Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9a08
(715 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 38 0.001
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 36 0.006
SPBC409.12c |||nuclear telomere cap complex subunit Stn1|Schizos... 35 0.013
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 34 0.018
SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr 1||... 32 0.094
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 32 0.094
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 31 0.16
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 31 0.16
SPBC26H8.08c |grn1||GTPase Grn1 |Schizosaccharomyces pombe|chr 2... 31 0.16
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 31 0.22
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 30 0.29
SPAC8C9.07 |||rRNA processing protein Fyv7 |Schizosaccharomyces ... 29 0.87
SPBC14F5.08 |med7||mediator complex subunit Med7|Schizosaccharom... 28 1.2
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 28 1.5
SPBC365.07c |||TATA element modulatory factor homolog |Schizosac... 28 1.5
SPCC1620.11 |mug87||nucleoporin Nic96 homolog|Schizosaccharomyce... 28 1.5
SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein Klp6|S... 28 1.5
SPAC17G6.07c |||SNARE Slt1 |Schizosaccharomyces pombe|chr 1|||Ma... 28 1.5
SPBC21C3.02c |sds3||Sds3-like family protein|Schizosaccharomyces... 28 1.5
SPBC1105.08 |||EMP70 family|Schizosaccharomyces pombe|chr 2|||Ma... 27 2.0
SPBC1289.14 ||SPBC8E4.10c|adducin|Schizosaccharomyces pombe|chr ... 27 2.0
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 27 2.7
SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces pom... 27 2.7
SPBC119.15 |||AAA family ATPase, unknown biological role|Schizos... 27 3.5
SPBC30B4.02c |||R3H and G-patch domain, unknown biological role|... 27 3.5
SPBC32H8.13c |mok12||alpha-1,3-glucan synthase Mok12|Schizosacch... 27 3.5
SPAC31G5.18c |||ubiquitin family, human C1ORF55 related|Schizosa... 26 4.7
SPAC926.04c |hsp90|swo1|heat shock protein Hsp90|Schizosaccharom... 26 4.7
SPCC4B3.12 |set9||histone lysine methyltransferase Set9|Schizosa... 26 4.7
SPBC17D11.05 |tif32||translation initiation factor eIF3a|Schizos... 26 4.7
SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1 |Schizosaccharo... 26 4.7
SPAC29B12.02c |set2||histone lysine methyltransferase Set2 |Schi... 26 6.1
SPAC1952.11c |ure2||urease |Schizosaccharomyces pombe|chr 1|||Ma... 26 6.1
SPBC19C7.11 |||ClC chloride channel |Schizosaccharomyces pombe|c... 26 6.1
SPBC776.16 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 6.1
SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces pom... 25 8.1
SPAC6B12.05c |||chromatin remodeling complex subunit |Schizosacc... 25 8.1
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 25 8.1
