-3222623,3222700-3222847,3224151-3224321,
3224417-3224775,3224898-3225189
Length = 624
Score = 27.1 bits (57), Expect = 5.9
Identities = 20/70 (28%), Positives = 35/70 (50%)
Frame = +1
Query: 4 VVSILTSNKVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAP 183
V S + +NKVV D+Y KD V+ H ++ + S+ + K + + L GL F +
Sbjct: 266 VFSKIKNNKVVFDIYRCKD-VIRHLER-PIRKRSAVLQILPLKDLVAVVLCSGLSFLLSR 323
Query: 184 VSGGVMGAQN 213
V+ ++ N
Sbjct: 324 VTNKMISILN 333
>09_04_0539 - 18416184-18416830,18417983-18419057
Length = 573
Score = 26.6 bits (56), Expect = 7.8
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -1
Query: 356 INMLLVSLATCPEPICPQWNCLAPITLRRGRDLSK 252
+N + S+A P P P N AP + +GR L +
Sbjct: 8 VNSAVESVAESPAPASPASNPTAPAAVTKGRGLRR 42
>07_01_1120 - 10338265-10338624,10338739-10338873,10339411-10340451
Length = 511
Score = 26.6 bits (56), Expect = 7.8
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -1
Query: 287 PITLRRGRDLSKSSLRPPAMKARVAF*APMTPPDTGA 177
P+T +RGR+ KS P + R A PP GA
Sbjct: 12 PLTRKRGREARKSKEAAPPREPRRARSRSHVPPPPGA 48
>04_04_0179 -
23342764-23342973,23343185-23343340,23343535-23343593,
23344150-23344226,23344309-23344587,23344800-23344885,
23344960-23345027,23345721-23345904,23346071-23346204,
23346776-23347039,23347613-23347677,23347833-23348407,
23348501-23348680,23348765-23348928,23349008-23349261,
23349405-23349562,23349808-23349948,23350176-23350282,
23350651-23350737,23350812-23350901,23350974-23351055,
23351370-23351561,23351748-23351816,23351959-23352294,
23352694-23352837,23352963-23353126,23353817-23353883
Length = 1463
Score = 26.6 bits (56), Expect = 7.8
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -3
Query: 216 SVLSTHDSSRYRCICESQPFL*GYREDLFGNIRIYC 109
S H+ + Y + E L +DL G+IR+YC
Sbjct: 353 SYFEAHNHNAYHKLLEENRKLYNQVQDLKGSIRVYC 388
>03_06_0711 - 35682293-35682952
Length = 219
Score = 26.6 bits (56), Expect = 7.8
Identities = 21/83 (25%), Positives = 29/83 (34%)
Frame = -1
Query: 407 ILMPMFMHSAVAIPVMPINMLLVSLATCPEPICPQWNCLAPITLRRGRDLSKSSLRPPAM 228
+L P+ + I + P + S E + P LAP S ++L PPA
Sbjct: 17 LLAPLLASAESPISLPPASAPTASTPAADERLHPADAALAPSQPPSEASSSAAALSPPAP 76
Query: 227 KARVAF*APMTPPDTGASVNPSP 159
AP P S P P
Sbjct: 77 PETSPLPAPSHSPPVPHSAAPEP 99
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,623,736
Number of Sequences: 37544
Number of extensions: 312592
Number of successful extensions: 1023
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1019
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 742607976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -