Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9a13
(413 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC032324-1|AAH32324.1| 336|Homo sapiens 3-hydroxyisobutyrate de... 130 1e-30
AF529362-1|AAQ09596.1| 336|Homo sapiens NS5ATP1 protein. 130 1e-30
AB050000-1|BAF42045.1| 336|Homo sapiens 3'-hydroxyisobutyrate d... 130 1e-30
BC064940-1|AAH64940.1| 484|Homo sapiens N-PAC protein protein. 62 5e-10
BC047223-1|AAH47223.1| 553|Homo sapiens cytokine-like nuclear f... 62 5e-10
BC032855-1|AAH32855.1| 553|Homo sapiens cytokine-like nuclear f... 62 5e-10
BC003693-1|AAH03693.1| 523|Homo sapiens Similar to RIKEN cDNA 3... 62 5e-10
AY352585-1|AAQ57265.1| 553|Homo sapiens cytokine-like nuclear f... 62 5e-10
AF326966-1|AAK15524.1| 547|Homo sapiens cytokine-like nuclear f... 62 5e-10
AF244907-1|AAQ14242.1| 553|Homo sapiens 3-hydroxyisobutyrate de... 62 5e-10
BC096272-1|AAH96272.1| 560|Homo sapiens HIV-1 Rev binding prote... 33 0.38
AB025027-1|BAB85656.1| 565|Homo sapiens brain carboxylesterase ... 31 1.5
AK024112-1|BAB14829.1| 305|Homo sapiens protein ( Homo sapiens ... 30 2.6
AB209603-1|BAD92840.1| 337|Homo sapiens amyloid beta (A4) precu... 30 3.5
AB037830-1|BAA92647.2| 2461|Homo sapiens KIAA1409 protein protein. 29 4.6
X89478-1|CAA61667.1| 562|Homo sapiens nucleoporin-like protein ... 29 6.1
L42025-1|AAC37580.1| 562|Homo sapiens RAB protein. 29 6.1
BC129996-1|AAI29997.1| 569|Homo sapiens arylsulfatase family, m... 29 6.1
BC129995-1|AAI29996.1| 569|Homo sapiens arylsulfatase family, m... 29 6.1
BC117683-1|AAI17684.1| 113|Homo sapiens NAV1 protein protein. 29 6.1
BC096275-1|AAH96275.1| 562|Homo sapiens HIV-1 Rev binding prote... 29 6.1
BC096274-1|AAH96274.1| 522|Homo sapiens HRB protein protein. 29 6.1
BC096273-1|AAH96273.1| 562|Homo sapiens HIV-1 Rev binding prote... 29 6.1
BC041447-1|AAH41447.1| 468|Homo sapiens Similar to glutamate re... 29 6.1
BC030592-1|AAH30592.1| 562|Homo sapiens HIV-1 Rev binding prote... 29 6.1
AY875937-1|AAW66665.1| 569|Homo sapiens arylsulfatase I protein. 29 6.1
AC105286-1|AAX93270.1| 506|Homo sapiens unknown protein. 29 6.1
AL109966-5|CAI21950.1| 476|Homo sapiens zinc finger protein 697... 29 8.1
>BC032324-1|AAH32324.1| 336|Homo sapiens 3-hydroxyisobutyrate
dehydrogenase protein.
Length = 336
Score = 130 bits (315), Expect = 1e-30
Identities = 61/136 (44%), Positives = 92/136 (67%)
Frame = +1
Query: 4 VVSILTSNKVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAP 183
++++L ++ ++ Y G +G++ KKGSLLIDSSTIDP V K++ + G F DAP
Sbjct: 99 IITMLPTSINAIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVFMDAP 158
Query: 184 VSGGVMGAQNATLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGI 363
VSGGV A++ L FM GG +++F + LL MG+ +CG +G+GQ AK+ NNML+ I
Sbjct: 159 VSGGVGAARSGNLTFMVGGVEDEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAI 218
Query: 364 TGMATAECMNMGIKMG 411
+ + TAE MN+GI++G
Sbjct: 219 SMIGTAEAMNLGIRLG 234
>AF529362-1|AAQ09596.1| 336|Homo sapiens NS5ATP1 protein.