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 38.3 bits (85), Expect = 0.001
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Frame = +3
Query: 432 EKLEYESEAYPFTIQEMMETTRQKRL-AEEEKILKRDQEIVAKMAKLEMWKKELRNKVAK 608
E L +SEA ++E+ E T+Q RL A+ E I K + E +++ +L + E +K+ +
Sbjct: 44 ESLSRKSEAAESQLEELEEETKQLRLKADNEDIQKTEAEQLSRKVELLEEELETNDKLLR 103
Query: 609 KTAEAQAAKDKK----ERLVEEVRR 671
+T E D K ER V+ + R
Sbjct: 104 ETTEKMRQTDVKAEHFERRVQSLER 128
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 35.9 bits (79), Expect = 0.006
Identities = 26/96 (27%), Positives = 44/96 (45%)
Frame = +3
Query: 420 ADIREKLEYESEAYPFTIQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNK 599
A+ + K E E +A ++ +K E E+ KR+ E AK E K+E K
Sbjct: 613 AEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEENAKREAEEK 672
Query: 600 VAKKTAEAQAAKDKKERLVEEVRRHFGFKLDSRDER 707
AK+ AE A ++ +E++ E + K + +R
Sbjct: 673 -AKREAEENAKREAEEKVKRETEENAKRKAEEEGKR 707
Score = 35.5 bits (78), Expect = 0.008
Identities = 24/82 (29%), Positives = 40/82 (48%)
Frame = +3
Query: 417 RADIREKLEYESEAYPFTIQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRN 596
+A+ + +LE E A ++ +K E E+ KR+ E AK E K+E
Sbjct: 548 KAEEKARLEAEENAKREAEEQAKREAEEKAKREAEEKAKREAEEKAKREAEENAKREAEE 607
Query: 597 KVAKKTAEAQAAKDKKERLVEE 662
K AK+ AE +A ++ +E+ E
Sbjct: 608 K-AKREAEEKAKREAEEKAKRE 628
Score = 34.3 bits (75), Expect = 0.018
Identities = 25/96 (26%), Positives = 44/96 (45%)
Frame = +3
Query: 420 ADIREKLEYESEAYPFTIQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNK 599
A+ + K E E +A + +K E E+ KR+ E AK E K+E K
Sbjct: 581 AEEKAKREAEEKAKREAEENAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEK 640
Query: 600 VAKKTAEAQAAKDKKERLVEEVRRHFGFKLDSRDER 707
AK+ AE +A ++ +E+ E + + + + +R
Sbjct: 641 -AKREAEEKAKREAEEKAKREAEENAKREAEEKAKR 675
Score = 33.5 bits (73), Expect = 0.031
Identities = 24/81 (29%), Positives = 39/81 (48%)
Frame = +3
Query: 420 ADIREKLEYESEAYPFTIQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNK 599
A+ + K E E +A ++ +K E E+ KR+ E AK E K+E K
Sbjct: 565 AEEQAKREAEEKAKREAEEKAKREAEEKAKREAEENAKREAEEKAKREAEEKAKREAEEK 624
Query: 600 VAKKTAEAQAAKDKKERLVEE 662
AK+ AE +A ++ +E+ E
Sbjct: 625 -AKREAEEKAKREAEEKAKRE 644
Score = 30.3 bits (65), Expect = 0.29
Identities = 23/79 (29%), Positives = 39/79 (49%)
Frame = +3
Query: 426 IREKLEYESEAYPFTIQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNKVA 605
I+++++ ++EA E +K E E+ KR+ E AK E K+E K A
Sbjct: 533 IQQRIQEKAEA------EAKRKAEEKARLEAEENAKREAEEQAKREAEEKAKREAEEK-A 585
Query: 606 KKTAEAQAAKDKKERLVEE 662
K+ AE +A ++ +E E
Sbjct: 586 KREAEEKAKREAEENAKRE 604
Score = 28.7 bits (61), Expect = 0.87
Identities = 21/82 (25%), Positives = 37/82 (45%)
Frame = +3
Query: 417 RADIREKLEYESEAYPFTIQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRN 596
