Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8p23
(576 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016413-4|AAM29683.1| 454|Caenorhabditis elegans Hypothetical ... 33 0.15
AC006603-4|AAF39747.2| 379|Caenorhabditis elegans Hypothetical ... 31 0.78
Z78410-3|CAB01641.1| 555|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z68116-11|CAA92176.1| 317|Caenorhabditis elegans Hypothetical p... 30 1.4
Z68114-12|CAA92163.1| 317|Caenorhabditis elegans Hypothetical p... 30 1.4
Z81062-6|CAB02949.2| 320|Caenorhabditis elegans Hypothetical pr... 29 1.8
AF068709-5|AAC19250.2| 332|Caenorhabditis elegans Serpentine re... 29 1.8
AF162674-1|AAF80462.1| 575|Caenorhabditis elegans CNT-like nucl... 28 4.1
AF016413-3|AAB65256.3| 555|Caenorhabditis elegans Hypothetical ... 28 4.1
Z82090-6|CAB51468.1| 278|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z81526-10|CAB51464.1| 278|Caenorhabditis elegans Hypothetical p... 28 5.5
U14635-13|AAC46654.2| 322|Caenorhabditis elegans Hypothetical p... 28 5.5
Z98860-1|CAB11544.1| 677|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z81117-2|CAB03314.2| 343|Caenorhabditis elegans Hypothetical pr... 27 9.5
U13019-12|AAC24448.1| 316|Caenorhabditis elegans Serpentine rec... 27 9.5
>AF016413-4|AAM29683.1| 454|Caenorhabditis elegans Hypothetical
protein F27E11.2b protein.
Length = 454
Score = 33.1 bits (72), Expect = 0.15
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Frame = +1
Query: 169 IGTRPISSNGLWCCALL---PALLISYNFLYKVSPLYTLVAYVAVGLFCYS-ILFVVFIS 336
IGT P+ S W C L A L+ ++ K++ + A V G C + +F +++
Sbjct: 276 IGTTPVESVNAWACTFLGMSEAPLMVAPYIEKLTD-SEIFAIVTSGFACVAGTVFTAYVA 334
Query: 337 VSCLVLREPIYGGCIASSLVSALMNFIFNTQGL 435
+ PIY + +SL+SA M+ +N G+
Sbjct: 335 LGAC----PIY--LLTASLLSAPMSLAYNNLGI 361
>AC006603-4|AAF39747.2| 379|Caenorhabditis elegans Hypothetical
protein B0524.2 protein.
Length = 379
Score = 30.7 bits (66), Expect = 0.78
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +1
Query: 292 VGLFCYSILFVVFISVSCLVLREPIYGGCIASSLVSALMNFIFNTQGLTTSLSFSLT 462
+G + + ++F L+ R Y GC + SLV+A+ FIFN + L +SF T
Sbjct: 105 LGSYQFGAAKMIFDHGKKLMKRVERYSGCSSGSLVAAM--FIFNPEKLVFLVSFRKT 159
>Z78410-3|CAB01641.1| 555|Caenorhabditis elegans Hypothetical
protein C51E3.6 protein.
Length = 555
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/81 (22%), Positives = 39/81 (48%)
Frame = +1
Query: 286 VAVGLFCYSILFVVFISVSCLVLREPIYGGCIASSLVSALMNFIFNTQGLTTSLSFSLTA 465
V G+F + + I + +P+ GG +ASS+ + + N Q + +LS ++
Sbjct: 378 VMAGVFLIILGLITKIGALLSTIPDPLVGGVLASSMAMVVGVAVSNLQTVDMTLSRNM-G 436
Query: 466 VYLYSTMLRWSLTKFPKTYTI 528
++ +S M + K+ K + +
Sbjct: 437 IFGFSMMFGLIVPKYFKLFPV 457
>Z68116-11|CAA92176.1| 317|Caenorhabditis elegans Hypothetical
protein F17A2.8 protein.