Length = 336
Score = 130 bits (315), Expect = 1e-30
Identities = 61/136 (44%), Positives = 92/136 (67%)
Frame = +1
Query: 4 VVSILTSNKVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAP 183
++++L ++ ++ Y G +G++ KKGSLLIDSSTIDP V K++ + G F DAP
Sbjct: 99 IITMLPTSINAIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVFMDAP 158
Query: 184 VSGGVMGAQNATLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGI 363
VSGGV A++ L FM GG +++F + LL MG+ +CG +G+GQ AK+ NNML+ I
Sbjct: 159 VSGGVGAARSGNLTFMVGGVEDEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAI 218
Query: 364 TGMATAECMNMGIKMG 411
+ + TAE MN+GI++G
Sbjct: 219 SMIGTAEAMNLGIRLG 234
>AB050000-1|BAF42045.1| 336|Homo sapiens 3'-hydroxyisobutyrate
dehydrogenase protein.
Length = 336
Score = 130 bits (315), Expect = 1e-30
Identities = 61/136 (44%), Positives = 92/136 (67%)
Frame = +1
Query: 4 VVSILTSNKVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAP 183
++++L ++ ++ Y G +G++ KKGSLLIDSSTIDP V K++ + G F DAP
Sbjct: 99 IITMLPTSINAIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVFMDAP 158
Query: 184 VSGGVMGAQNATLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGI 363
VSGGV A++ L FM GG +++F + LL MG+ +CG +G+GQ AK+ NNML+ I
Sbjct: 159 VSGGVGAARSGNLTFMVGGVEDEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAI 218
Query: 364 TGMATAECMNMGIKMG 411
+ + TAE MN+GI++G
Sbjct: 219 SMIGTAEAMNLGIRLG 234
>BC064940-1|AAH64940.1| 484|Homo sapiens N-PAC protein protein.
Length = 484
Score = 62.5 bits (145), Expect = 5e-10
Identities = 34/126 (26%), Positives = 61/126 (48%)
Frame = +1
Query: 1 VVVSILTSNKVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDA 180
+ + ++ K D+ LG GV+ + G +D ST+D + ++ + + +G F +A
Sbjct: 257 ITFACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEA 316
Query: 181 PVSGGVMGAQNATLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMG 360
PVSG + + L +A G + +E + MG F G++G+ L NM+ G
Sbjct: 317 PVSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQG 376
Query: 361 ITGMAT 378
+ MAT
Sbjct: 377 -SFMAT 381
>BC047223-1|AAH47223.1| 553|Homo sapiens cytokine-like nuclear
factor n-pac protein.
Length = 553
Score = 62.5 bits (145), Expect = 5e-10
Identities = 34/126 (26%), Positives = 61/126 (48%)
Frame = +1
Query: 1 VVVSILTSNKVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDA 180
+ + ++ K D+ LG GV+ + G +D ST+D + ++ + + +G F +A
Sbjct: 326 ITFACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEA 385
Query: 181 PVSGGVMGAQNATLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMG 360
PVSG + + L +A G + +E + MG F G++G+ L NM+ G
Sbjct: 386 PVSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQTMGKTSFFLGEVGNAAKMMLIVNMVQG 445
Query: 361 ITGMAT 378
+ MAT
Sbjct: 446 -SFMAT 450
>BC032855-1|AAH32855.1| 553|Homo sapiens cytokine-like nuclear
factor n-pac protein.
Length = 553
Score = 62.5 bits (145), Expect = 5e-10
Identities = 34/126 (26%), Positives = 61/126 (48%)
Frame = +1
Query: 1 VVVSILTSNKVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDA 180
+ + ++ K D+ LG GV+ + G +D ST+D + ++ + + +G F +A
Sbjct: 326 ITFACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEA 385
Query: 181 PVSGGVMGAQNATLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMG 360
PVSG + + L +A G + +E + MG F G++G+ L NM+ G
Sbjct: 386 PVSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQG 445
Query: 361 ITGMAT 378
+ MAT
Sbjct: 446 -SFMAT 450
>BC003693-1|AAH03693.1| 523|Homo sapiens Similar to RIKEN cDNA
3930401K13 gene protein.
Length = 523
Score = 62.5 bits (145), Expect = 5e-10
Identities = 34/126 (26%), Positives = 61/126 (48%)
Frame = +1
Query: 1 VVVSILTSNKVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDA 180
+ + ++ K D+ LG GV+ + G +D ST+D + ++ + + +G F +A
Sbjct: 296 ITFACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEA 355
Query: 181 PVSGGVMGAQNATLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMG 360
PVSG + + L +A G + +E + MG F G++G+ L NM+ G
Sbjct: 356 PVSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQG 415
Query: 361 ITGMAT 378
+ MAT
Sbjct: 416 -SFMAT 420
>AY352585-1|AAQ57265.1| 553|Homo sapiens cytokine-like nuclear
factor n-pac-like protein protein.