+A+ K + E +A + ++ E E+ KR+ E AK E K+E
Sbjct: 540 KAEAEAKRKAEEKARLEAEENAKREAEEQAKREAEEKAKREAEEKAKREAEEKAKREAEE 599
Query: 597 KVAKKTAEAQAAKDKKERLVEE 662
AK+ AE +A ++ +E+ E
Sbjct: 600 N-AKREAEEKAKREAEEKAKRE 620
>SPBC409.12c |||nuclear telomere cap complex subunit
Stn1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 325
Score = 34.7 bits (76), Expect = 0.013
Identities = 16/64 (25%), Positives = 37/64 (57%)
Frame = +3
Query: 171 EAIEQNEQVIIDDSDVAQAKEEEINKKRNISRLSMSHHNLVNGKRPYDYPMSLAHLTVKY 350
E I Q+ + + D +D +A ++ + K+N++++S +HH+++ + +P A +K
Sbjct: 117 ELIAQSFEELRDPNDEWKAWQKRMRYKKNLTKISKNHHSIIRTPKKSYFPKDHAKELLKC 176
Query: 351 NRKM 362
R+M
Sbjct: 177 IRQM 180
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 34.3 bits (75), Expect = 0.018
Identities = 41/185 (22%), Positives = 70/185 (37%), Gaps = 7/185 (3%)
Frame = +3
Query: 174 AIE-QNEQVIIDDSDVAQAKEEEINKKRNISRLSMSHHNLVNGKRPYDYPMSLAHLTVKY 350
AIE N +DDSD+ A EE+ K++ S+ + S +V K+P + A
Sbjct: 290 AIEVANSAFALDDSDLESAYNEELEMKKDTSKPTASTKEVVVEKKPDESRKQAARTLETV 349
Query: 351 NRKMYGKYGSASGVNPSLCWPTRADIREKLEYESEAY------PFTIQEMMETTRQKRLA 512
+ + G + S V S + + EK E + A E+ E T K
Sbjct: 350 SEEQMGSSNAKSKVLTSEPKDSTSVEAEKTETDEPAVGKGASDVSDTAEISEKTEAKNAD 409
Query: 513 EEEKILKRDQEIVAKMAKLEMWKKELRNKVAKKTAEAQAAKDKKERLVEEVRRHFGFKLD 692
E + ++ K +K E K L V +K + K + + + +
Sbjct: 410 SEANLEEKSDVGEEKESKDENNKASLHKDVEEKDTKITNEDTGKTETDVKAKETDSIEAN 469
Query: 693 SRDER 707
+DE+
Sbjct: 470 DKDEK 474
>SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1158
Score = 31.9 bits (69), Expect = 0.094
Identities = 11/35 (31%), Positives = 23/35 (65%)
Frame = +3
Query: 258 ISRLSMSHHNLVNGKRPYDYPMSLAHLTVKYNRKM 362
IS ++ SH N + +RPY +P L+ + V++ +++
Sbjct: 182 ISNIAPSHSNSTSSRRPYIHPAFLSQVAVEFRKRL 216
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 31.9 bits (69), Expect = 0.094
Identities = 17/70 (24%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Frame = +3
Query: 474 QEMMETTRQKRLAEEEKILK---RDQEIVAKMAKLEMWKKELRNKVAKKTAEAQAAKDKK 644
QE + +++ +++ + I + E ++K +KLE + L+NKV++ E A
Sbjct: 954 QEEISNLKEENMSQSQAITSVKSKLDETLSKSSKLEADIEHLKNKVSEVEVERNALLASN 1013
Query: 645 ERLVEEVRRH 674
ERL+++++ +
Sbjct: 1014 ERLMDDLKNN 1023
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 31.1 bits (67), Expect = 0.16
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Frame = +3
Query: 474 QEMMETTRQK--RLAEEEKILKRDQEIVAKMAKLEMWKKE--LRNKVAKKTAEAQAAKDK 641
Q+ +E RQ+ R EE+ LKR+QE K +LE K+E + K +K + Q +
Sbjct: 626 QKALEAKRQEEARKKREEQRLKREQE--KKQQELERQKREEKQKQKEREKKLKKQQQEAD 683
Query: 642 KERLVEEVR 668
+E++ E R
Sbjct: 684 REKMAREQR 692
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 31.1 bits (67), Expect = 0.16
Identities = 12/52 (23%), Positives = 31/52 (59%)
Frame = +3
Query: 516 EEKILKRDQEIVAKMAKLEMWKKELRNKVAKKTAEAQAAKDKKERLVEEVRR 671
