Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9a03
(762 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC018708-1|AAH18708.1| 434|Homo sapiens zinc finger CCCH-type c... 37 0.090
AK027357-1|BAB55059.1| 434|Homo sapiens protein ( Homo sapiens ... 37 0.090
BC131534-1|AAI31535.1| 1386|Homo sapiens DEAH (Asp-Glu-Ala-Asp/H... 32 2.6
BC060778-1|AAH60778.2| 658|Homo sapiens DHX57 protein protein. 32 2.6
AK057423-1|BAB71479.1| 433|Homo sapiens protein ( Homo sapiens ... 32 2.6
Y13829-1|CAA74155.1| 388|Homo sapiens MBNL protein protein. 31 4.5
BC050535-1|AAH50535.1| 343|Homo sapiens MBNL1 protein protein. 31 4.5
BC043493-1|AAH43493.1| 382|Homo sapiens muscleblind-like (Droso... 31 4.5
AJ308400-1|CAC83727.1| 382|Homo sapiens MBNL protein protein. 31 4.5
AF497719-1|AAP30727.1| 342|Homo sapiens muscleblind-like protei... 31 4.5
AF497718-1|AAP30726.1| 341|Homo sapiens muscleblind-like protei... 31 4.5
AF401998-1|AAK94915.1| 382|Homo sapiens muscleblind 41kD isofor... 31 4.5
AF395876-1|AAK82889.1| 314|Homo sapiens 36 kDa muscleblind prot... 31 4.5
AF334161-1|AAK13496.1| 291|Homo sapiens zinc finger protein pro... 31 4.5
AF255334-1|AAF76138.1| 302|Homo sapiens EXP35 protein. 31 4.5
AB007888-1|BAA24858.2| 373|Homo sapiens KIAA0428 protein. 31 4.5
BC032001-1|AAH32001.1| 297|Homo sapiens ZC3H8 protein protein. 31 5.9
AC092645-3|AAY14855.1| 266|Homo sapiens unknown protein. 31 5.9
BC050463-1|AAH50463.1| 953|Homo sapiens conserved nuclear prote... 30 7.8
>BC018708-1|AAH18708.1| 434|Homo sapiens zinc finger CCCH-type
containing 10 protein.
Length = 434
Score = 36.7 bits (81), Expect = 0.090
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 670 ETMCRNFVRNTCNRGASCRYLH 735
+ +CR+F+RN C RG CRY H
Sbjct: 39 DAICRDFLRNVCKRGKRCRYRH 60
Score = 35.1 bits (77), Expect = 0.28
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +1
Query: 655 PNDVEET-MCRNFVRNTCNRGASCRYLH 735
PN EE +CR+F++ C RGA C++ H
Sbjct: 131 PNGKEEVPICRDFLKGDCQRGAKCKFRH 158
>AK027357-1|BAB55059.1| 434|Homo sapiens protein ( Homo sapiens
cDNA FLJ14451 fis, clone HEMBB1001834. ).
Length = 434
Score = 36.7 bits (81), Expect = 0.090
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 670 ETMCRNFVRNTCNRGASCRYLH 735
+ +CR+F+RN C RG CRY H
Sbjct: 39 DAICRDFLRNVCKRGKRCRYRH 60
Score = 35.1 bits (77), Expect = 0.28
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +1
Query: 655 PNDVEET-MCRNFVRNTCNRGASCRYLH 735
PN EE +CR+F++ C RGA C++ H
Sbjct: 131 PNGKEEVPICRDFLKGDCQRGAKCKFRH 158
>BC131534-1|AAI31535.1| 1386|Homo sapiens DEAH (Asp-Glu-Ala-Asp/His)
box polypeptide 57 protein.
