Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9a04
         (269 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-863|AAS64639.1|  338|Drosophila melanogaster CG9124-PB,...    69   9e-13
AE014134-862|AAF52210.3|  338|Drosophila melanogaster CG9124-PA,...    69   9e-13
AF160896-1|AAD46836.2|  337|Drosophila melanogaster GM14618p pro...    67   4e-12
AY122066-1|AAM52578.1|  690|Drosophila melanogaster AT09438p pro...    26   8.3  
AE013599-2499|AAG22261.1|  690|Drosophila melanogaster CG4878-PB...    26   8.3  
AE013599-2498|AAF57842.1|  690|Drosophila melanogaster CG4878-PA...    26   8.3  

>AE014134-863|AAS64639.1|  338|Drosophila melanogaster CG9124-PB,
           isoform B protein.
          Length = 338

 Score = 68.9 bits (161), Expect = 9e-13
 Identities = 40/87 (45%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
 Frame = +1

Query: 13  MASRAGSXX-RAPEXEATIXYXQCXGLAVMXIXXHCHEESCXXXXXXXXXXXXXXXENRL 189
           MA+RA     R  + + TI Y QC GLAVM +  HCHEES                +  L
Sbjct: 1   MANRANRHAARTEDSDNTINYVQCDGLAVMKMVKHCHEES-SNMDLAQGALLGLVVDKCL 59

Query: 190 EITXCFPFPKH-DDXMDXEEYQLDMMR 267
           EIT CFPFPK  D+ MD E YQL +MR
Sbjct: 60  EITNCFPFPKSGDETMDEEMYQLTVMR 86


>AE014134-862|AAF52210.3|  338|Drosophila melanogaster CG9124-PA,
           isoform A protein.
          Length = 338

 Score = 68.9 bits (161), Expect = 9e-13
 Identities = 40/87 (45%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
 Frame = +1

Query: 13  MASRAGSXX-RAPEXEATIXYXQCXGLAVMXIXXHCHEESCXXXXXXXXXXXXXXXENRL 189
           MA+RA     R  + + TI Y QC GLAVM +  HCHEES                +  L
Sbjct: 1   MANRANRHAARTEDSDNTINYVQCDGLAVMKMVKHCHEES-SNMDLAQGALLGLVVDKCL 59

Query: 190 EITXCFPFPKH-DDXMDXEEYQLDMMR 267
           EIT CFPFPK  D+ MD E YQL +MR
Sbjct: 60  EITNCFPFPKSGDETMDEEMYQLTVMR 86


>AF160896-1|AAD46836.2|  337|Drosophila melanogaster GM14618p
           protein.
          Length = 337

 Score = 66.9 bits (156), Expect = 4e-12
 Identities = 36/77 (46%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
 Frame = +1

Query: 40  RAPEXEATIXYXQCXGLAVMXIXXHCHEESCXXXXXXXXXXXXXXXENRLEITXCFPFPK 219
           R  + + TI Y QC GLAVM +  HCHEES                +  LEIT CFPFPK
Sbjct: 10  RTEDSDNTINYVQCDGLAVMKMVKHCHEES-SNMDLAQGALLGLVVDKCLEITNCFPFPK 68

Query: 220 H-DDXMDXEEYQLDMMR 267
             D+ MD E YQL +MR
Sbjct: 69  SGDETMDEEMYQLTVMR 85


>AY122066-1|AAM52578.1|  690|Drosophila melanogaster AT09438p
           protein.
          Length = 690

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 9/30 (30%), Positives = 19/30 (63%)
 Frame = -3

Query: 237 IHGVVMLWKWEAVGNLQTVLNDQTKESSXS 148
           I  +++ + WE VGN  ++++ +T  S+ S
Sbjct: 443 IRELILAFAWEPVGNKFSIIHGETNSSNVS 472


>AE013599-2499|AAG22261.1|  690|Drosophila melanogaster CG4878-PB,
           isoform B protein.
          Length = 690

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 9/30 (30%), Positives = 19/30 (63%)
 Frame = -3

Query: 237 IHGVVMLWKWEAVGNLQTVLNDQTKESSXS 148
           I  +++ + WE VGN  ++++ +T  S+ S
Sbjct: 443 IRELILAFAWEPVGNKFSIIHGETNSSNVS 472


>AE013599-2498|AAF57842.1|  690|Drosophila melanogaster CG4878-PA,
           isoform A protein.
          Length = 690

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 9/30 (30%), Positives = 19/30 (63%)
 Frame = -3

Query: 237 IHGVVMLWKWEAVGNLQTVLNDQTKESSXS 148
           I  +++ + WE VGN  ++++ +T  S+ S
Sbjct: 443 IRELILAFAWEPVGNKFSIIHGETNSSNVS 472


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,524,288
Number of Sequences: 53049
Number of extensions: 105336
Number of successful extensions: 111
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 108
length of database: 24,988,368
effective HSP length: 68
effective length of database: 21,381,036
effective search space used: 449001756
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)