E ++LKR++++ ++AKL +L +++ +++ +A + K E +R+
Sbjct: 371 ESQLLKREKQLSEELAKLRSTNAQLTDRITQESKKASFLEQKASEQEEVIRK 422
>SPBC26H8.08c |grn1||GTPase Grn1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 470
Score = 31.1 bits (67), Expect = 0.16
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Frame = +3
Query: 456 AYPFTIQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNKVAKKTAEAQAAK 635
++P+ + + E QKR+ EEEK+ +R V + E E + + K AEA A
Sbjct: 53 SFPYKDKILAEIEEQKRIREEEKLARRASGQVDAAMEEEDAVDENGSLMISKIAEAAQAS 112
Query: 636 ---DKKERLVEE 662
D++E ++EE
Sbjct: 113 NPDDEEEFVMEE 124
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 30.7 bits (66), Expect = 0.22
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 7/162 (4%)
Frame = +3
Query: 207 DSDVAQAKEEEINK----KRNISRLSMSHHN---LVNGKRPYDYPMSLAHLTVKYNRKMY 365
DSDVA + + N+ +I+ LS+S N + + + + L+ + NRK
Sbjct: 7 DSDVAASTSNKGNELCSSSTDITSLSVSSPNESVIHSSHSASEADEYVCKLSYEGNRKKR 66
Query: 366 GKYGSASGVNPSLCWPTRADIREKLEYESEAYPFTIQEMMETTRQKRLAEEEKILKRDQE 545
GSA RA E++ + EA E ++ ++++ E+EK L+ ++
Sbjct: 67 IYNGSAEAGKEKKLQKQRAQ-EERIR-QKEA------ERLKREKERQQREQEKKLREQEK 118
Query: 546 IVAKMAKLEMWKKELRNKVAKKTAEAQAAKDKKERLVEEVRR 671
I AK K E+ K E ++ + +D+K R EE +R
Sbjct: 119 IAAKKMK-ELEKLEKERIRLQEQQRRKEERDQKLREKEEAQR 159
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 30.3 bits (65), Expect = 0.29
Identities = 22/89 (24%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Frame = +3
Query: 426 IREKLEYESEAYPFTIQEMMETTRQK--RLAEEEKILKRDQEIVAKMAKLEMWKKELRNK 599
I+ ++EYE ++ ++K RLAEEE +LK QE + +L+ +++++ +
Sbjct: 857 IQAQIEYEKSVAAKLEDARIQREKEKARRLAEEEALLKEKQE---RERQLQEERQKMQEE 913
Query: 600 VAKKTAEAQAAKDKKERLVEEVRRHFGFK 686
V + Q A + L ++ + G K
Sbjct: 914 VLEWRKSQQKASEDDMSLSDDEEKQSGKK 942
>SPAC8C9.07 |||rRNA processing protein Fyv7 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 144
Score = 28.7 bits (61), Expect = 0.87
Identities = 15/52 (28%), Positives = 32/52 (61%)
Frame = +3
Query: 471 IQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNKVAKKTAEAQ 626
+QE+ E + +KR ++EK + Q+ + ++ K + +++ RN ++KKT Q
Sbjct: 76 LQELYERSEEKRRIQQEKEDAKVQKRL-EIEKKQKDREQTRNMLSKKTKRGQ 126
>SPBC14F5.08 |med7||mediator complex subunit
Med7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 28.3 bits (60), Expect = 1.2
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 216 VAQAKEEEINKKRNISRLSMSHHNLVNGKRPYDYPMSLAHLTVK 347
+A+A E+ +K NI L ++ H+L+N RP+ SL L K
Sbjct: 246 MAKAPEQFPSKVENIRVLLLNLHHLINDYRPHQSRESLIMLLEK 289
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 27.9 bits (59), Expect = 1.5
Identities = 25/81 (30%), Positives = 42/81 (51%)
Frame = +3
Query: 471 IQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNKVAKKTAEAQAAKDKKER 650
+Q+M+E +KR EEE+ R++E A++A+ E K L + EA+ K +KER
