Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9a03
(762 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 37 0.018
Z98866-11|CAB11564.2| 335|Caenorhabditis elegans Hypothetical p... 33 0.17
U62896-1|AAB17868.1| 335|Caenorhabditis elegans PIE-1 protein. 33 0.17
Z81537-8|CAB04380.1| 343|Caenorhabditis elegans Hypothetical pr... 32 0.39
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 30 2.1
Z74476-2|CAA98962.1| 200|Caenorhabditis elegans Hypothetical pr... 29 3.6
AJ010646-1|CAA09303.1| 1237|Caenorhabditis elegans calcium ATPas... 29 3.6
AC025724-13|AAK68551.1| 1234|Caenorhabditis elegans Membrane cal... 29 3.6
AC025724-12|AAK68550.1| 1160|Caenorhabditis elegans Membrane cal... 29 3.6
AC025724-11|AAM97979.1| 1137|Caenorhabditis elegans Membrane cal... 29 3.6
Z93379-9|CAE11301.1| 354|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z82267-3|CAB05191.1| 186|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z99281-15|CAB16528.1| 199|Caenorhabditis elegans Hypothetical p... 28 6.3
Z99281-12|CAB16521.1| 649|Caenorhabditis elegans Hypothetical p... 28 6.3
AC024826-3|AAP13746.1| 343|Caenorhabditis elegans Hypothetical ... 28 6.3
AC024826-2|AAF60798.1| 413|Caenorhabditis elegans Hypothetical ... 28 6.3
Z70205-4|CAA94115.2| 528|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z49889-5|CAA90070.1| 2207|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z49868-5|CAA90032.1| 2207|Caenorhabditis elegans Hypothetical pr... 28 8.3
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 36.7 bits (81), Expect = 0.018
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +1
Query: 640 ENDGKPNDVEETMCRNFVRNTCNRGASCRYLH 735
E++ + + +CR+F++N CNRG+ C++ H
Sbjct: 46 EHNKQQQQQRDDVCRDFLKNICNRGSRCKFYH 77
>Z98866-11|CAB11564.2| 335|Caenorhabditis elegans Hypothetical
protein Y49E10.14 protein.
Length = 335
Score = 33.5 bits (73), Expect = 0.17
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 634 PTENDGKPNDVEETMCRNFVRNTCNRGASCRYLH 735
P+ N G N +C NF R C G CR++H
Sbjct: 177 PSNNHGSSN--RRQICHNFERGNCRYGPRCRFIH 208
>U62896-1|AAB17868.1| 335|Caenorhabditis elegans PIE-1 protein.
Length = 335
Score = 33.5 bits (73), Expect = 0.17
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 634 PTENDGKPNDVEETMCRNFVRNTCNRGASCRYLH 735
P+ N G N +C NF R C G CR++H
Sbjct: 177 PSNNHGSSN--RRQICHNFERGNCRYGPRCRFIH 208
>Z81537-8|CAB04380.1| 343|Caenorhabditis elegans Hypothetical
protein F41D3.9 protein.
Length = 343
Score = 32.3 bits (70), Expect = 0.39
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = -3
Query: 343 HPLYSGNLSGLRLSFAFISFTPKRSLKHLEFLSQNNSHY 227
HP + L GL +S AFI P+R KH EF N S Y
Sbjct: 121 HPRHKYILYGLNMSEAFIEKLPQRD-KHFEFRVFNTSQY 158
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +1
Query: 661 DVEETMCRNFVRNTCNRGASCRYLH-KIIHSQL 756
D E+ CR TC++G C ++H K I ++L
Sbjct: 158 DFRESRCRQHEVTTCSKGGFCNFMHLKAISAEL 190
>Z74476-2|CAA98962.1| 200|Caenorhabditis elegans Hypothetical
protein W05B10.2 protein.
Length = 200
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/42 (23%), Positives = 23/42 (54%)
Frame = +1
Query: 616 INIKTDPTENDGKPNDVEETMCRNFVRNTCNRGASCRYLHKI 741
+++ P+E + K + + C+N+++ C G CR+ H +
Sbjct: 121 VDLSDKPSEKERKKS---KFTCKNYLKGKCRFGDKCRFSHPV 159
>AJ010646-1|CAA09303.1| 1237|Caenorhabditis elegans calcium ATPase
protein.
Length = 1237
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1
Query: 571 KEIVNEEYIDTSSITINIKTDPTENDGKPNDVEE 672
KE + +Y T+ + +KTDP N+G PN+ EE
Sbjct: 23 KEKIETDYGGTTGLCERLKTDP--NNGLPNNEEE 54
>AC025724-13|AAK68551.1| 1234|Caenorhabditis elegans Membrane
calcium atpase protein3, isoform b protein.
Length = 1234
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1
Query: 571 KEIVNEEYIDTSSITINIKTDPTENDGKPNDVEE 672
KE + +Y T+ + +KTDP N+G PN+ EE
Sbjct: 23 KEKIETDYGGTTGLCERLKTDP--NNGLPNNEEE 54
>AC025724-12|AAK68550.1| 1160|Caenorhabditis elegans Membrane
calcium atpase protein3, isoform a protein.
Length = 1160
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1
Query: 571 KEIVNEEYIDTSSITINIKTDPTENDGKPNDVEE 672
KE + +Y T+ + +KTDP N+G PN+ EE
Sbjct: 23 KEKIETDYGGTTGLCERLKTDP--NNGLPNNEEE 54
>AC025724-11|AAM97979.1| 1137|Caenorhabditis elegans Membrane
calcium atpase protein3, isoform c protein.