Length = 1386
Score = 31.9 bits (69), Expect = 2.6
Identities = 11/46 (23%), Positives = 25/46 (54%)
Frame = +1
Query: 625 KTDPTENDGKPNDVEETMCRNFVRNTCNRGASCRYLHKIIHSQLKG 762
K+ P E+ + +C+ +++ C G+ CR+ H++ +Q+ G
Sbjct: 287 KSKPKESTKNVQENSLEICKFYLKGNCKFGSKCRFKHEVPPNQIVG 332
>BC060778-1|AAH60778.2| 658|Homo sapiens DHX57 protein protein.
Length = 658
Score = 31.9 bits (69), Expect = 2.6
Identities = 11/46 (23%), Positives = 25/46 (54%)
Frame = +1
Query: 625 KTDPTENDGKPNDVEETMCRNFVRNTCNRGASCRYLHKIIHSQLKG 762
K+ P E+ + +C+ +++ C G+ CR+ H++ +Q+ G
Sbjct: 287 KSKPKESTKNVQENSLEICKFYLKGNCKFGSKCRFKHEVPPNQIVG 332
>AK057423-1|BAB71479.1| 433|Homo sapiens protein ( Homo sapiens
cDNA FLJ32861 fis, clone TESTI2003589. ).
Length = 433
Score = 31.9 bits (69), Expect = 2.6
Identities = 11/46 (23%), Positives = 25/46 (54%)
Frame = +1
Query: 625 KTDPTENDGKPNDVEETMCRNFVRNTCNRGASCRYLHKIIHSQLKG 762
K+ P E+ + +C+ +++ C G+ CR+ H++ +Q+ G
Sbjct: 185 KSKPKESTKNVQENSLEICKFYLKGNCKFGSKCRFKHEVPPNQIVG 230
>Y13829-1|CAA74155.1| 388|Homo sapiens MBNL protein protein.
Length = 388
Score = 31.1 bits (67), Expect = 4.5
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 658 NDVEETMCRNFVRNTCNRGASCRYLHKIIHSQLK 759
ND T+C ++++ C+R C+Y H H Q K
Sbjct: 214 NDNTVTVCMDYIKGRCSR-EKCKYFHPPAHLQAK 246
>BC050535-1|AAH50535.1| 343|Homo sapiens MBNL1 protein protein.
Length = 343
Score = 31.1 bits (67), Expect = 4.5
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 658 NDVEETMCRNFVRNTCNRGASCRYLHKIIHSQLK 759
ND T+C ++++ C+R C+Y H H Q K
Sbjct: 157 NDNTVTVCMDYIKGRCSR-EKCKYFHPPAHLQAK 189
>BC043493-1|AAH43493.1| 382|Homo sapiens muscleblind-like
(Drosophila) protein.
Length = 382
Score = 31.1 bits (67), Expect = 4.5
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 658 NDVEETMCRNFVRNTCNRGASCRYLHKIIHSQLK 759
ND T+C ++++ C+R C+Y H H Q K
Sbjct: 214 NDNTVTVCMDYIKGRCSR-EKCKYFHPPAHLQAK 246
>AJ308400-1|CAC83727.1| 382|Homo sapiens MBNL protein protein.
Length = 382
Score = 31.1 bits (67), Expect = 4.5
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 658 NDVEETMCRNFVRNTCNRGASCRYLHKIIHSQLK 759
ND T+C ++++ C+R C+Y H H Q K
Sbjct: 214 NDNTVTVCMDYIKGRCSR-EKCKYFHPPAHLQAK 246
>AF497719-1|AAP30727.1| 342|Homo sapiens muscleblind-like protein
EXP41s protein.
Length = 342
Score = 31.1 bits (67), Expect = 4.5
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 658 NDVEETMCRNFVRNTCNRGASCRYLHKIIHSQLK 759
ND T+C ++++ C+R C+Y H H Q K
Sbjct: 214 NDNTVTVCMDYIKGRCSR-EKCKYFHPPAHLQAK 246
>AF497718-1|AAP30726.1| 341|Homo sapiens muscleblind-like protein
EXP40s protein.