Sbjct: 250 LQKMLE---EKRAREEEEQRIREEE--ARIAEEE---KRLAEVEEARKEEARLKKKEKER 301
Query: 651 LVEEVRRHFGFKLDSRDERFQ 713
+E + G L + + Q
Sbjct: 302 KKKEEMKAQGKYLSKKQKEQQ 322
Score = 27.9 bits (59), Expect = 1.5
Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Frame = +3
Query: 426 IREKLEYESEAYPFTIQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNK-- 599
+ EK E E +E +KRLAE E+ K + + K K K+E++ +
Sbjct: 254 LEEKRAREEEEQRIREEEARIAEEEKRLAEVEEARKEEARL-KKKEKERKKKEEMKAQGK 312
Query: 600 -VAKKTAEAQA-AKDKKERLVEEVRRHFGFKLDSRDER 707
++KK E QA A+ + ++++E R G + ++
Sbjct: 313 YLSKKQKEQQALAQRRLQQMLESGVRVAGLSNGEKKQK 350
>SPBC365.07c |||TATA element modulatory factor homolog
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 547
Score = 27.9 bits (59), Expect = 1.5
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Frame = +3
Query: 468 TIQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEM----WKKE---LRNKVAKKTAEAQ 626
T+ R + + E+EK K Q++ K E W++E +N+V++ + +
Sbjct: 148 TLSTQYSIQRSQWVREDEKKKKEIQDLKELYEKSEHGAKNWERERETFQNQVSQMSKQLD 207
Query: 627 AAKDKKERLVEEVRRHFGFKLDSRDE 704
+ + ER EE+R F + R+E
Sbjct: 208 SLEKLCERKDEEIRSSQAFNMTLREE 233
>SPCC1620.11 |mug87||nucleoporin Nic96 homolog|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 851
Score = 27.9 bits (59), Expect = 1.5
Identities = 33/102 (32%), Positives = 42/102 (41%), Gaps = 8/102 (7%)
Frame = +3
Query: 171 EAIEQNEQVIIDDSDVAQAKEEEINKKRNISRLSMSHHNLVNGKRPYDYPMSLAH----- 335
EA+ QN Q+ D Q EEE K SR S + L N KR YP S+
Sbjct: 120 EALVQNTQIAFD-----QYLEEEWRSKAAKSRPSFDNILLENKKRVSFYPFSVQRSQKFA 174
Query: 336 LTVKYNRKMYGKYGSASGVNPSLCWPTRA---DIREKLEYES 452
T+K + +G S + S C R D + L YES
Sbjct: 175 STLKMCLEEEALHGFQSKLVSSFCEVAREFAHDTKSLLLYES 216
>SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein
Klp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 784
Score = 27.9 bits (59), Expect = 1.5
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +3
Query: 459 YPFTIQEMMETTR--QKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNKVAKKTAEAQAA 632
Y TI E+ + QKR+AEE K L ++E V K++ E+ + R+ + +
Sbjct: 407 YVRTIYELRQKVSILQKRIAEESKQLALNKE-VRKISSREIKMLDARSMLKN---SFDGS 462
Query: 633 KDKKERLVEEVR 668
+D ++ L+E VR
Sbjct: 463 RDLQKSLIEHVR 474
>SPAC17G6.07c |||SNARE Slt1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 222
Score = 27.9 bits (59), Expect = 1.5
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +3
Query: 483 METTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNKVAKKTAEAQAAK 635
+ T +K+L EEK +K QE A + ++ELR + EA A+
Sbjct: 71 LNVTMEKKLKIEEKKIKSKQEKEIAHALQSIQERELRERQQMSNVEASNAQ 121
>SPBC21C3.02c |sds3||Sds3-like family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 491
Score = 27.9 bits (59), Expect = 1.5
Identities = 41/180 (22%), Positives = 69/180 (38%), Gaps = 3/180 (1%)
Frame = +3