Length = 553
Score = 62.5 bits (145), Expect = 5e-10
Identities = 34/126 (26%), Positives = 61/126 (48%)
Frame = +1
Query: 1 VVVSILTSNKVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDA 180
+ + ++ K D+ LG GV+ + G +D ST+D + ++ + + +G F +A
Sbjct: 326 ITFACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEA 385
Query: 181 PVSGGVMGAQNATLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMG 360
PVSG + + L +A G + +E + MG F G++G+ L NM+ G
Sbjct: 386 PVSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQG 445
Query: 361 ITGMAT 378
+ MAT
Sbjct: 446 -SFMAT 450
>AF326966-1|AAK15524.1| 547|Homo sapiens cytokine-like nuclear
factor n-pac protein.
Length = 547
Score = 62.5 bits (145), Expect = 5e-10
Identities = 34/126 (26%), Positives = 61/126 (48%)
Frame = +1
Query: 1 VVVSILTSNKVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDA 180
+ + ++ K D+ LG GV+ + G +D ST+D + ++ + + +G F +A
Sbjct: 320 ITFACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEA 379
Query: 181 PVSGGVMGAQNATLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMG 360
PVSG + + L +A G + +E + MG F G++G+ L NM+ G
Sbjct: 380 PVSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQG 439
Query: 361 ITGMAT 378
+ MAT
Sbjct: 440 -SFMAT 444
>AF244907-1|AAQ14242.1| 553|Homo sapiens 3-hydroxyisobutyrate
dehydrogenase-like protein HIBDL protein.
Length = 553
Score = 62.5 bits (145), Expect = 5e-10
Identities = 34/126 (26%), Positives = 61/126 (48%)
Frame = +1
Query: 1 VVVSILTSNKVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDA 180
+ + ++ K D+ LG GV+ + G +D ST+D + ++ + + +G F +A
Sbjct: 326 ITFACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEA 385
Query: 181 PVSGGVMGAQNATLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMG 360
PVSG + + L +A G + +E + MG F G++G+ L NM+ G
Sbjct: 386 PVSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQG 445
Query: 361 ITGMAT 378
+ MAT
Sbjct: 446 -SFMAT 450
>BC096272-1|AAH96272.1| 560|Homo sapiens HIV-1 Rev binding protein
protein.
Length = 560
Score = 33.1 bits (72), Expect = 0.38
Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = -1
Query: 248 SLRPPAMKARVAF*APMTPPDTGASVNPSPFSRAIG--KICLGTFGSIVLESIRSDPFFA 75
S + PA A+ AF P T S P+ F+ A G K + FG + + S+PF
Sbjct: 489 SFQQPAFPAQAAF-----PQQTAFSQQPNGFA-AFGQTKPVVTPFGQVAAAGVSSNPFMT 542
Query: 74 *ATTPSLPRYTSSTTLLL 21
A T P +SST L
Sbjct: 543 GAPTGQFPTGSSSTNPFL 560
>AB025027-1|BAB85656.1| 565|Homo sapiens brain carboxylesterase
hBr2 protein.
Length = 565
Score = 31.1 bits (67), Expect = 1.5
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1
Query: 79 KKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPV 186
K S L+ S N+P+++ P+A EK LG TD PV
Sbjct: 374 KTASSLLWKSYPIANIPEELTPLASEKYLGGTDDPV 409
>AK024112-1|BAB14829.1| 305|Homo sapiens protein ( Homo sapiens
cDNA FLJ14050 fis, clone HEMBA1006796. ).
Length = 305
Score = 30.3 bits (65), Expect = 2.6
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 156 ERAGIHRCTCIWRSHGCSERYPGLHG 233
E+ G+HR TC +R GC+ PG G
Sbjct: 118 EQPGLHRATCGFRGLGCAPGCPGSGG 143
>AB209603-1|BAD92840.1| 337|Homo sapiens amyloid beta (A4)
precursor protein-binding, family A, member 3 variant
protein.
Length = 337
Score = 29.9 bits (64), Expect = 3.5
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = -1
Query: 323 PEPICPQWNCLAPITLRRGRDLSKSSLRPPAMKARVAF*APMTPPDTGASVNPSPFSRAI 144
P P+ P W A ++ + S RPP R A + + P GAS + + R++
Sbjct: 195 PRPLAPGWGGRAALSTAPEQPPPLS--RPPLFSPRSAASSVVASPSVGASASATASLRSM 252
Query: 143 GKI 135
G++
Sbjct: 253 GRV 255
>AB037830-1|BAA92647.2| 2461|Homo sapiens KIAA1409 protein protein.
