Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9a03
         (762 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.7  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   4.6  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   4.6  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   8.1  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 12/45 (26%), Positives = 21/45 (46%)
 Frame = -1

Query: 684 TTHSLFDVIRLSVILGWICFDIYGY**CIYVFFIDDFLF*ICKEW 550
           T H LF +        +I F ++    C ++FF    LF +C ++
Sbjct: 157 TVHLLFLLCIYHFFCAFIIFTMHLLFCCAFIFFNMHLLFLLCLDY 201


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
 Frame = +1

Query: 370 PNFKHMKKYLKCKFGEESHSPQYHAVTE----FPEAEAMEKKGNEQTEKV 507
           PN+ H   +     GE +H P  H   E    + + E M +K  E + KV
Sbjct: 386 PNYNHYGYHYSGDGGEVAHLPNTHMGHEPGAAYYQNENMLQKNAEYSGKV 435


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
 Frame = +1

Query: 370 PNFKHMKKYLKCKFGEESHSPQYHAVTE----FPEAEAMEKKGNEQTEKV 507
           PN+ H   +     GE +H P  H   E    + + E M +K  E + KV
Sbjct: 334 PNYNHYGYHYSGDGGEVAHLPNTHMGHEPGAAYYQNENMLQKNAEYSGKV 383


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -3

Query: 346 LHPLYSGNLS 317
           L PLYSGNL+
Sbjct: 492 LEPLYSGNLA 501


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,995
Number of Sequences: 336
Number of extensions: 3406
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)