Query: 177 IEQNEQVIIDDSDVAQAKEEEINKKRNISRLSMSHHNLVNGKRPYDYPMSLAHLTVKYNR 356
IE N +++S EEE +++ NI R S H + + P + +R
Sbjct: 193 IETNHNSKLEESS---EHEEEEDEESNIERTEDSDHQIPQRGGTLEAPRKGGPRSGVGSR 249
Query: 357 KMYGKYGSASGVNPSLCWPTRADIREK---LEYESEAYPFTIQEMMETTRQKRLAEEEKI 527
K S W T ++ + K LE E I + + Q A++EK
Sbjct: 250 KR-------KRATVSRKWSTNSESKIKRVALETSQEESDREIADRRSASEQAHEADDEKA 302
Query: 528 LKRDQEIVAKMAKLEMWKKELRNKVAKKTAEAQAAKDKKERLVEEVRRHFGFKLDSRDER 707
+KR +E + +E LRN++ K + + +E + E F +D ER
Sbjct: 303 IKR-KEAFDALLNIETEFTFLRNRLYGK--KLLKLNEHEEMIQNETHERFNACIDLITER 359
>SPBC1105.08 |||EMP70 family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 629
Score = 27.5 bits (58), Expect = 2.0
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -1
Query: 484 IISCIVKGYASDSYSNFSLMSALVGQHKLGFTPLALPYFPYIFLLYFTV 338
IIS V GY S ++ LM ++ + L TP +P F L+F +
Sbjct: 374 IISGFVSGYVSAL--SYKLMQGMLRKRNLLLTPFVVPGFMLAAALFFNM 420
>SPBC1289.14 ||SPBC8E4.10c|adducin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 324
Score = 27.5 bits (58), Expect = 2.0
Identities = 21/102 (20%), Positives = 42/102 (41%), Gaps = 1/102 (0%)
Frame = +3
Query: 318 PMSLAHLTVKYNRKMYGKYGSASGVNPSLCWPTRADIREKLEY-ESEAYPFTIQEMMETT 494
P+SL + N + Y + +GVN + T + + K + E ++EM+ +
Sbjct: 8 PLSLKNAAKCINNSLRSTY-AITGVNLTRGLATNSKVDPKTYAPKPEFSSIAVREMLRKS 66
Query: 495 RQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNKVAKKTAE 620
+EE + + ++ LE W + + N + K E
Sbjct: 67 CLHEFTDEEVATRIELAAAYRLFGLEHWNENILNHLTAKVEE 108
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 27.1 bits (57), Expect = 2.7
Identities = 19/71 (26%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +3
Query: 159 STTSEAIEQNEQVIIDDSDVAQAKEEEINKKRNISRLSMSHHNLVNGKRPYDYPMSL--A 332
S +E I Q EQ+I + + ++ EEE K+ + ++ + + H + K Y+ ++ A
Sbjct: 508 SEKTETIAQLEQIIEELHEELRSLEEESIKESSATQQNENQHKRSSRKLLYEDKQAIQEA 567
Query: 333 HLTVKYNRKMY 365
H T+ RK++
Sbjct: 568 H-TINTKRKLW 577
>SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 420
Score = 27.1 bits (57), Expect = 2.7
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +3
Query: 429 REKLEYESEAYPFTIQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNK-VA 605
R+KLE +AY E+ QK E+++ + +++I + K E ++++N+ +A
Sbjct: 135 RKKLESRRQAY--------ESLLQKSFKEKKEDSRLEEDIRLALYKFEESTEQVKNRMIA 186
Query: 606 KKTAEAQAAKDKKERLVEEV 665
K EA + E +V E+
Sbjct: 187 LKDVEADQYQQLTELIVYEL 206
>SPBC119.15 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 367
Score = 26.6 bits (56), Expect = 3.5
Identities = 17/66 (25%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +3
Query: 510 AEEEKILKRDQEIVAKMAKLEMWKKELRNKVAKKTAEAQAAKDKKERLVEEVRRHFGFKL 689
A + K+ + ++E V +M ++ KE++ + ++ EAQ +K K+ V + + G +
Sbjct: 255 AVKAKVKEYEEEYVPEMERM----KEIQRQTKERQKEAQLSKLMKDMHVSKDKEDVGLTV 310
Query: 690 -DSRDE 704
D+ DE
