Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9a08
         (715 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    26   0.35 
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    26   0.35 
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           25   0.61 
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       22   5.7  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    22   5.7  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    22   5.7  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   7.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.5  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   9.9  

>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 25.8 bits (54), Expect = 0.35
 Identities = 11/45 (24%), Positives = 26/45 (57%)
 Frame = +3

Query: 129 YNISSHLYRYSTTSEAIEQNEQVIIDDSDVAQAKEEEINKKRNIS 263
           ++ + HL +Y T  + I    + +I+++ + Q  E +++KK + S
Sbjct: 80  HDFTQHLSQYDTCQQGIYPENKTLINETSL-QLDENKLDKKNDDS 123


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 25.8 bits (54), Expect = 0.35
 Identities = 11/45 (24%), Positives = 26/45 (57%)
 Frame = +3

Query: 129 YNISSHLYRYSTTSEAIEQNEQVIIDDSDVAQAKEEEINKKRNIS 263
           ++ + HL +Y T  + I    + +I+++ + Q  E +++KK + S
Sbjct: 80  HDFTQHLSQYDTCQQGIYPENKTLINETSL-QLDENKLDKKNDDS 123


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 25.0 bits (52), Expect = 0.61
 Identities = 10/41 (24%), Positives = 24/41 (58%)
 Frame = +3

Query: 129 YNISSHLYRYSTTSEAIEQNEQVIIDDSDVAQAKEEEINKK 251
           ++ + HL +Y T  + I    + +I+++ + Q  E +++KK
Sbjct: 80  HDFTQHLSQYDTCQQGIYPENKTLINETSL-QLDENKLDKK 119


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/37 (24%), Positives = 19/37 (51%)
 Frame = +3

Query: 564 KLEMWKKELRNKVAKKTAEAQAAKDKKERLVEEVRRH 674
           ++++W +  R K+ K+    +   ++  R  EE  RH
Sbjct: 49  QIKIWFQNRRMKLKKELRAVKEINEQARREREEQERH 85


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/37 (24%), Positives = 19/37 (51%)
 Frame = +3

Query: 564 KLEMWKKELRNKVAKKTAEAQAAKDKKERLVEEVRRH 674
           ++++W +  R K+ K+    +   ++  R  EE  RH
Sbjct: 200 QIKIWFQNRRMKLKKELRAVKEINEQARREREEQERH 236


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/37 (24%), Positives = 19/37 (51%)
 Frame = +3

Query: 564 KLEMWKKELRNKVAKKTAEAQAAKDKKERLVEEVRRH 674
           ++++W +  R K+ K+    +   ++  R  EE  RH
Sbjct: 259 QIKIWFQNRRMKLKKELRAVKEINEQARREREEQERH 295


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +2

Query: 488 DNQAETSS*RGKDTEERSGNCSQNGKIRD 574
           DN+  TSS    +T   S N    G ++D
Sbjct: 395 DNRNNTSSRAQGETSRNSKNSGNGGGVQD 423


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 557  FGYNFLISLQYLFL 516
            FG NFLI  Q +FL
Sbjct: 1330 FGLNFLIITQAMFL 1343


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -3

Query: 215 IAVVNNYLFILFNCF 171
           ++ + NY   L+NCF
Sbjct: 135 LSFIENYCQFLYNCF 149


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,853
Number of Sequences: 336
Number of extensions: 3430
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)