Length = 317
Score = 29.9 bits (64), Expect = 1.4
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = +1
Query: 322 VVFISVSCLVLREPIYGGCIASSLVSALMNFIFNTQGLTTSLSFSLTAVYL 474
VV + ++CL+LR I ASS N +F QGLT + F T VY+
Sbjct: 195 VVIVPITCLLLRRKILKLLTASSDALYFQNRVF-LQGLTLQI-FGHTLVYV 243
>Z68114-12|CAA92163.1| 317|Caenorhabditis elegans Hypothetical
protein F17A2.8 protein.
Length = 317
Score = 29.9 bits (64), Expect = 1.4
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = +1
Query: 322 VVFISVSCLVLREPIYGGCIASSLVSALMNFIFNTQGLTTSLSFSLTAVYL 474
VV + ++CL+LR I ASS N +F QGLT + F T VY+
Sbjct: 195 VVIVPITCLLLRRKILKLLTASSDALYFQNRVF-LQGLTLQI-FGHTLVYV 243
>Z81062-6|CAB02949.2| 320|Caenorhabditis elegans Hypothetical
protein F15A4.7 protein.
Length = 320
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/35 (34%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = +1
Query: 235 SYNFLYKVSPLYTLVAYVAVGLFCY-SILFVVFIS 336
+Y+ L++ + + Y++VGLFC+ S+L ++ IS
Sbjct: 17 NYDILFENAIYFVTACYLSVGLFCHISLLKIILIS 51
>AF068709-5|AAC19250.2| 332|Caenorhabditis elegans Serpentine
receptor, class t protein29 protein.
Length = 332
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +1
Query: 196 GLWCCALLPALLISYNFLYKVSPLYTLVAYVAVGLFCYSIL-FVVFISVSCLVLREPI 366
GLWCC+ + A+++ N L +S TL + G Y ++ F + + +V PI
Sbjct: 117 GLWCCSCIIAMILVMNRLLDLSK-STLSTLIFEGNRTYLVMSFTILYGLYFVVFTPPI 173
>AF162674-1|AAF80462.1| 575|Caenorhabditis elegans CNT-like
nucleoside transporter protein.
Length = 575
Score = 28.3 bits (60), Expect = 4.1
Identities = 32/137 (23%), Positives = 57/137 (41%), Gaps = 4/137 (2%)
Frame = +1
Query: 169 IGTRPISSNGLWCCALL---PALLISYNFLYKVSPLYTLVAYVAVGLFCYS-ILFVVFIS 336
IGT P+ S W C L A L+ ++ K++ + A V G C + +F +++
Sbjct: 296 IGTTPVESVNAWACTFLGMSEAPLMVAPYIEKLTD-SEIFAIVTSGFACVAGTVFTAYVA 354
Query: 337 VSCLVLREPIYGGCIASSLVSALMNFIFNTQGLTTSLSFSLTAVYLYSTMLRWSLTKFPK 516
+ PIY + +SL+SA M+ + + F + T+ + P
Sbjct: 355 LGAC----PIY--LLTASLLSAPMSL------ACSKIMFP----EFFDTLCSAGVALVPT 398
Query: 517 TYTIGEAMIVTQGLTLF 567
+ IG ++V L F
Sbjct: 399 VFAIGATLVVIMSLLAF 415
>AF016413-3|AAB65256.3| 555|Caenorhabditis elegans Hypothetical
protein F27E11.2a protein.
Length = 555
Score = 28.3 bits (60), Expect = 4.1
Identities = 32/137 (23%), Positives = 57/137 (41%), Gaps = 4/137 (2%)
Frame = +1
Query: 169 IGTRPISSNGLWCCALL---PALLISYNFLYKVSPLYTLVAYVAVGLFCYS-ILFVVFIS 336
IGT P+ S W C L A L+ ++ K++ + A V G C + +F +++
Sbjct: 276 IGTTPVESVNAWACTFLGMSEAPLMVAPYIEKLTD-SEIFAIVTSGFACVAGTVFTAYVA 334
Query: 337 VSCLVLREPIYGGCIASSLVSALMNFIFNTQGLTTSLSFSLTAVYLYSTMLRWSLTKFPK 516
+ PIY + +SL+SA M+ + + F + T+ + P
Sbjct: 335 LGAC----PIY--LLTASLLSAPMSL------ACSKIMFP----EFFDTLCSAGVALVPT 378
Query: 517 TYTIGEAMIVTQGLTLF 567
+ IG ++V L F
Sbjct: 379 VFAIGATLVVIMSLLAF 395
>Z82090-6|CAB51468.1| 278|Caenorhabditis elegans Hypothetical
protein ZK337.5 protein.