Sbjct: 311 SDAEDE 316
>SPBC30B4.02c |||R3H and G-patch domain, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 26.6 bits (56), Expect = 3.5
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +3
Query: 477 EMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNKVAKKTA 617
E + +++ +EEK LK+D+++ KM K + K+L K K A
Sbjct: 403 EKVSQSKKGAKVKEEKGLKKDRKLPKKMRKAQ---KKLERKAGKAVA 446
>SPBC32H8.13c |mok12||alpha-1,3-glucan synthase
Mok12|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2352
Score = 26.6 bits (56), Expect = 3.5
Identities = 9/30 (30%), Positives = 20/30 (66%)
Frame = +3
Query: 177 IEQNEQVIIDDSDVAQAKEEEINKKRNISR 266
I +++++ DSD++ + E+INK +S+
Sbjct: 1737 IVESKEIYASDSDISNSTSEDINKDECVSK 1766
>SPAC31G5.18c |||ubiquitin family, human C1ORF55
related|Schizosaccharomyces pombe|chr 1|||Manual
Length = 263
Score = 26.2 bits (55), Expect = 4.7
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +3
Query: 582 KELRNKVAKKTAEAQAAKDKKERLVEEV 665
KEL +AKK AE +A K+ K++ + +V
Sbjct: 127 KELSEYLAKKPAETRAKKEAKKQKLNKV 154
>SPAC926.04c |hsp90|swo1|heat shock protein
Hsp90|Schizosaccharomyces pombe|chr 1|||Manual
Length = 704
Score = 26.2 bits (55), Expect = 4.7
Identities = 20/76 (26%), Positives = 35/76 (46%)
Frame = +3
Query: 426 IREKLEYESEAYPFTIQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNKVA 605
I++ ++ SE + IQ ++ +K + EEE+ + E K K+E E K
Sbjct: 191 IKDTVKKHSEFISYPIQLVVTREVEKEVPEEEETEEVKNEEDDKAPKIEEVDDESEKK-E 249
Query: 606 KKTAEAQAAKDKKERL 653
KKT + + + E L
Sbjct: 250 KKTKKVKETTTETEEL 265
>SPCC4B3.12 |set9||histone lysine methyltransferase
Set9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 441
Score = 26.2 bits (55), Expect = 4.7
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 228 KEEEINKKRNISRLSMSHHNLVNGKRPYDY 317
KE+EIN KRN+ ++ SH + K+ DY
Sbjct: 412 KEKEINTKRNL--VTSSHSMSLRHKKAVDY 439
>SPBC17D11.05 |tif32||translation initiation factor
eIF3a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 932
Score = 26.2 bits (55), Expect = 4.7
Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Frame = +3
Query: 435 KLEYESEAYPFTIQEMMETTRQKRLAEEEKIL------KRDQEIVAKMAKLEMWKKELRN 596
K + ESEA +QE + +R+ E++ + K +E+ AK LE+ ++L +
Sbjct: 592 KQKQESEAESLRVQEEINKRNAERIRREKEAIRINEAKKLAEELKAK-GGLEVNAEDLEH 650
Query: 597 KVAKKTAEAQAAK-DKKERLVEEVRRHFGFKLDSRDERFQ 713
A K Q + +K+ + + E R G ++D + ++
Sbjct: 651 LDADKLRAMQIEQVEKQNKSMNERLRVIGKRIDHLERAYR 690
>SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1183
Score = 26.2 bits (55), Expect = 4.7
Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +3
Query: 495 RQKRLAE-EEKILKRDQEIVAKMAKLEMWKKELRNKVAKKTAEAQAAKDKKERL 653
RQKR E ++++LK ++ ++ K + K + NK+ K+ + AK +ER+
Sbjct: 65 RQKRKQELKDQLLKENEGSISSKKKKRL-DKYIENKLKKEEVASLIAKLAEERI 117
>SPAC29B12.02c |set2||histone lysine methyltransferase Set2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 798