Length = 2461
Score = 29.5 bits (63), Expect = 4.6
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = -1
Query: 323 PEPICPQWNCLAPITLRRGRDLSKSSLRPPAM 228
PE + P+++C +P+TL++ RDL + S P M
Sbjct: 1555 PEEL-PEFSCGSPLTLKQKRDLLQKSFALPEM 1585
>X89478-1|CAA61667.1| 562|Homo sapiens nucleoporin-like protein
protein.
Length = 562
Score = 29.1 bits (62), Expect = 6.1
Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Frame = -1
Query: 248 SLRPPAMKARVAF*APMTPPDTGASVNPSPFS-RAIG--KICLGTFGSIVLESIRSDPFF 78
S + PA A+ AF P T S P+ A G K + FG + + S+PF
Sbjct: 489 SFQQPAFPAQAAF-----PQQTAFSQQPNGAGFAAFGQTKPVVTPFGQVAAAGVSSNPFM 543
Query: 77 A*ATTPSLPRYTSSTTLLL 21
A T P +SST L
Sbjct: 544 TGAPTGQFPTGSSSTNPFL 562
>L42025-1|AAC37580.1| 562|Homo sapiens RAB protein.
Length = 562
Score = 29.1 bits (62), Expect = 6.1
Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Frame = -1
Query: 248 SLRPPAMKARVAF*APMTPPDTGASVNPSPFS-RAIG--KICLGTFGSIVLESIRSDPFF 78
S + PA A+ AF P T S P+ A G K + FG + + S+PF
Sbjct: 489 SFQQPAFPAQAAF-----PQQTAFSQQPNGAGFAAFGQTKPVVTPFGQVAAAGVSSNPFM 543
Query: 77 A*ATTPSLPRYTSSTTLLL 21
A T P +SST L
Sbjct: 544 TGAPTGQFPTGSSSTNPFL 562
>BC129996-1|AAI29997.1| 569|Homo sapiens arylsulfatase family,
member I protein.
Length = 569
Score = 29.1 bits (62), Expect = 6.1
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -2
Query: 127 EHSDLLYSNRSEAILFSHEPQRHL 56
++S +LY+ R+ IL SH PQR L
Sbjct: 206 QYSTMLYAQRASHILASHSPQRPL 229
>BC129995-1|AAI29996.1| 569|Homo sapiens arylsulfatase family,
member I protein.
Length = 569
Score = 29.1 bits (62), Expect = 6.1
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -2
Query: 127 EHSDLLYSNRSEAILFSHEPQRHL 56
++S +LY+ R+ IL SH PQR L
Sbjct: 206 QYSTMLYAQRASHILASHSPQRPL 229
>BC117683-1|AAI17684.1| 113|Homo sapiens NAV1 protein protein.
Length = 113
Score = 29.1 bits (62), Expect = 6.1
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = +2
Query: 161 GWDSQMHLYLEE--SWVLRTLPWPSWPEVVKKTSKGPFLSSK*WELSSSTADRSAQD 325
GWD E+ WV TLPWPS + K P + ++S DR+ +D
Sbjct: 15 GWDPDTKAAWEDPVEWVRDTLPWPSAQQDQSKLYHLPPPTVGPHSIASPPEDRTVKD 71
>BC096275-1|AAH96275.1| 562|Homo sapiens HIV-1 Rev binding protein
protein.
Length = 562
Score = 29.1 bits (62), Expect = 6.1
Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Frame = -1
Query: 248 SLRPPAMKARVAF*APMTPPDTGASVNPSPFS-RAIG--KICLGTFGSIVLESIRSDPFF 78
S + PA A+ AF P T S P+ A G K + FG + + S+PF
Sbjct: 489 SFQQPAFPAQAAF-----PQQTAFSQQPNGAGFAAFGQTKPVVTPFGQVAAAGVSSNPFM 543
Query: 77 A*ATTPSLPRYTSSTTLLL 21
A T P +SST L
Sbjct: 544 TGAPTGQFPTGSSSTNPFL 562
>BC096274-1|AAH96274.1| 522|Homo sapiens HRB protein protein.