Length = 1137
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1
Query: 571 KEIVNEEYIDTSSITINIKTDPTENDGKPNDVEE 672
KE + +Y T+ + +KTDP N+G PN+ EE
Sbjct: 23 KEKIETDYGGTTGLCERLKTDP--NNGLPNNEEE 54
>Z93379-9|CAE11301.1| 354|Caenorhabditis elegans Hypothetical
protein F21H7.14 protein.
Length = 354
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/71 (28%), Positives = 33/71 (46%)
Frame = -1
Query: 456 EFCYCMILGRVTLLPKLAF*IFFHMFEIR*WLKINRIFIPYTLEICLACV*ASHLFLLPQ 277
+F +C + +LP L F +F W+ I + I CV +S+++LL
Sbjct: 77 DFIFCTLSTTYVILPMLGF-FGVGVFS---WMGIPYSVQLAFIVITALCVASSYVYLLEG 132
Query: 276 KGHSNI*NSFR 244
+ HS + N FR
Sbjct: 133 RSHSLLQNKFR 143
>Z82267-3|CAB05191.1| 186|Caenorhabditis elegans Hypothetical
protein F38C2.5 protein.
Length = 186
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +1
Query: 652 KPNDVEETMCRNF-VRNTCNRGASCRYLHKIIHSQLK 759
K N + +C+ F + C+ G C++ H + QLK
Sbjct: 69 KENAFKTALCKTFQLTRACSYGEQCKFAHSVEELQLK 105
>Z99281-15|CAB16528.1| 199|Caenorhabditis elegans Hypothetical
protein Y57G11C.25 protein.
Length = 199
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/56 (19%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +1
Query: 595 IDTSSITINIKTDPTENDGKPNDVEETMCRNF-VRNTCNRGASCRYLHKIIHSQLK 759
++ +I+ +++ + + N + +C+ F + C+ G C++ H + QLK
Sbjct: 46 VNPCTISDDVREEMMRLRRRENAFKTALCKTFQLTKACSYGEQCKFAHSVEELQLK 101
>Z99281-12|CAB16521.1| 649|Caenorhabditis elegans Hypothetical
protein Y57G11C.20 protein.
Length = 649
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Frame = +1
Query: 343 EDSINFQPSPNFKHMKKYLKCKFGEESHSPQYHA-----VTEFPEAEAMEKKGNEQTEK 504
+D+ + KH++ K + EE + A V +AEA+EKK EQ EK
Sbjct: 196 QDNQKYHDEERKKHIETQKKAEENEEKRRAKEKADRDAHVARHKQAEALEKKKREQEEK 254
>AC024826-3|AAP13746.1| 343|Caenorhabditis elegans Hypothetical
protein Y55F3AM.6b protein.
Length = 343
Score = 28.3 bits (60), Expect = 6.3
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +1
Query: 670 ETMCRNFVRNTCNRGASCRYLHKI 741
ET CR F C++G +C + H +
Sbjct: 5 ETDCRYFANGYCSKGNTCTFTHDV 28
>AC024826-2|AAF60798.1| 413|Caenorhabditis elegans Hypothetical
protein Y55F3AM.6a protein.
Length = 413
Score = 28.3 bits (60), Expect = 6.3
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +1
Query: 670 ETMCRNFVRNTCNRGASCRYLHKI 741
ET CR F C++G +C + H +
Sbjct: 5 ETDCRYFANGYCSKGNTCTFTHDV 28
>Z70205-4|CAA94115.2| 528|Caenorhabditis elegans Hypothetical
protein C11H1.5 protein.
Length = 528
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/55 (23%), Positives = 26/55 (47%)
Frame = +1
Query: 574 EIVNEEYIDTSSITINIKTDPTENDGKPNDVEETMCRNFVRNTCNRGASCRYLHK 738
EI + Y+ T+ I + DP + P + C ++NTC+ G +++ +
Sbjct: 417 EITAQLYM-TNEIVQTLADDPLPVETNPECEQNKRCCKIIKNTCSDGIDPKFVKR 470
>Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical
protein F11A10.8 protein.
Length = 302
Score = 27.9 bits (59), Expect = 8.3
Identities = 7/21 (33%), Positives = 15/21 (71%)
Frame = +1
Query: 676 MCRNFVRNTCNRGASCRYLHK 738
+C++++R C +G C +LH+
Sbjct: 81 VCKHWLRGLCKKGDQCEFLHE 101
>Z49889-5|CAA90070.1| 2207|Caenorhabditis elegans Hypothetical protein
W07E11.1 protein.
Length = 2207
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +1
Query: 616 INIKTDPTENDGKPND-VEETMCRNFVRNTCNRGAS 720
+N+KTDP N P D + + + F C RG S
Sbjct: 2129 LNLKTDPRSNILTPKDKYDSDVAKVFAAGDCRRGQS 2164
>Z49868-5|CAA90032.1| 2207|Caenorhabditis elegans Hypothetical protein
W07E11.1 protein.
Length = 2207
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +1
Query: 616 INIKTDPTENDGKPND-VEETMCRNFVRNTCNRGAS 720
+N+KTDP N P D + + + F C RG S
Sbjct: 2129 LNLKTDPRSNILTPKDKYDSDVAKVFAAGDCRRGQS 2164
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,840,594
Number of Sequences: 27780
Number of extensions: 311931
Number of successful extensions: 808
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 808
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -