Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9a13
         (413 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   2.4  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   4.2  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   4.2  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   5.5  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    21   7.3  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    21   7.3  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 243  TTSGHEGQGSVLSTHDS 193
            T SGH G G +L+ +D+
Sbjct: 1927 TGSGHGGHGGLLTPYDT 1943


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 62  PSLPRYTSSTTLLLVNMETT 3
           P +P Y+SS  + L N+E T
Sbjct: 273 PHVPEYSSSIIMELHNIEGT 292


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 62  PSLPRYTSSTTLLLVNMETT 3
           P +P Y+SS  + L N+E T
Sbjct: 288 PHVPEYSSSIIMELHNIEGT 307


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 9/35 (25%), Positives = 16/35 (45%)
 Frame = -1

Query: 263 DLSKSSLRPPAMKARVAF*APMTPPDTGASVNPSP 159
           D ++  + P  ++AR        PP     +NP+P
Sbjct: 191 DFTRDKVAPILVRARETPNYTACPPTLACPLNPNP 225


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 191 PDTGASVNPSPFS 153
           PDT + +NP  FS
Sbjct: 52  PDTASLINPGNFS 64


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 191 PDTGASVNPSPFS 153
           PDT + +NP  FS
Sbjct: 52  PDTASLINPGNFS 64


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,205
Number of Sequences: 438
Number of extensions: 3152
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10503195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)