Length = 522
Score = 29.1 bits (62), Expect = 6.1
Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Frame = -1
Query: 248 SLRPPAMKARVAF*APMTPPDTGASVNPSPFS-RAIG--KICLGTFGSIVLESIRSDPFF 78
S + PA A+ AF P T S P+ A G K + FG + + S+PF
Sbjct: 449 SFQQPAFPAQAAF-----PQQTAFSQQPNGAGFAAFGQTKPVVTPFGQVAAAGVSSNPFM 503
Query: 77 A*ATTPSLPRYTSSTTLLL 21
A T P +SST L
Sbjct: 504 TGAPTGQFPTGSSSTNPFL 522
>BC096273-1|AAH96273.1| 562|Homo sapiens HIV-1 Rev binding protein
protein.
Length = 562
Score = 29.1 bits (62), Expect = 6.1
Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Frame = -1
Query: 248 SLRPPAMKARVAF*APMTPPDTGASVNPSPFS-RAIG--KICLGTFGSIVLESIRSDPFF 78
S + PA A+ AF P T S P+ A G K + FG + + S+PF
Sbjct: 489 SFQQPAFPAQAAF-----PQQTAFSQQPNGAGFAAFGQTKPVVTPFGQVAAAGVSSNPFM 543
Query: 77 A*ATTPSLPRYTSSTTLLL 21
A T P +SST L
Sbjct: 544 TGAPTGQFPTGSSSTNPFL 562
>BC041447-1|AAH41447.1| 468|Homo sapiens Similar to glutamate
receptor, metabotropic 2 protein.
Length = 468
Score = 29.1 bits (62), Expect = 6.1
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = -1
Query: 275 RRGRDLSKSSLRPPAMKARVAF*APMTPPDTGASVNPSPFSRAIGKICLGTF 120
R G S+ L +++AR + AP P DT V F IG+ + T+
Sbjct: 3 RAGAGASRPPLHSDSLRARASAPAPFRPADTHNEVRFDRFGDGIGRYNIFTY 54
>BC030592-1|AAH30592.1| 562|Homo sapiens HIV-1 Rev binding protein
protein.
Length = 562
Score = 29.1 bits (62), Expect = 6.1
Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Frame = -1
Query: 248 SLRPPAMKARVAF*APMTPPDTGASVNPSPFS-RAIG--KICLGTFGSIVLESIRSDPFF 78
S + PA A+ AF P T S P+ A G K + FG + + S+PF
Sbjct: 489 SFQQPAFPAQAAF-----PQQTAFSQQPNGAGFAAFGQTKPVVTPFGQVAAAGVSSNPFM 543
Query: 77 A*ATTPSLPRYTSSTTLLL 21
A T P +SST L
Sbjct: 544 TGAPTGQFPTGSSSTNPFL 562
>AY875937-1|AAW66665.1| 569|Homo sapiens arylsulfatase I protein.
Length = 569
Score = 29.1 bits (62), Expect = 6.1
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -2
Query: 127 EHSDLLYSNRSEAILFSHEPQRHL 56
++S +LY+ R+ IL SH PQR L
Sbjct: 206 QYSTMLYAQRASHILASHSPQRPL 229
>AC105286-1|AAX93270.1| 506|Homo sapiens unknown protein.
Length = 506
Score = 29.1 bits (62), Expect = 6.1
Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Frame = -1
Query: 248 SLRPPAMKARVAF*APMTPPDTGASVNPSPFS-RAIG--KICLGTFGSIVLESIRSDPFF 78
S + PA A+ AF P T S P+ A G K + FG + + S+PF
Sbjct: 433 SFQQPAFPAQAAF-----PQQTAFSQQPNGAGFAAFGQTKPVVTPFGQVAAAGVSSNPFM 487
Query: 77 A*ATTPSLPRYTSSTTLLL 21
A T P +SST L
Sbjct: 488 TGAPTGQFPTGSSSTNPFL 506
>AL109966-5|CAI21950.1| 476|Homo sapiens zinc finger protein 697
protein.
Length = 476
Score = 28.7 bits (61), Expect = 8.1
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = +1
Query: 193 GVMGAQNATLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSG--QVAKLTNNMLMGIT 366
G+ G +A + M G F PL + K F CG+ G G + LTN++ + T
Sbjct: 157 GLAGECDAMVGMMGVGVAGGFGAGPPLARPPREKPFRCGECGKGFSRNTYLTNHLRLH-T 215
Query: 367 GMATAECMNMG 399
G C + G
Sbjct: 216 GERPNLCADCG 226
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,272,236
Number of Sequences: 237096
Number of extensions: 1692806
Number of successful extensions: 8861
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 8640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8861
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3087725076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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