Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9a06
         (432 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF062385-1|AAD11629.1|  247|Homo sapiens unknown protein.              31   2.2  
Z98304-8|CAM28265.1|  639|Homo sapiens zinc finger protein 182 p...    29   6.8  
Z98304-7|CAC41951.1|  620|Homo sapiens zinc finger protein 182 p...    29   6.8  
BC114216-1|AAI14217.1|  620|Homo sapiens zinc finger protein 182...    29   6.8  
BC106875-1|AAI06876.1|  639|Homo sapiens zinc finger protein 182...    29   6.8  

>AF062385-1|AAD11629.1|  247|Homo sapiens unknown protein.
          Length = 247

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 19/49 (38%), Positives = 24/49 (48%)
 Frame = -1

Query: 150 QKIDNRIY*KSFKLSITRQKPQCRFKILRPFYKVSSMATSISHGEPAST 4
           Q I+ R   ++  LS T+Q PQ  F   R   K  S  + I HG  AST
Sbjct: 78  QNINKRKQKQNTTLSGTKQNPQILFYYTRHEVKSLSTVSPIDHGRKAST 126


>Z98304-8|CAM28265.1|  639|Homo sapiens zinc finger protein 182
           protein.
          Length = 639

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = -3

Query: 367 IINKTK*DSNTIHNILHLSTSIIDSLQ 287
           II K+  D +   NILHLST+++ S+Q
Sbjct: 129 IITKSARDCHEFGNILHLSTNLVASIQ 155


>Z98304-7|CAC41951.1|  620|Homo sapiens zinc finger protein 182
           protein.
          Length = 620

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = -3

Query: 367 IINKTK*DSNTIHNILHLSTSIIDSLQ 287
           II K+  D +   NILHLST+++ S+Q
Sbjct: 110 IITKSARDCHEFGNILHLSTNLVASIQ 136


>BC114216-1|AAI14217.1|  620|Homo sapiens zinc finger protein 182
           protein.
          Length = 620

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = -3

Query: 367 IINKTK*DSNTIHNILHLSTSIIDSLQ 287
           II K+  D +   NILHLST+++ S+Q
Sbjct: 110 IITKSARDCHEFGNILHLSTNLVASIQ 136


>BC106875-1|AAI06876.1|  639|Homo sapiens zinc finger protein 182
           protein.
          Length = 639

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = -3

Query: 367 IINKTK*DSNTIHNILHLSTSIIDSLQ 287
           II K+  D +   NILHLST+++ S+Q
Sbjct: 129 IITKSARDCHEFGNILHLSTNLVASIQ 155


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,379,614
Number of Sequences: 237096
Number of extensions: 1194849
Number of successful extensions: 2850
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2846
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3430805640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)