Score = 25.8 bits (54), Expect = 6.1
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Frame = +3
Query: 471 IQEMMETTRQKRLA-----EEEKILKRDQEIVAKMAKLEMWKKELRNKVAKKTAEAQAA 632
I ME+ QK + EEE+I ++ +E ++A E K+ + KKT +Q A
Sbjct: 625 ISAAMESVNQKNVLKAQKEEEERIAQQKREEKRRLAYEESLKRHAKKLHEKKTKSSQDA 683
>SPAC1952.11c |ure2||urease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 835
Score = 25.8 bits (54), Expect = 6.1
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 360 MYGK-YGSASGVNPSLCWPTRADIREKLEYESEAYPFTI 473
MYG G ++G N + C P + IR L +++YP I
Sbjct: 424 MYGGGTGPSTGTNATTCTPNKDLIRSMLR-STDSYPMNI 461
>SPBC19C7.11 |||ClC chloride channel |Schizosaccharomyces pombe|chr
2|||Manual
Length = 812
Score = 25.8 bits (54), Expect = 6.1
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -1
Query: 490 VSIISCIVKGYASDSYSNFSLM 425
+S I CI+ G+ DS+ +F +M
Sbjct: 210 ISEIKCIISGFLRDSFLSFRVM 231
>SPBC776.16 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 253
Score = 25.8 bits (54), Expect = 6.1
Identities = 20/75 (26%), Positives = 30/75 (40%)
Frame = +3
Query: 162 TTSEAIEQNEQVIIDDSDVAQAKEEEINKKRNISRLSMSHHNLVNGKRPYDYPMSLAHLT 341
TTS+ + I KE + N+S +S N+++ R Y S+ L+
Sbjct: 116 TTSKNKHPSHSNTIRSPPYKVKKESCHTEINNVSNVSTESINVIDASRGYSPYTSVDSLS 175
Query: 342 VKYNRKMYGKYGSAS 386
V NR SAS
Sbjct: 176 VSKNRSFISLEESAS 190
>SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1692
Score = 25.4 bits (53), Expect = 8.1
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = -1
Query: 394 FTPLAL--PYFPYIFLLYFTVK*AKLIG 317
F PL P F Y L+YF + AKLIG
Sbjct: 646 FCPLTTIDPAFSYSNLVYFDISHAKLIG 673
>SPAC6B12.05c |||chromatin remodeling complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 295
Score = 25.4 bits (53), Expect = 8.1
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 4/31 (12%)
Frame = +3
Query: 171 EAIEQN----EQVIIDDSDVAQAKEEEINKK 251
EA+E++ E+ IIDD + AQ EEE+ ++
Sbjct: 55 EALEEDDTNYEEDIIDDEESAQVDEEELEEE 85
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 25.4 bits (53), Expect = 8.1
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Frame = +3
Query: 477 EMMETTRQKRLAEEEKILKRDQEIVAKM--AKLEMWK--KELRNKVAKKTAEAQAAKDKK 644
E+ E+ R + ++ K LKRDQE K+ A L ++ KE K+ + E+
Sbjct: 176 EIFESLRYAKALDQIKGLKRDQETQVKVDQATLTHYRSDKERAEKIELRVHESLKRISCI 235
Query: 645 ERLVEEVRRHFGFKLDSRDERFQ 713
VEE+ + +DE F+
Sbjct: 236 RSKVEELDQEITETARLQDELFK 258
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,796,205
Number of Sequences: 5004
Number of extensions: 57712
Number of successful extensions: 267
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 259
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 333194204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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