Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9a06
         (432 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7VCF2 Cluster: Predicted protein; n=2; Prochlorococcus...    33   2.6  
UniRef50_A1BBA8 Cluster: Integral membrane sensor signal transdu...    32   5.9  
UniRef50_Q2QZH4 Cluster: NB-ARC domain containing protein; n=13;...    31   7.8  
UniRef50_Q8ZZC3 Cluster: Putative uncharacterized protein PAE032...    31   7.8  

>UniRef50_Q7VCF2 Cluster: Predicted protein; n=2; Prochlorococcus
           marinus|Rep: Predicted protein - Prochlorococcus marinus
          Length = 86

 Score = 33.1 bits (72), Expect = 2.6
 Identities = 12/30 (40%), Positives = 21/30 (70%)
 Frame = +1

Query: 127 VYSIIDLLFYVMLVCWNVNRVLGLMTSVFI 216
           VYS   L+  ++L+ W VN +LGL++ +F+
Sbjct: 20  VYSTATLIISILLLLWAVNFILGLISKIFV 49


>UniRef50_A1BBA8 Cluster: Integral membrane sensor signal
           transduction histidine kinase precursor; n=2; Paracoccus
           denitrificans PD1222|Rep: Integral membrane sensor
           signal transduction histidine kinase precursor -
           Paracoccus denitrificans (strain Pd 1222)
          Length = 474

 Score = 31.9 bits (69), Expect = 5.9
 Identities = 13/25 (52%), Positives = 18/25 (72%), Gaps = 2/25 (8%)
 Frame = -1

Query: 288 NSIRFVDAVTPVR--QWRDSGRAFC 220
           N++++ DA +PVR   WRD GR FC
Sbjct: 361 NAMKYSDAPSPVRLDTWRDGGRIFC 385


>UniRef50_Q2QZH4 Cluster: NB-ARC domain containing protein; n=13;
           Oryza sativa|Rep: NB-ARC domain containing protein -
           Oryza sativa subsp. japonica (Rice)
          Length = 1135

 Score = 31.5 bits (68), Expect = 7.8
 Identities = 18/37 (48%), Positives = 26/37 (70%)
 Frame = -3

Query: 346 DSNTIHNILHLSTSIIDSLQLYSVRRRSDARTAVARL 236
           ++N++   L +  + +D  QL S+RR SDARTAVARL
Sbjct: 34  ETNSLQQDLRIVAAAMDD-QLLSIRR-SDARTAVARL 68


>UniRef50_Q8ZZC3 Cluster: Putative uncharacterized protein PAE0329;
           n=4; Pyrobaculum|Rep: Putative uncharacterized protein
           PAE0329 - Pyrobaculum aerophilum
          Length = 482

 Score = 31.5 bits (68), Expect = 7.8
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = -3

Query: 328 NILHLSTSIIDSLQLYSVRRRSDARTAVARLGPSVLH 218
           N+  +   IID+++LY  RR +  R   A L PS+L+
Sbjct: 134 NVRSIPADIIDAMELYVKRRWAKLRILTAELKPSILY 170


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 413,460,280
Number of Sequences: 1657284
Number of extensions: 7556187
Number of successful extensions: 18136
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17673
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18127
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21075479950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)