Length = 341
Score = 31.1 bits (67), Expect = 4.5
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 658 NDVEETMCRNFVRNTCNRGASCRYLHKIIHSQLK 759
ND T+C ++++ C+R C+Y H H Q K
Sbjct: 214 NDNTVTVCMDYIKGRCSR-EKCKYFHPPAHLQAK 246
>AF401998-1|AAK94915.1| 382|Homo sapiens muscleblind 41kD isoform
protein.
Length = 382
Score = 31.1 bits (67), Expect = 4.5
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 658 NDVEETMCRNFVRNTCNRGASCRYLHKIIHSQLK 759
ND T+C ++++ C+R C+Y H H Q K
Sbjct: 214 NDNTVTVCMDYIKGRCSR-EKCKYFHPPAHLQAK 246
>AF395876-1|AAK82889.1| 314|Homo sapiens 36 kDa muscleblind protein
EXP36 protein.
Length = 314
Score = 31.1 bits (67), Expect = 4.5
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 658 NDVEETMCRNFVRNTCNRGASCRYLHKIIHSQLK 759
ND T+C ++++ C+R C+Y H H Q K
Sbjct: 146 NDNTVTVCMDYIKGRCSR-EKCKYFHPPAHLQAK 178
>AF334161-1|AAK13496.1| 291|Homo sapiens zinc finger protein
protein.
Length = 291
Score = 31.1 bits (67), Expect = 4.5
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +1
Query: 667 EETMCRNFVRNTCNRGASCRYLH 735
++ MC+ +V+ C+RG +C YLH
Sbjct: 222 KKEMCKFYVQGFCSRGENCLYLH 244
>AF255334-1|AAF76138.1| 302|Homo sapiens EXP35 protein.
Length = 302
Score = 31.1 bits (67), Expect = 4.5
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 658 NDVEETMCRNFVRNTCNRGASCRYLHKIIHSQLK 759
ND T+C ++++ C+R C+Y H H Q K
Sbjct: 146 NDNTVTVCMDYIKGRCSR-EKCKYFHPPAHLQAK 178
>AB007888-1|BAA24858.2| 373|Homo sapiens KIAA0428 protein.
Length = 373
Score = 31.1 bits (67), Expect = 4.5
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 658 NDVEETMCRNFVRNTCNRGASCRYLHKIIHSQLK 759
ND T+C ++++ C+R C+Y H H Q K
Sbjct: 217 NDNTVTVCMDYIKGRCSR-EKCKYFHPPAHLQAK 249
>BC032001-1|AAH32001.1| 297|Homo sapiens ZC3H8 protein protein.
Length = 297
Score = 30.7 bits (66), Expect = 5.9
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 667 EETMCRNFVRNTCNRGASCRYLH 735
++ MC+ +V+ C RG +C YLH
Sbjct: 222 KKEMCKFYVQGYCTRGENCLYLH 244
>AC092645-3|AAY14855.1| 266|Homo sapiens unknown protein.
Length = 266
Score = 30.7 bits (66), Expect = 5.9
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 667 EETMCRNFVRNTCNRGASCRYLH 735
++ MC+ +V+ C RG +C YLH
Sbjct: 197 KKEMCKFYVQGYCTRGENCLYLH 219
>BC050463-1|AAH50463.1| 953|Homo sapiens conserved nuclear protein
NHN1 protein.
Length = 953
Score = 30.3 bits (65), Expect = 7.8
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = +1
Query: 580 VNEEYIDTSSITINIKTDPTENDGKPNDVEETMCRNFVRNTCNRGASCRYLH 735
+++ ID + DP++ +P CR F++ C G +CR++H
Sbjct: 195 IDDGEIDDDDLEEGEVKDPSDRKVRPRPT----CRFFMKGNCTWGMNCRFIH 242
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,390,923
Number of Sequences: 237096
Number of extensions: 1775817
Number of successful extensions: 3625
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 3431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3625
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9144232952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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