Length = 278
Score = 27.9 bits (59), Expect = 5.5
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +1
Query: 61 MQSNSKVLHFYNSFKRYTSLCMSVDYTISRNLRDGGIGTRPISSNGLWCC 210
M S +++L TS+C VD+T + DG PI G CC
Sbjct: 176 MPSCAEILKDQPKVNGTTSMC--VDFTYDQEAEDGEEVDEPIKMKGRLCC 223
>Z81526-10|CAB51464.1| 278|Caenorhabditis elegans Hypothetical
protein ZK337.5 protein.
Length = 278
Score = 27.9 bits (59), Expect = 5.5
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +1
Query: 61 MQSNSKVLHFYNSFKRYTSLCMSVDYTISRNLRDGGIGTRPISSNGLWCC 210
M S +++L TS+C VD+T + DG PI G CC
Sbjct: 176 MPSCAEILKDQPKVNGTTSMC--VDFTYDQEAEDGEEVDEPIKMKGRLCC 223
>U14635-13|AAC46654.2| 322|Caenorhabditis elegans Hypothetical
protein C27H5.6 protein.
Length = 322
Score = 27.9 bits (59), Expect = 5.5
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +3
Query: 159 RWRYRNEAYLKQRVMVLCFTARIINLIQFFVQSVATLYTSSLRSCWFILLQHTVCG-IHF 335
RW +RN YL +VLC ++ I F V S A+ + R C + V G IH+
Sbjct: 131 RWTWRNRLYLSSFGIVLC---GLLTFIAFVV-SFASPSINDDRMCAVMNSTGIVYGTIHY 186
Query: 336 C 338
C
Sbjct: 187 C 187
>Z98860-1|CAB11544.1| 677|Caenorhabditis elegans Hypothetical
protein Y26G10.1 protein.
Length = 677
Score = 27.1 bits (57), Expect = 9.5
Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Frame = +1
Query: 196 GLWCCALLPALLISYNFLYKVSPLYTLVAYVAVGLFC--YSILFVVFISV--SCLVLREP 363
G+ C+L P +S NFL K + L + G FC ++ + F + +C E
Sbjct: 377 GVCVCSLAPDTSLSLNFLPKSTQLVNYNYDLRFGAFCDTNTMPCLRFDNCIRNCATCAEI 436
Query: 364 IYGGCIASSLVSALMNFIFNTQGLTTSLSFSLT 462
+ G L L NFI G+T + SF +T
Sbjct: 437 LTPGRSDLHLYYMLPNFI-KILGITITTSFLIT 468
>Z81117-2|CAB03314.2| 343|Caenorhabditis elegans Hypothetical
protein T06E6.4 protein.
Length = 343
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/108 (18%), Positives = 43/108 (39%)
Frame = +1
Query: 250 YKVSPLYTLVAYVAVGLFCYSILFVVFISVSCLVLREPIYGGCIASSLVSALMNFIFNTQ 429
Y+V+P A A+G S + +++ V +V+ + + G + L I
Sbjct: 186 YQVNPWIVRTACAAIGFLMISTCYGIWLGVHTMVILQRLRGHMSVQTYQMHLTALISLGL 245
Query: 430 GLTTSLSFSLTAVYLYSTMLRWSLTKFPKTYTIGEAMIVTQGLTLFTI 573
+ T F L VY++ ++ + + ++ T + L T+
Sbjct: 246 QMATPTVFIL-PVYMFVAVIVTDAVDMQRIVSWAPCLMSTHSMLLVTV 292
>U13019-12|AAC24448.1| 316|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 8 protein.
Length = 316
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +1
Query: 235 SYNFLYKVSPLYTLVAYVAVGLFCYS-ILFVVFI 333
SY+++ + + VAY+A +F YS IL+VV++
Sbjct: 17 SYSYVMENFKYFVQVAYLAPAVFLYSRILYVVWV 50
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,242,632
Number of Sequences: 27780
Number of extensions: 272813
Number of successful extensions: 805
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 805
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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