Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9a06
         (432 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            25   0.27 
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   3.4  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    22   3.4  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   3.4  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   7.8  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   7.8  

>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 25.4 bits (53), Expect = 0.27
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
 Frame = -1

Query: 321 YICRHQS*IAYNSIRFVDAV--TPVRQWRDSG 232
           +IC H+    YN +RF + V  T +  W D+G
Sbjct: 378 WICEHRWRQIYNMVRFRNLVKGTKIDNWWDNG 409


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = -1

Query: 246 WRDSGRAFCTYKHARHQPEYSIHIP 172
           WR+  +A+  ++ A  QP+ + + P
Sbjct: 175 WREERQAYYLHQFAPEQPDLNYYNP 199


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 163 LVCWNVNRVL 192
           L CWN NR+L
Sbjct: 325 LACWNENRLL 334


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = -1

Query: 246 WRDSGRAFCTYKHARHQPEYSIHIP 172
           WR+  +A+  ++ A  QP+ + + P
Sbjct: 175 WREERQAYYLHQFAPEQPDLNYYNP 199


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 10/25 (40%), Positives = 11/25 (44%)
 Frame = +3

Query: 219 CRTLGPSRATAVRASLRLRTE*SCR 293
           CRT GP     V AS     +  CR
Sbjct: 714 CRTSGPRGVAIVSASTARSEQFLCR 738


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 279 RFVDAVTPVRQWRDSGRAFCTYKH 208
           RF   V P+++ +DS    C +K+
Sbjct: 134 RFFCEVRPIKRVKDSTNCNCGWKN 157


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,520
Number of Sequences: 438
Number of extensions: 2616
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11244597
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)