Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8p23
         (576 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     27   0.087
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    24   0.81 
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    23   1.4  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    21   5.7  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   7.5  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   7.5  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 27.5 bits (58), Expect = 0.087
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +2

Query: 20  PCGKHCLKFAVKRECRVIRKFYTFIIVLNGTLHCAC 127
           PC + C+K +V   CR     YTF++    TL  AC
Sbjct: 43  PCARKCVKDSVPMTCR-----YTFLLEWYHTLSKAC 73


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 24.2 bits (50), Expect = 0.81
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -3

Query: 100 NYYKSVELSNYSAFSFDCKF 41
           N Y+ + LSNY A  FDC F
Sbjct: 460 NGYRVI-LSNYDALYFDCGF 478


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +1

Query: 46  CSQKRMQSNSKVLHFYNSFKR 108
           CS+K+ +   KV+HF +  K+
Sbjct: 73  CSEKQKEMTKKVIHFLSHNKQ 93


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 6/21 (28%), Positives = 14/21 (66%)
 Frame = +1

Query: 46  CSQKRMQSNSKVLHFYNSFKR 108
           C++K+ + + K++H+    KR
Sbjct: 78  CTEKQKEGSRKIIHYLIDNKR 98


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 219 ARIINLIQFFVQSVATLYTSS 281
           A I+  +  F Q  AT+YTSS
Sbjct: 268 ALIVRALFLFFQLWATVYTSS 288


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 219 ARIINLIQFFVQSVATLYTSS 281
           A I+  +  F Q  AT+YTSS
Sbjct: 264 ALIVRALFLFFQLWATVYTSS 284


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,443
Number of Sequences: 336
Number of extensions: 2852
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14308417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)